RNA–Protein interactions for RNA: ENST00000571058.5

RPA1-203, Transcript of replication protein A1, humanhuman

TSL 4

Gene RPA1, Length 577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-203ENST00000571058 HMOX1P09601 288 aa23.23■■□□□ 1.31
RPA1-203ENST00000571058 MAP3K5Q99683 1374 aa23.23■■□□□ 1.31
RPA1-203ENST00000571058 SCN11AQ9UI33 1791 aa23.22■■□□□ 1.31
RPA1-203ENST00000571058 MSH5O43196 834 aa23.22■■□□□ 1.31
RPA1-203ENST00000571058 ATP6V1AP38606 617 aa23.22■■□□□ 1.31
RPA1-203ENST00000571058 COL23A1Q86Y22 540 aaPredicted RBP23.22■■□□□ 1.31
RPA1-203ENST00000571058 FHDC1Q9C0D6 1143 aaPredicted RBP23.21■■□□□ 1.31
RPA1-203ENST00000571058 SYT17Q9BSW7 474 aa23.2■■□□□ 1.3
RPA1-203ENST00000571058 U2SURPO15042 1029 aaKnown RBP23.19■■□□□ 1.3
RPA1-203ENST00000571058 SSFA2P28290 1259 aa23.19■■□□□ 1.3
RPA1-203ENST00000571058 UBR3Q6ZT12 1888 aa23.19■■□□□ 1.3
RPA1-203ENST00000571058 NFATC2IPQ8NCF5 419 aa23.18■■□□□ 1.3
RPA1-203ENST00000571058 LINC00116Q8NCU8 138 aa23.18■■□□□ 1.3
RPA1-203ENST00000571058 NUDCQ9Y266 331 aa23.18■■□□□ 1.3
RPA1-203ENST00000571058 PPP2R1AP30153 589 aa23.17■■□□□ 1.3
RPA1-203ENST00000571058 ITPK1Q13572 414 aa23.17■■□□□ 1.3
RPA1-203ENST00000571058 MTHFSDQ2M296 383 aaKnown RBP23.16■■□□□ 1.3
RPA1-203ENST00000571058 RBM42Q9BTD8 480 aaKnown RBP23.16■■□□□ 1.3
RPA1-203ENST00000571058 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.15■■□□□ 1.3
RPA1-203ENST00000571058 GAS2L2Q8NHY3 880 aa23.15■■□□□ 1.3
RPA1-203ENST00000571058 SLC52A2Q9HAB3 445 aa23.15■■□□□ 1.3
RPA1-203ENST00000571058 MRC1P22897 1456 aa23.14■■□□□ 1.29
RPA1-203ENST00000571058 RC3H1Q5TC82 1133 aaKnown RBP23.14■■□□□ 1.29
RPA1-203ENST00000571058 ADAMTS7Q9UKP4 1686 aa23.13■■□□□ 1.29
RPA1-203ENST00000571058 VIRMAQ69YN4 1812 aaKnown RBP23.13■■□□□ 1.29
RPA1-203ENST00000571058 GNPATO15228 680 aa23.13■■□□□ 1.29
RPA1-203ENST00000571058 RNMTO43148 476 aaKnown RBP23.13■■□□□ 1.29
RPA1-203ENST00000571058 CNTNAP4Q9C0A0 1308 aa23.12■■□□□ 1.29
RPA1-203ENST00000571058 COL5A3P25940 1745 aaPredicted RBP23.12■■□□□ 1.29
RPA1-203ENST00000571058 SLC4A9Q96Q91 983 aa23.12■■□□□ 1.29
RPA1-203ENST00000571058 CICQ96RK0 1608 aaPredicted RBP23.11■■□□□ 1.29
RPA1-203ENST00000571058 PHF14O94880 888 aa23.11■■□□□ 1.29
RPA1-203ENST00000571058 ADRA2BP18089 450 aa23.11■■□□□ 1.29
RPA1-203ENST00000571058 LGR6Q9HBX8 967 aa23.11■■□□□ 1.29
RPA1-203ENST00000571058 RTCBQ9Y3I0 505 aaKnown RBP23.11■■□□□ 1.29
RPA1-203ENST00000571058 PTCD1O75127 700 aaKnown RBP23.1■■□□□ 1.29
RPA1-203ENST00000571058 GNAT3A8MTJ3 354 aa23.09■■□□□ 1.29
RPA1-203ENST00000571058 MSL1Q68DK7 614 aa23.09■■□□□ 1.29
RPA1-203ENST00000571058 AMIGO3Q86WK7 504 aa23.09■■□□□ 1.29
RPA1-203ENST00000571058 FCHSD2O94868 740 aa23.08■■□□□ 1.29
RPA1-203ENST00000571058 RSPH6AQ9H0K4 717 aa23.08■■□□□ 1.29
RPA1-203ENST00000571058 U2AF1L5P0DN76 240 aaPredicted RBP23.07■■□□□ 1.28
RPA1-203ENST00000571058 PRKAR2BP31323 418 aa23.07■■□□□ 1.28
RPA1-203ENST00000571058 U2AF1Q01081 240 aaKnown RBP eCLIP23.07■■□□□ 1.28
RPA1-203ENST00000571058 TRAPPC3LQ5T215 181 aa23.07■■□□□ 1.28
RPA1-203ENST00000571058 RPS6KA4O75676 772 aa23.06■■□□□ 1.28
RPA1-203ENST00000571058 KLHL34Q8N239 644 aa23.06■■□□□ 1.28
RPA1-203ENST00000571058 CD2APQ9Y5K6 639 aa23.05■■□□□ 1.28
RPA1-203ENST00000571058 TEFQ10587 303 aa23.04■■□□□ 1.28
RPA1-203ENST00000571058 MYH14Q7Z406 1995 aaKnown RBP23.03■■□□□ 1.28
RPA1-203ENST00000571058 TJP1Q07157 1748 aa23.03■■□□□ 1.28
RPA1-203ENST00000571058 CRKLP46109 303 aaKnown RBP23.03■■□□□ 1.28
RPA1-203ENST00000571058 VSIG10Q8N0Z9 540 aa23.03■■□□□ 1.28
RPA1-203ENST00000571058 RALBP1Q15311 655 aa23.02■■□□□ 1.28
RPA1-203ENST00000571058 NLGN1Q8N2Q7 840 aa23.02■■□□□ 1.28
RPA1-203ENST00000571058 PHACTR3Q96KR7 559 aa23.02■■□□□ 1.28
RPA1-203ENST00000571058 RFC4P35249 363 aa23.01■■□□□ 1.27
RPA1-203ENST00000571058 SMIM5Q71RC9 77 aa23.01■■□□□ 1.27
RPA1-203ENST00000571058 TTC5Q8N0Z6 440 aa23.01■■□□□ 1.27
RPA1-203ENST00000571058 IL17REQ8NFR9 667 aa23.01■■□□□ 1.27
RPA1-203ENST00000571058 CEMIPQ8WUJ3 1361 aa23.01■■□□□ 1.27
RPA1-203ENST00000571058 KCPQ6ZWJ8 1503 aa23■■□□□ 1.27
RPA1-203ENST00000571058 NEFMP07197 916 aa23■■□□□ 1.27
RPA1-203ENST00000571058 YY1P25490 414 aa23■■□□□ 1.27
RPA1-203ENST00000571058 SLC39A6Q13433 755 aa23■■□□□ 1.27
RPA1-203ENST00000571058 ARHGEF1Q92888 912 aaKnown RBP23■■□□□ 1.27
RPA1-203ENST00000571058 UBR2Q8IWV8 1755 aa22.99■■□□□ 1.27
RPA1-203ENST00000571058 GPR162Q16538 588 aa22.99■■□□□ 1.27
RPA1-203ENST00000571058 SIPA1L3O60292 1781 aaPredicted RBP22.99■■□□□ 1.27
RPA1-203ENST00000571058 NLGN2Q8NFZ4 835 aa22.98■■□□□ 1.27
RPA1-203ENST00000571058 RTF1Q92541 710 aaKnown RBP22.98■■□□□ 1.27
RPA1-203ENST00000571058 CCDC87Q9NVE4 849 aa22.98■■□□□ 1.27
RPA1-203ENST00000571058 HTATSF1O43719 755 aaKnown RBP22.97■■□□□ 1.27
RPA1-203ENST00000571058 DNAJC10Q8IXB1 793 aa22.97■■□□□ 1.27
RPA1-203ENST00000571058 PNNQ9H307 717 aaKnown RBP22.97■■□□□ 1.27
RPA1-203ENST00000571058 C4AP0C0L4 1744 aa22.96■■□□□ 1.27
RPA1-203ENST00000571058 CHD4Q14839 1912 aa22.96■■□□□ 1.27
RPA1-203ENST00000571058 ZEB1P37275 1124 aaPredicted RBP22.96■■□□□ 1.27
RPA1-203ENST00000571058 DDX10Q13206 875 aaKnown RBP22.96■■□□□ 1.27
RPA1-203ENST00000571058 INTS5Q6P9B9 1019 aaKnown RBP22.96■■□□□ 1.27
RPA1-203ENST00000571058 ZNF790Q6PG37 636 aa22.96■■□□□ 1.27
RPA1-203ENST00000571058 TEX13AQ9BXU3 409 aaPredicted RBP22.96■■□□□ 1.27
RPA1-203ENST00000571058 MMP10P09238 476 aa22.95■■□□□ 1.26
RPA1-203ENST00000571058 CYP19A1P11511 503 aaPredicted RBP22.95■■□□□ 1.26
RPA1-203ENST00000571058 STARD3NLO95772 234 aa22.94■■□□□ 1.26
RPA1-203ENST00000571058 GYS1P13807 737 aa22.94■■□□□ 1.26
RPA1-203ENST00000571058 USP42Q9H9J4 1324 aaKnown RBP22.93■■□□□ 1.26
RPA1-203ENST00000571058 GRIN3BO60391 1043 aa22.92■■□□□ 1.26
RPA1-203ENST00000571058 HEG1Q9ULI3 1381 aa22.91■■□□□ 1.26
RPA1-203ENST00000571058 SOS1Q07889 1333 aaPredicted RBP22.91■■□□□ 1.26
RPA1-203ENST00000571058 BTBD11A6QL63 1104 aa22.91■■□□□ 1.26
RPA1-203ENST00000571058 PELP1Q8IZL8 1130 aaKnown RBP22.91■■□□□ 1.26
RPA1-203ENST00000571058 ZNF496Q96IT1 587 aaPredicted RBP22.91■■□□□ 1.26
RPA1-203ENST00000571058 FMNL2Q96PY5 1086 aa22.91■■□□□ 1.26
RPA1-203ENST00000571058 ZPR1O75312 459 aa22.9■■□□□ 1.26
RPA1-203ENST00000571058 MYBBP1AQ9BQG0 1328 aaKnown RBP22.89■■□□□ 1.26
RPA1-203ENST00000571058 PARP3Q9Y6F1 533 aa22.89■■□□□ 1.25
RPA1-203ENST00000571058 KIF13BQ9NQT8 1826 aa22.89■■□□□ 1.25
RPA1-203ENST00000571058 UTRNP46939 3433 aa22.88■■□□□ 1.25
RPA1-203ENST00000571058 ZBTB1Q9Y2K1 713 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms