RNA–Protein interactions for RNA: ENST00000570557.5

CHRNB1-203, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 5

Gene CHRNB1, Length 947 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-203ENST00000570557 LOC102724428A0A0B4J2F2 783 aa17.35■□□□□ 0.37
CHRNB1-203ENST00000570557 ZNF316A6NFI3 1004 aaPredicted RBP17.35■□□□□ 0.37
CHRNB1-203ENST00000570557 SIK1P57059 783 aa17.35■□□□□ 0.37
CHRNB1-203ENST00000570557 NFATC2IPQ8NCF5 419 aa17.35■□□□□ 0.37
CHRNB1-203ENST00000570557 GAS2L2Q8NHY3 880 aa17.35■□□□□ 0.37
CHRNB1-203ENST00000570557 SLC4A9Q96Q91 983 aa17.35■□□□□ 0.37
CHRNB1-203ENST00000570557 MYBBP1AQ9BQG0 1328 aaKnown RBP17.35■□□□□ 0.37
CHRNB1-203ENST00000570557 C4BP0C0L5 1744 aa17.34■□□□□ 0.37
CHRNB1-203ENST00000570557 HMGB2P26583 209 aaKnown RBP17.34■□□□□ 0.37
CHRNB1-203ENST00000570557 PNPLA7Q6ZV29 1317 aa17.34■□□□□ 0.37
CHRNB1-203ENST00000570557 PRKRIP1Q9H875 184 aaPredicted RBP17.34■□□□□ 0.37
CHRNB1-203ENST00000570557 SLC52A2Q9HAB3 445 aa17.34■□□□□ 0.37
CHRNB1-203ENST00000570557 COL24A1Q17RW2 1714 aa17.33■□□□□ 0.37
CHRNB1-203ENST00000570557 ITPK1Q13572 414 aa17.33■□□□□ 0.36
CHRNB1-203ENST00000570557 SIPA1L3O60292 1781 aaPredicted RBP17.33■□□□□ 0.36
CHRNB1-203ENST00000570557 CICQ96RK0 1608 aaPredicted RBP17.32■□□□□ 0.36
CHRNB1-203ENST00000570557 MAP3K5Q99683 1374 aa17.32■□□□□ 0.36
CHRNB1-203ENST00000570557 GNAT3A8MTJ3 354 aa17.32■□□□□ 0.36
CHRNB1-203ENST00000570557 IL17REQ8NFR9 667 aa17.32■□□□□ 0.36
CHRNB1-203ENST00000570557 PLEKHF1Q96S99 279 aa17.32■□□□□ 0.36
CHRNB1-203ENST00000570557 UBR3Q6ZT12 1888 aa17.31■□□□□ 0.36
CHRNB1-203ENST00000570557 CEMIPQ8WUJ3 1361 aa17.31■□□□□ 0.36
CHRNB1-203ENST00000570557 COL5A3P25940 1745 aaPredicted RBP17.31■□□□□ 0.36
CHRNB1-203ENST00000570557 PTGER2P43116 358 aa17.31■□□□□ 0.36
CHRNB1-203ENST00000570557 LINC00116Q8NCU8 138 aa17.31■□□□□ 0.36
CHRNB1-203ENST00000570557 SGIP1Q9BQI5 828 aa17.31■□□□□ 0.36
CHRNB1-203ENST00000570557 SPON1Q9HCB6 807 aa17.31■□□□□ 0.36
CHRNB1-203ENST00000570557 MTFR1LQ9H019 292 aa17.3■□□□□ 0.36
CHRNB1-203ENST00000570557 TFCP2L1Q9NZI6 479 aa17.3■□□□□ 0.36
CHRNB1-203ENST00000570557 ZBTB7AO95365 584 aa17.29■□□□□ 0.36
CHRNB1-203ENST00000570557 ATP6V1AP38606 617 aa17.29■□□□□ 0.36
CHRNB1-203ENST00000570557 SLC16A10Q8TF71 515 aa17.29■□□□□ 0.36
CHRNB1-203ENST00000570557 UBR2Q8IWV8 1755 aa17.28■□□□□ 0.36
CHRNB1-203ENST00000570557 AMIGO3Q86WK7 504 aa17.28■□□□□ 0.36
CHRNB1-203ENST00000570557 COL23A1Q86Y22 540 aaPredicted RBP17.28■□□□□ 0.36
CHRNB1-203ENST00000570557 TJP1Q07157 1748 aa17.27■□□□□ 0.36
CHRNB1-203ENST00000570557 KCPQ6ZWJ8 1503 aa17.27■□□□□ 0.36
CHRNB1-203ENST00000570557 HTATSF1O43719 755 aaKnown RBP17.27■□□□□ 0.36
CHRNB1-203ENST00000570557 MYH14Q7Z406 1995 aaKnown RBP17.27■□□□□ 0.36
CHRNB1-203ENST00000570557 DLG5Q8TDM6 1919 aa17.27■□□□□ 0.35
CHRNB1-203ENST00000570557 RC3H1Q5TC82 1133 aaKnown RBP17.26■□□□□ 0.35
CHRNB1-203ENST00000570557 ATF5Q9Y2D1 282 aaPredicted RBP17.26■□□□□ 0.35
CHRNB1-203ENST00000570557 SLC39A6Q13433 755 aa17.25■□□□□ 0.35
CHRNB1-203ENST00000570557 FLAD1Q8NFF5 587 aa17.25■□□□□ 0.35
CHRNB1-203ENST00000570557 RBM42Q9BTD8 480 aaKnown RBP17.25■□□□□ 0.35
CHRNB1-203ENST00000570557 PTCD1O75127 700 aaKnown RBP17.24■□□□□ 0.35
CHRNB1-203ENST00000570557 CNTNAP4Q9C0A0 1308 aa17.23■□□□□ 0.35
CHRNB1-203ENST00000570557 SSFA2P28290 1259 aa17.23■□□□□ 0.35
CHRNB1-203ENST00000570557 AK7Q96M32 723 aa17.23■□□□□ 0.35
CHRNB1-203ENST00000570557 PNNQ9H307 717 aaKnown RBP17.23■□□□□ 0.35
CHRNB1-203ENST00000570557 TEFQ10587 303 aa17.22■□□□□ 0.35
CHRNB1-203ENST00000570557 NFE2L2Q16236 605 aa17.22■□□□□ 0.35
CHRNB1-203ENST00000570557 VSIG10Q8N0Z9 540 aa17.22■□□□□ 0.35
CHRNB1-203ENST00000570557 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.21■□□□□ 0.35
CHRNB1-203ENST00000570557 ZNF790Q6PG37 636 aa17.21■□□□□ 0.35
CHRNB1-203ENST00000570557 SMIM5Q71RC9 77 aa17.21■□□□□ 0.35
CHRNB1-203ENST00000570557 MCM10Q7L590 875 aa17.21■□□□□ 0.35
CHRNB1-203ENST00000570557 GNPATO15228 680 aa17.2■□□□□ 0.34
CHRNB1-203ENST00000570557 RPS6KA4O75676 772 aa17.19■□□□□ 0.34
CHRNB1-203ENST00000570557 DCTN1Q14203 1278 aa17.19■□□□□ 0.34
CHRNB1-203ENST00000570557 INTS5Q6P9B9 1019 aaKnown RBP17.19■□□□□ 0.34
CHRNB1-203ENST00000570557 DNAJC10Q8IXB1 793 aa17.19■□□□□ 0.34
CHRNB1-203ENST00000570557 RTF1Q92541 710 aaKnown RBP17.19■□□□□ 0.34
CHRNB1-203ENST00000570557 ZNF496Q96IT1 587 aaPredicted RBP17.19■□□□□ 0.34
CHRNB1-203ENST00000570557 NEFMP07197 916 aa17.18■□□□□ 0.34
CHRNB1-203ENST00000570557 CYP19A1P11511 503 aaPredicted RBP17.18■□□□□ 0.34
CHRNB1-203ENST00000570557 CRKLP46109 303 aaKnown RBP17.18■□□□□ 0.34
CHRNB1-203ENST00000570557 ADAMTS8Q9UP79 889 aa17.18■□□□□ 0.34
CHRNB1-203ENST00000570557 HEG1Q9ULI3 1381 aa17.17■□□□□ 0.34
CHRNB1-203ENST00000570557 BTBD11A6QL63 1104 aa17.17■□□□□ 0.34
CHRNB1-203ENST00000570557 KCNQ3O43525 872 aa17.17■□□□□ 0.34
CHRNB1-203ENST00000570557 ADRA2BP18089 450 aa17.17■□□□□ 0.34
CHRNB1-203ENST00000570557 RTCBQ9Y3I0 505 aaKnown RBP17.17■□□□□ 0.34
CHRNB1-203ENST00000570557 PHF14O94880 888 aa17.16■□□□□ 0.34
CHRNB1-203ENST00000570557 CCDC184Q52MB2 194 aa17.16■□□□□ 0.34
CHRNB1-203ENST00000570557 TTC5Q8N0Z6 440 aa17.16■□□□□ 0.34
CHRNB1-203ENST00000570557 ARHGEF1Q92888 912 aaKnown RBP17.16■□□□□ 0.34
CHRNB1-203ENST00000570557 ARXQ96QS3 562 aa17.16■□□□□ 0.34
CHRNB1-203ENST00000570557 PPP1R1BQ9UD71 204 aaPredicted RBP17.16■□□□□ 0.34
CHRNB1-203ENST00000570557 MAPK8IP3Q9UPT6 1336 aa17.16■□□□□ 0.34
CHRNB1-203ENST00000570557 C4AP0C0L4 1744 aa17.16■□□□□ 0.34
CHRNB1-203ENST00000570557 MSH5O43196 834 aa17.15■□□□□ 0.34
CHRNB1-203ENST00000570557 TMPOP42166 694 aaKnown RBP17.15■□□□□ 0.34
CHRNB1-203ENST00000570557 TAF7Q15545 349 aaPredicted RBP17.15■□□□□ 0.34
CHRNB1-203ENST00000570557 TRAPPC3LQ5T215 181 aa17.15■□□□□ 0.34
CHRNB1-203ENST00000570557 RUNDC1Q96C34 613 aa17.15■□□□□ 0.34
CHRNB1-203ENST00000570557 KDM3BQ7LBC6 1761 aa17.15■□□□□ 0.34
CHRNB1-203ENST00000570557 POLD1P28340 1107 aa17.14■□□□□ 0.33
CHRNB1-203ENST00000570557 WDR43Q15061 677 aaKnown RBP eCLIP17.14■□□□□ 0.33
CHRNB1-203ENST00000570557 FMNL2Q96PY5 1086 aa17.14■□□□□ 0.33
CHRNB1-203ENST00000570557 CCDC87Q9NVE4 849 aa17.14■□□□□ 0.33
CHRNB1-203ENST00000570557 RIPK4P57078 832 aa17.13■□□□□ 0.33
CHRNB1-203ENST00000570557 MSL1Q68DK7 614 aa17.13■□□□□ 0.33
CHRNB1-203ENST00000570557 SYT17Q9BSW7 474 aa17.13■□□□□ 0.33
CHRNB1-203ENST00000570557 TEX13AQ9BXU3 409 aaPredicted RBP17.13■□□□□ 0.33
CHRNB1-203ENST00000570557 FHDC1Q9C0D6 1143 aaPredicted RBP17.13■□□□□ 0.33
CHRNB1-203ENST00000570557 SOS1Q07889 1333 aaPredicted RBP17.13■□□□□ 0.33
CHRNB1-203ENST00000570557 CCDC146Q8IYE0 955 aa17.12■□□□□ 0.33
CHRNB1-203ENST00000570557 THUMPD2Q9BTF0 503 aaKnown RBP17.12■□□□□ 0.33
CHRNB1-203ENST00000570557 TRIM35Q9UPQ4 493 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms