RNA–Protein interactions for RNA: ENST00000570514.5

TRAP1-204, Transcript of TNF receptor associated protein 1, humanhuman

TSL 2

Gene TRAP1, Length 412 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAP1-204ENST00000570514 TSR2Q969E8 191 aaKnown RBP12.56□□□□□ -0.4
TRAP1-204ENST00000570514 SUPT16HQ9Y5B9 1047 aaKnown RBP12.56□□□□□ -0.4
TRAP1-204ENST00000570514 AFF2P51816 1311 aa12.56□□□□□ -0.4
TRAP1-204ENST00000570514 BCL9O00512 1426 aa12.55□□□□□ -0.4
TRAP1-204ENST00000570514 KDM6AO15550 1401 aaPredicted RBP12.55□□□□□ -0.4
TRAP1-204ENST00000570514 ONECUT3O60422 494 aaPredicted RBP12.55□□□□□ -0.4
TRAP1-204ENST00000570514 HMGB2P26583 209 aaKnown RBP12.55□□□□□ -0.4
TRAP1-204ENST00000570514 RARSP54136 660 aaKnown RBP12.55□□□□□ -0.4
TRAP1-204ENST00000570514 RRP1P56182 461 aaKnown RBP12.55□□□□□ -0.4
TRAP1-204ENST00000570514 CABP4P57796 275 aa12.55□□□□□ -0.4
TRAP1-204ENST00000570514 AAMPQ13685 434 aa12.55□□□□□ -0.4
TRAP1-204ENST00000570514 GJD4Q96KN9 370 aaPredicted RBP12.55□□□□□ -0.4
TRAP1-204ENST00000570514 PDE3AQ14432 1141 aa12.54□□□□□ -0.4
TRAP1-204ENST00000570514 TTC5Q8N0Z6 440 aa12.54□□□□□ -0.4
TRAP1-204ENST00000570514 ARHGAP45Q92619 1136 aa12.54□□□□□ -0.4
TRAP1-204ENST00000570514 LGR6Q9HBX8 967 aa12.54□□□□□ -0.4
TRAP1-204ENST00000570514 SIPA1L3O60292 1781 aaPredicted RBP12.53□□□□□ -0.4
TRAP1-204ENST00000570514 KDM3BQ7LBC6 1761 aa12.53□□□□□ -0.4
TRAP1-204ENST00000570514 VAMP4O75379 141 aa12.53□□□□□ -0.4
TRAP1-204ENST00000570514 CCDC30Q5VVM6 783 aa12.53□□□□□ -0.4
TRAP1-204ENST00000570514 DDX54Q8TDD1 881 aaKnown RBP12.53□□□□□ -0.4
TRAP1-204ENST00000570514 CHMP4BQ9H444 224 aaKnown RBP12.53□□□□□ -0.4
TRAP1-204ENST00000570514 SHANK3Q9BYB0 1731 aa12.53□□□□□ -0.4
TRAP1-204ENST00000570514 THSD7AQ9UPZ6 1657 aa12.52□□□□□ -0.4
TRAP1-204ENST00000570514 ZNF790Q6PG37 636 aa12.52□□□□□ -0.41
TRAP1-204ENST00000570514 STK31Q9BXU1 1019 aa12.52□□□□□ -0.41
TRAP1-204ENST00000570514 SMC4Q9NTJ3 1288 aa12.52□□□□□ -0.41
TRAP1-204ENST00000570514 TMOD3Q9NYL9 352 aa12.52□□□□□ -0.41
TRAP1-204ENST00000570514 HEG1Q9ULI3 1381 aa12.52□□□□□ -0.41
TRAP1-204ENST00000570514 CANXP27824 592 aaKnown RBP12.51□□□□□ -0.41
TRAP1-204ENST00000570514 EIF4A1P60842 406 aaKnown RBP12.51□□□□□ -0.41
TRAP1-204ENST00000570514 NFATC2IPQ8NCF5 419 aa12.51□□□□□ -0.41
TRAP1-204ENST00000570514 FMNL2Q96PY5 1086 aa12.51□□□□□ -0.41
TRAP1-204ENST00000570514 TEX13AQ9BXU3 409 aaPredicted RBP12.51□□□□□ -0.41
TRAP1-204ENST00000570514 PTPRCP08575 1304 aa12.51□□□□□ -0.41
TRAP1-204ENST00000570514 VIRMAQ69YN4 1812 aaKnown RBP12.51□□□□□ -0.41
TRAP1-204ENST00000570514 FAM98CQ17RN3 349 aaKnown RBP12.5□□□□□ -0.41
TRAP1-204ENST00000570514 ZKSCAN2Q63HK3 967 aa12.5□□□□□ -0.41
TRAP1-204ENST00000570514 VSIG10Q8N0Z9 540 aa12.5□□□□□ -0.41
TRAP1-204ENST00000570514 QTRT2Q9H974 415 aaKnown RBP12.5□□□□□ -0.41
TRAP1-204ENST00000570514 ERBB4Q15303 1308 aa12.5□□□□□ -0.41
TRAP1-204ENST00000570514 CACNA1FO60840 1977 aa12.49□□□□□ -0.41
TRAP1-204ENST00000570514 SNRPA1P09661 255 aaKnown RBP12.49□□□□□ -0.41
TRAP1-204ENST00000570514 RBM6P78332 1123 aaKnown RBP12.49□□□□□ -0.41
TRAP1-204ENST00000570514 C8orf58Q8NAV2 365 aa12.49□□□□□ -0.41
TRAP1-204ENST00000570514 API5Q9BZZ5 524 aaKnown RBP12.49□□□□□ -0.41
TRAP1-204ENST00000570514 GLI3P10071 1580 aa12.48□□□□□ -0.41
TRAP1-204ENST00000570514 SSH1Q8WYL5 1049 aa12.48□□□□□ -0.41
TRAP1-204ENST00000570514 GIGYF1O75420 1035 aaPredicted RBP12.47□□□□□ -0.41
TRAP1-204ENST00000570514 HDGFL1Q5TGJ6 251 aa12.47□□□□□ -0.41
TRAP1-204ENST00000570514 ATF7IPQ6VMQ6 1270 aa12.47□□□□□ -0.41
TRAP1-204ENST00000570514 SMARCC1Q92922 1105 aaPredicted RBP12.47□□□□□ -0.41
TRAP1-204ENST00000570514 DBF4Q9UBU7 674 aaPredicted RBP12.47□□□□□ -0.41
TRAP1-204ENST00000570514 PAPPAQ13219 1627 aa12.47□□□□□ -0.41
TRAP1-204ENST00000570514 A0A0G2JS52 829 aa12.46□□□□□ -0.41
TRAP1-204ENST00000570514 MYT1Q01538 1121 aa12.46□□□□□ -0.41
TRAP1-204ENST00000570514 FTSJ3Q8IY81 847 aaKnown RBP12.46□□□□□ -0.41
TRAP1-204ENST00000570514 TSPYL6Q8N831 410 aa12.46□□□□□ -0.41
TRAP1-204ENST00000570514 MIS18AQ9NYP9 233 aa12.46□□□□□ -0.41
TRAP1-204ENST00000570514 BCAR3O75815 825 aa12.45□□□□□ -0.42
TRAP1-204ENST00000570514 MRPL50Q8N5N7 158 aaKnown RBP12.45□□□□□ -0.42
TRAP1-204ENST00000570514 MARCH10Q8NA82 808 aaPredicted RBP12.45□□□□□ -0.42
TRAP1-204ENST00000570514 HYPKQ9NX55 129 aa12.45□□□□□ -0.42
TRAP1-204ENST00000570514 GTF3C3Q9Y5Q9 886 aa12.45□□□□□ -0.42
TRAP1-204ENST00000570514 UBR2Q8IWV8 1755 aa12.45□□□□□ -0.42
TRAP1-204ENST00000570514 FKBP8Q14318 412 aa12.44□□□□□ -0.42
TRAP1-204ENST00000570514 DZIP1LQ8IYY4 767 aaKnown RBP12.44□□□□□ -0.42
TRAP1-204ENST00000570514 TOGARAM1Q9Y4F4 1720 aa12.43□□□□□ -0.42
TRAP1-204ENST00000570514 ZNF831Q5JPB2 1677 aa12.43□□□□□ -0.42
TRAP1-204ENST00000570514 ELL2O00472 640 aaPredicted RBP12.43□□□□□ -0.42
TRAP1-204ENST00000570514 STARD3NLO95772 234 aa12.43□□□□□ -0.42
TRAP1-204ENST00000570514 SLC4A2P04920 1241 aa12.43□□□□□ -0.42
TRAP1-204ENST00000570514 FAM196AQ6ZSG2 479 aa12.43□□□□□ -0.42
TRAP1-204ENST00000570514 SEPT12Q8IYM1 358 aa12.43□□□□□ -0.42
TRAP1-204ENST00000570514 PIGBQ92521 554 aa12.43□□□□□ -0.42
TRAP1-204ENST00000570514 FRAT1Q92837 279 aaPredicted RBP12.43□□□□□ -0.42
TRAP1-204ENST00000570514 ZNF496Q96IT1 587 aaPredicted RBP12.43□□□□□ -0.42
TRAP1-204ENST00000570514 DDX21Q9NR30 783 aaKnown RBP eCLIP12.43□□□□□ -0.42
TRAP1-204ENST00000570514 DDX19BQ9UMR2 479 aa12.43□□□□□ -0.42
TRAP1-204ENST00000570514 IBTKQ9P2D0 1353 aaPredicted RBP12.43□□□□□ -0.42
TRAP1-204ENST00000570514 DOT1LQ8TEK3 1739 aa12.42□□□□□ -0.42
TRAP1-204ENST00000570514 PXDNLA1KZ92 1463 aa12.42□□□□□ -0.42
TRAP1-204ENST00000570514 CICQ96RK0 1608 aaPredicted RBP12.42□□□□□ -0.42
TRAP1-204ENST00000570514 DDX58O95786 925 aaKnown RBP12.42□□□□□ -0.42
TRAP1-204ENST00000570514 RXRBP28702 533 aa12.42□□□□□ -0.42
TRAP1-204ENST00000570514 PRIM1P49642 420 aaKnown RBP12.42□□□□□ -0.42
TRAP1-204ENST00000570514 NOB1Q9ULX3 412 aaKnown RBP12.42□□□□□ -0.42
TRAP1-204ENST00000570514 LAMB4A4D0S4 1761 aa12.42□□□□□ -0.42
TRAP1-204ENST00000570514 KCPQ6ZWJ8 1503 aa12.42□□□□□ -0.42
TRAP1-204ENST00000570514 ITGB4P16144 1822 aa12.41□□□□□ -0.42
TRAP1-204ENST00000570514 TRIM27P14373 513 aa12.41□□□□□ -0.42
TRAP1-204ENST00000570514 ATG3Q9NT62 314 aa12.41□□□□□ -0.42
TRAP1-204ENST00000570514 PPP4R2Q9NY27 417 aa12.41□□□□□ -0.42
TRAP1-204ENST00000570514 HDAC5Q9UQL6 1122 aa12.41□□□□□ -0.42
TRAP1-204ENST00000570514 ABCC4O15439 1325 aa12.4□□□□□ -0.42
TRAP1-204ENST00000570514 CCT4P50991 539 aaKnown RBP12.4□□□□□ -0.42
TRAP1-204ENST00000570514 FLIIQ13045 1269 aa12.4□□□□□ -0.42
TRAP1-204ENST00000570514 SLC39A6Q13433 755 aa12.4□□□□□ -0.42
TRAP1-204ENST00000570514 MVPQ14764 893 aaKnown RBP12.4□□□□□ -0.42
TRAP1-204ENST00000570514 KRT24Q2M2I5 525 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms