RNA–Protein interactions for RNA: ENST00000570758.1

CHD3-212, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 174 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-212ENST00000570758 U2SURPO15042 1029 aaKnown RBP7.3□□□□□ -1.24
CHD3-212ENST00000570758 PPP2R1AP30153 589 aa7.3□□□□□ -1.24
CHD3-212ENST00000570758 CABP4P57796 275 aa7.3□□□□□ -1.24
CHD3-212ENST00000570758 MTHFSDQ2M296 383 aaKnown RBP7.3□□□□□ -1.24
CHD3-212ENST00000570758 AKAP4Q5JQC9 854 aa7.3□□□□□ -1.24
CHD3-212ENST00000570758 MSL1Q68DK7 614 aa7.3□□□□□ -1.24
CHD3-212ENST00000570758 AK7Q96M32 723 aa7.3□□□□□ -1.24
CHD3-212ENST00000570758 LGR6Q9HBX8 967 aa7.3□□□□□ -1.24
CHD3-212ENST00000570758 RNMTO43148 476 aaKnown RBP7.29□□□□□ -1.24
CHD3-212ENST00000570758 PHF14O94880 888 aa7.29□□□□□ -1.24
CHD3-212ENST00000570758 ATP6V1AP38606 617 aa7.29□□□□□ -1.24
CHD3-212ENST00000570758 NFATC2IPQ8NCF5 419 aa7.29□□□□□ -1.24
CHD3-212ENST00000570758 SYT17Q9BSW7 474 aa7.29□□□□□ -1.24
CHD3-212ENST00000570758 RBM42Q9BTD8 480 aaKnown RBP7.29□□□□□ -1.24
CHD3-212ENST00000570758 UBR3Q6ZT12 1888 aa7.28□□□□□ -1.24
CHD3-212ENST00000570758 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP7.28□□□□□ -1.24
CHD3-212ENST00000570758 PTCD1O75127 700 aaKnown RBP7.28□□□□□ -1.24
CHD3-212ENST00000570758 POLD1P28340 1107 aa7.28□□□□□ -1.24
CHD3-212ENST00000570758 FLAD1Q8NFF5 587 aa7.28□□□□□ -1.24
CHD3-212ENST00000570758 CFAP53Q96M91 514 aa7.28□□□□□ -1.24
CHD3-212ENST00000570758 MRC1P22897 1456 aa7.28□□□□□ -1.24
CHD3-212ENST00000570758 SCN11AQ9UI33 1791 aa7.28□□□□□ -1.24
CHD3-212ENST00000570758 GNPATO15228 680 aa7.27□□□□□ -1.25
CHD3-212ENST00000570758 HMGB2P26583 209 aaKnown RBP7.27□□□□□ -1.25
CHD3-212ENST00000570758 SSFA2P28290 1259 aa7.27□□□□□ -1.25
CHD3-212ENST00000570758 SLC39A6Q13433 755 aa7.27□□□□□ -1.25
CHD3-212ENST00000570758 KLHL34Q8N239 644 aa7.27□□□□□ -1.25
CHD3-212ENST00000570758 PHACTR3Q96KR7 559 aa7.27□□□□□ -1.25
CHD3-212ENST00000570758 RSPH6AQ9H0K4 717 aa7.27□□□□□ -1.25
CHD3-212ENST00000570758 SLC52A2Q9HAB3 445 aa7.27□□□□□ -1.25
CHD3-212ENST00000570758 MAP3K5Q99683 1374 aa7.27□□□□□ -1.25
CHD3-212ENST00000570758 ZNF831Q5JPB2 1677 aa7.27□□□□□ -1.25
CHD3-212ENST00000570758 ADAMTS7Q9UKP4 1686 aa7.27□□□□□ -1.25
CHD3-212ENST00000570758 CNTNAP4Q9C0A0 1308 aa7.27□□□□□ -1.25
CHD3-212ENST00000570758 U2AF1L5P0DN76 240 aaPredicted RBP7.26□□□□□ -1.25
CHD3-212ENST00000570758 PRKAR2BP31323 418 aa7.26□□□□□ -1.25
CHD3-212ENST00000570758 U2AF1Q01081 240 aaKnown RBP eCLIP7.26□□□□□ -1.25
CHD3-212ENST00000570758 RC3H1Q5TC82 1133 aaKnown RBP7.26□□□□□ -1.25
CHD3-212ENST00000570758 IL17REQ8NFR9 667 aa7.26□□□□□ -1.25
CHD3-212ENST00000570758 NLGN2Q8NFZ4 835 aa7.26□□□□□ -1.25
CHD3-212ENST00000570758 GAS2L2Q8NHY3 880 aa7.26□□□□□ -1.25
CHD3-212ENST00000570758 TJP1Q07157 1748 aa7.26□□□□□ -1.25
CHD3-212ENST00000570758 COL5A3P25940 1745 aaPredicted RBP7.25□□□□□ -1.25
CHD3-212ENST00000570758 RPS6KA4O75676 772 aa7.25□□□□□ -1.25
CHD3-212ENST00000570758 DDX10Q13206 875 aaKnown RBP7.25□□□□□ -1.25
CHD3-212ENST00000570758 INTS5Q6P9B9 1019 aaKnown RBP7.25□□□□□ -1.25
CHD3-212ENST00000570758 DNAJC10Q8IXB1 793 aa7.25□□□□□ -1.25
CHD3-212ENST00000570758 ARHGEF1Q92888 912 aaKnown RBP7.25□□□□□ -1.25
CHD3-212ENST00000570758 NUDCQ9Y266 331 aa7.25□□□□□ -1.25
CHD3-212ENST00000570758 RTCBQ9Y3I0 505 aaKnown RBP7.25□□□□□ -1.25
CHD3-212ENST00000570758 KCPQ6ZWJ8 1503 aa7.25□□□□□ -1.25
CHD3-212ENST00000570758 VIRMAQ69YN4 1812 aaKnown RBP7.24□□□□□ -1.25
CHD3-212ENST00000570758 MYH14Q7Z406 1995 aaKnown RBP7.24□□□□□ -1.25
CHD3-212ENST00000570758 DCAF8L1A6NGE4 600 aa7.24□□□□□ -1.25
CHD3-212ENST00000570758 GNAT3A8MTJ3 354 aa7.24□□□□□ -1.25
CHD3-212ENST00000570758 CRKLP46109 303 aaKnown RBP7.24□□□□□ -1.25
CHD3-212ENST00000570758 CICQ96RK0 1608 aaPredicted RBP7.23□□□□□ -1.25
CHD3-212ENST00000570758 CEMIPQ8WUJ3 1361 aa7.23□□□□□ -1.25
CHD3-212ENST00000570758 KCNQ3O43525 872 aa7.23□□□□□ -1.25
CHD3-212ENST00000570758 FCHSD2O94868 740 aa7.23□□□□□ -1.25
CHD3-212ENST00000570758 CYP19A1P11511 503 aaPredicted RBP7.23□□□□□ -1.25
CHD3-212ENST00000570758 YY1P25490 414 aa7.23□□□□□ -1.25
CHD3-212ENST00000570758 TEFQ10587 303 aa7.23□□□□□ -1.25
CHD3-212ENST00000570758 TRAPPC3LQ5T215 181 aa7.23□□□□□ -1.25
CHD3-212ENST00000570758 SRP68Q9UHB9 627 aaKnown RBP7.23□□□□□ -1.25
CHD3-212ENST00000570758 MMP10P09238 476 aa7.22□□□□□ -1.25
CHD3-212ENST00000570758 GYS1P13807 737 aa7.22□□□□□ -1.25
CHD3-212ENST00000570758 YBX3P16989 372 aaKnown RBP eCLIP7.22□□□□□ -1.25
CHD3-212ENST00000570758 ADRA2BP18089 450 aa7.22□□□□□ -1.25
CHD3-212ENST00000570758 RFC4P35249 363 aa7.22□□□□□ -1.25
CHD3-212ENST00000570758 DCTN1Q14203 1278 aa7.22□□□□□ -1.25
CHD3-212ENST00000570758 GPR162Q16538 588 aa7.22□□□□□ -1.25
CHD3-212ENST00000570758 MCM10Q7L590 875 aa7.22□□□□□ -1.25
CHD3-212ENST00000570758 PELP1Q8IZL8 1130 aaKnown RBP7.22□□□□□ -1.25
CHD3-212ENST00000570758 ZNF496Q96IT1 587 aaPredicted RBP7.22□□□□□ -1.25
CHD3-212ENST00000570758 CCDC87Q9NVE4 849 aa7.22□□□□□ -1.25
CHD3-212ENST00000570758 CD2APQ9Y5K6 639 aa7.22□□□□□ -1.25
CHD3-212ENST00000570758 SIPA1L3O60292 1781 aaPredicted RBP7.22□□□□□ -1.25
CHD3-212ENST00000570758 UBR2Q8IWV8 1755 aa7.22□□□□□ -1.25
CHD3-212ENST00000570758 SOS1Q07889 1333 aaPredicted RBP7.22□□□□□ -1.25
CHD3-212ENST00000570758 C4AP0C0L4 1744 aa7.21□□□□□ -1.25
CHD3-212ENST00000570758 FKBP8Q14318 412 aa7.21□□□□□ -1.26
CHD3-212ENST00000570758 RALBP1Q15311 655 aa7.21□□□□□ -1.26
CHD3-212ENST00000570758 ZNF790Q6PG37 636 aa7.21□□□□□ -1.26
CHD3-212ENST00000570758 VSIG10Q8N0Z9 540 aa7.21□□□□□ -1.26
CHD3-212ENST00000570758 NLGN1Q8N2Q7 840 aa7.21□□□□□ -1.26
CHD3-212ENST00000570758 PLEKHF1Q96S99 279 aa7.21□□□□□ -1.26
CHD3-212ENST00000570758 ZBTB1Q9Y2K1 713 aa7.21□□□□□ -1.26
CHD3-212ENST00000570758 USP42Q9H9J4 1324 aaKnown RBP7.21□□□□□ -1.26
CHD3-212ENST00000570758 HEG1Q9ULI3 1381 aa7.2□□□□□ -1.26
CHD3-212ENST00000570758 BTBD11A6QL63 1104 aa7.2□□□□□ -1.26
CHD3-212ENST00000570758 CANXP27824 592 aaKnown RBP7.2□□□□□ -1.26
CHD3-212ENST00000570758 DDR1Q08345 913 aa7.2□□□□□ -1.26
CHD3-212ENST00000570758 TTC5Q8N0Z6 440 aa7.2□□□□□ -1.26
CHD3-212ENST00000570758 RTF1Q92541 710 aaKnown RBP7.2□□□□□ -1.26
CHD3-212ENST00000570758 WWC3Q9ULE0 1092 aa7.2□□□□□ -1.26
CHD3-212ENST00000570758 PRAMEF22A3QJZ6 481 aa7.19□□□□□ -1.26
CHD3-212ENST00000570758 HTATSF1O43719 755 aaKnown RBP7.19□□□□□ -1.26
CHD3-212ENST00000570758 NFE2L2Q16236 605 aa7.19□□□□□ -1.26
CHD3-212ENST00000570758 USPL1Q5W0Q7 1092 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms