RNA–Protein interactions for RNA: ENST00000570883.5

RPAIN-207, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 953 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-207ENST00000570883 UBR2Q8IWV8 1755 aa17.98■□□□□ 0.47
RPAIN-207ENST00000570883 TJP1Q07157 1748 aa17.98■□□□□ 0.47
RPAIN-207ENST00000570883 MYH14Q7Z406 1995 aaKnown RBP17.97■□□□□ 0.47
RPAIN-207ENST00000570883 U2AF1L5P0DN76 240 aaPredicted RBP17.97■□□□□ 0.47
RPAIN-207ENST00000570883 U2AF1Q01081 240 aaKnown RBP eCLIP17.97■□□□□ 0.47
RPAIN-207ENST00000570883 PHACTR3Q96KR7 559 aa17.97■□□□□ 0.47
RPAIN-207ENST00000570883 LGR6Q9HBX8 967 aa17.97■□□□□ 0.47
RPAIN-207ENST00000570883 MAP3K5Q99683 1374 aa17.96■□□□□ 0.47
RPAIN-207ENST00000570883 LOC102724428A0A0B4J2F2 783 aa17.96■□□□□ 0.47
RPAIN-207ENST00000570883 SIK1P57059 783 aa17.96■□□□□ 0.47
RPAIN-207ENST00000570883 CABP4P57796 275 aa17.96■□□□□ 0.47
RPAIN-207ENST00000570883 PNPLA7Q6ZV29 1317 aa17.96■□□□□ 0.46
RPAIN-207ENST00000570883 RNMTO43148 476 aaKnown RBP17.95■□□□□ 0.46
RPAIN-207ENST00000570883 ZBTB7AO95365 584 aa17.95■□□□□ 0.46
RPAIN-207ENST00000570883 NFATC2IPQ8NCF5 419 aa17.95■□□□□ 0.46
RPAIN-207ENST00000570883 ITPK1Q13572 414 aa17.94■□□□□ 0.46
RPAIN-207ENST00000570883 SLC4A9Q96Q91 983 aa17.94■□□□□ 0.46
RPAIN-207ENST00000570883 MYBBP1AQ9BQG0 1328 aaKnown RBP17.94■□□□□ 0.46
RPAIN-207ENST00000570883 FCHSD2O94868 740 aa17.93■□□□□ 0.46
RPAIN-207ENST00000570883 LINC00116Q8NCU8 138 aa17.93■□□□□ 0.46
RPAIN-207ENST00000570883 GAS2L2Q8NHY3 880 aa17.93■□□□□ 0.46
RPAIN-207ENST00000570883 SLC52A2Q9HAB3 445 aa17.93■□□□□ 0.46
RPAIN-207ENST00000570883 SPON1Q9HCB6 807 aa17.93■□□□□ 0.46
RPAIN-207ENST00000570883 TFCP2L1Q9NZI6 479 aa17.93■□□□□ 0.46
RPAIN-207ENST00000570883 KCPQ6ZWJ8 1503 aa17.92■□□□□ 0.46
RPAIN-207ENST00000570883 ZNF316A6NFI3 1004 aaPredicted RBP17.91■□□□□ 0.46
RPAIN-207ENST00000570883 AMIGO3Q86WK7 504 aa17.91■□□□□ 0.46
RPAIN-207ENST00000570883 PRKRIP1Q9H875 184 aaPredicted RBP17.91■□□□□ 0.46
RPAIN-207ENST00000570883 GNAT3A8MTJ3 354 aa17.9■□□□□ 0.46
RPAIN-207ENST00000570883 ATP6V1AP38606 617 aa17.9■□□□□ 0.46
RPAIN-207ENST00000570883 PTGER2P43116 358 aa17.9■□□□□ 0.46
RPAIN-207ENST00000570883 IL17REQ8NFR9 667 aa17.9■□□□□ 0.46
RPAIN-207ENST00000570883 ATF5Q9Y2D1 282 aaPredicted RBP17.9■□□□□ 0.46
RPAIN-207ENST00000570883 CEMIPQ8WUJ3 1361 aa17.9■□□□□ 0.46
RPAIN-207ENST00000570883 C4AP0C0L4 1744 aa17.89■□□□□ 0.46
RPAIN-207ENST00000570883 SGIP1Q9BQI5 828 aa17.89■□□□□ 0.45
RPAIN-207ENST00000570883 RBM42Q9BTD8 480 aaKnown RBP17.89■□□□□ 0.45
RPAIN-207ENST00000570883 MTFR1LQ9H019 292 aa17.89■□□□□ 0.45
RPAIN-207ENST00000570883 PTCD1O75127 700 aaKnown RBP17.88■□□□□ 0.45
RPAIN-207ENST00000570883 SMIM5Q71RC9 77 aa17.88■□□□□ 0.45
RPAIN-207ENST00000570883 COL23A1Q86Y22 540 aaPredicted RBP17.88■□□□□ 0.45
RPAIN-207ENST00000570883 PLEKHF1Q96S99 279 aa17.88■□□□□ 0.45
RPAIN-207ENST00000570883 SLC39A6Q13433 755 aa17.87■□□□□ 0.45
RPAIN-207ENST00000570883 AK7Q96M32 723 aa17.87■□□□□ 0.45
RPAIN-207ENST00000570883 HMGB2P26583 209 aaKnown RBP17.85■□□□□ 0.45
RPAIN-207ENST00000570883 SLC16A10Q8TF71 515 aa17.85■□□□□ 0.45
RPAIN-207ENST00000570883 CNTNAP4Q9C0A0 1308 aa17.84■□□□□ 0.45
RPAIN-207ENST00000570883 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.83■□□□□ 0.44
RPAIN-207ENST00000570883 GNPATO15228 680 aa17.83■□□□□ 0.44
RPAIN-207ENST00000570883 PHF14O94880 888 aa17.83■□□□□ 0.44
RPAIN-207ENST00000570883 TEFQ10587 303 aa17.83■□□□□ 0.44
RPAIN-207ENST00000570883 MCM10Q7L590 875 aa17.83■□□□□ 0.44
RPAIN-207ENST00000570883 PPP1R1BQ9UD71 204 aaPredicted RBP17.83■□□□□ 0.44
RPAIN-207ENST00000570883 KDM3BQ7LBC6 1761 aa17.83■□□□□ 0.44
RPAIN-207ENST00000570883 SSFA2P28290 1259 aa17.82■□□□□ 0.44
RPAIN-207ENST00000570883 DCTN1Q14203 1278 aa17.82■□□□□ 0.44
RPAIN-207ENST00000570883 MSH5O43196 834 aa17.81■□□□□ 0.44
RPAIN-207ENST00000570883 FLAD1Q8NFF5 587 aa17.81■□□□□ 0.44
RPAIN-207ENST00000570883 CRKLP46109 303 aaKnown RBP17.8■□□□□ 0.44
RPAIN-207ENST00000570883 NFE2L2Q16236 605 aa17.8■□□□□ 0.44
RPAIN-207ENST00000570883 RC3H1Q5TC82 1133 aaKnown RBP17.8■□□□□ 0.44
RPAIN-207ENST00000570883 MSL1Q68DK7 614 aa17.8■□□□□ 0.44
RPAIN-207ENST00000570883 DNAJC10Q8IXB1 793 aa17.8■□□□□ 0.44
RPAIN-207ENST00000570883 HTATSF1O43719 755 aaKnown RBP17.79■□□□□ 0.44
RPAIN-207ENST00000570883 ZNF790Q6PG37 636 aa17.79■□□□□ 0.44
RPAIN-207ENST00000570883 RTF1Q92541 710 aaKnown RBP17.79■□□□□ 0.44
RPAIN-207ENST00000570883 ZNF496Q96IT1 587 aaPredicted RBP17.79■□□□□ 0.44
RPAIN-207ENST00000570883 MAPK8IP3Q9UPT6 1336 aa17.78■□□□□ 0.44
RPAIN-207ENST00000570883 KCNQ3O43525 872 aa17.78■□□□□ 0.44
RPAIN-207ENST00000570883 NEFMP07197 916 aa17.78■□□□□ 0.44
RPAIN-207ENST00000570883 ARXQ96QS3 562 aa17.78■□□□□ 0.44
RPAIN-207ENST00000570883 LAMB4A4D0S4 1761 aa17.78■□□□□ 0.44
RPAIN-207ENST00000570883 INTS5Q6P9B9 1019 aaKnown RBP17.77■□□□□ 0.44
RPAIN-207ENST00000570883 TTC5Q8N0Z6 440 aa17.77■□□□□ 0.44
RPAIN-207ENST00000570883 PNNQ9H307 717 aaKnown RBP17.77■□□□□ 0.44
RPAIN-207ENST00000570883 RTCBQ9Y3I0 505 aaKnown RBP17.77■□□□□ 0.44
RPAIN-207ENST00000570883 HEG1Q9ULI3 1381 aa17.77■□□□□ 0.43
RPAIN-207ENST00000570883 BTBD11A6QL63 1104 aa17.76■□□□□ 0.43
RPAIN-207ENST00000570883 RPS6KA4O75676 772 aa17.76■□□□□ 0.43
RPAIN-207ENST00000570883 CYP19A1P11511 503 aaPredicted RBP17.76■□□□□ 0.43
RPAIN-207ENST00000570883 CCDC184Q52MB2 194 aa17.76■□□□□ 0.43
RPAIN-207ENST00000570883 CCDC146Q8IYE0 955 aa17.76■□□□□ 0.43
RPAIN-207ENST00000570883 VSIG10Q8N0Z9 540 aa17.76■□□□□ 0.43
RPAIN-207ENST00000570883 THUMPD2Q9BTF0 503 aaKnown RBP17.76■□□□□ 0.43
RPAIN-207ENST00000570883 FHDC1Q9C0D6 1143 aaPredicted RBP17.76■□□□□ 0.43
RPAIN-207ENST00000570883 POLD1P28340 1107 aa17.75■□□□□ 0.43
RPAIN-207ENST00000570883 WDR43Q15061 677 aaKnown RBP eCLIP17.75■□□□□ 0.43
RPAIN-207ENST00000570883 ARHGEF1Q92888 912 aaKnown RBP17.75■□□□□ 0.43
RPAIN-207ENST00000570883 CCDC87Q9NVE4 849 aa17.75■□□□□ 0.43
RPAIN-207ENST00000570883 ADAMTS8Q9UP79 889 aa17.75■□□□□ 0.43
RPAIN-207ENST00000570883 GOLGB1Q14789 3259 aaKnown RBP17.74■□□□□ 0.43
RPAIN-207ENST00000570883 ADRA2BP18089 450 aa17.74■□□□□ 0.43
RPAIN-207ENST00000570883 KIF13BQ9NQT8 1826 aa17.73■□□□□ 0.43
RPAIN-207ENST00000570883 TMPOP42166 694 aaKnown RBP17.73■□□□□ 0.43
RPAIN-207ENST00000570883 TRAPPC3LQ5T215 181 aa17.73■□□□□ 0.43
RPAIN-207ENST00000570883 SYT17Q9BSW7 474 aa17.73■□□□□ 0.43
RPAIN-207ENST00000570883 ZBTB1Q9Y2K1 713 aa17.73■□□□□ 0.43
RPAIN-207ENST00000570883 SOS1Q07889 1333 aaPredicted RBP17.72■□□□□ 0.43
RPAIN-207ENST00000570883 SCN7AQ01118 1682 aa17.72■□□□□ 0.43
RPAIN-207ENST00000570883 FMNL2Q96PY5 1086 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms