RNA–Protein interactions for RNA: ENST00000569896.1

RAB11A-209, Transcript of RAB11A, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB11A, Length 1,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11A-209ENST00000569896 COL5A2P05997 1499 aaPredicted RBP10.94□□□□□ -0.66
RAB11A-209ENST00000569896 PEAK1Q9H792 1746 aa10.94□□□□□ -0.66
RAB11A-209ENST00000569896 GLI3P10071 1580 aa10.94□□□□□ -0.66
RAB11A-209ENST00000569896 C2orf72A6NCS6 295 aa10.93□□□□□ -0.66
RAB11A-209ENST00000569896 HOXB1P14653 301 aaPredicted RBP10.93□□□□□ -0.66
RAB11A-209ENST00000569896 NKX1-1Q15270 411 aaPredicted RBP10.93□□□□□ -0.66
RAB11A-209ENST00000569896 ANKRD24Q8TF21 1146 aa10.93□□□□□ -0.66
RAB11A-209ENST00000569896 ZSWIM6Q9HCJ5 1215 aa10.93□□□□□ -0.66
RAB11A-209ENST00000569896 NLRP2Q9NX02 1062 aa10.93□□□□□ -0.66
RAB11A-209ENST00000569896 SPATA31A5Q5VU36 1347 aa10.93□□□□□ -0.66
RAB11A-209ENST00000569896 SPATA31A7Q8IWB4 1347 aa10.93□□□□□ -0.66
RAB11A-209ENST00000569896 BLMP54132 1417 aaPredicted RBP10.93□□□□□ -0.66
RAB11A-209ENST00000569896 FAM205CA6NFA0 338 aa10.92□□□□□ -0.66
RAB11A-209ENST00000569896 WNK3Q9BYP7 1800 aa10.92□□□□□ -0.66
RAB11A-209ENST00000569896 SPATA31A1Q5TZJ5 1347 aa10.92□□□□□ -0.66
RAB11A-209ENST00000569896 WDR17Q8IZU2 1322 aa10.92□□□□□ -0.66
RAB11A-209ENST00000569896 RTL1A6NKG5 1358 aa10.92□□□□□ -0.66
RAB11A-209ENST00000569896 FLT4P35916 1363 aa10.92□□□□□ -0.66
RAB11A-209ENST00000569896 CRB1P82279 1406 aa10.92□□□□□ -0.66
RAB11A-209ENST00000569896 SMG6Q86US8 1419 aaKnown RBP10.92□□□□□ -0.66
RAB11A-209ENST00000569896 FAM98CQ17RN3 349 aaKnown RBP10.91□□□□□ -0.66
RAB11A-209ENST00000569896 HSP90AB2PQ58FF8 381 aa10.91□□□□□ -0.66
RAB11A-209ENST00000569896 POLKQ9UBT6 870 aa10.91□□□□□ -0.66
RAB11A-209ENST00000569896 NPC1L1Q9UHC9 1359 aa10.91□□□□□ -0.66
RAB11A-209ENST00000569896 KIF3CO14782 793 aa10.9□□□□□ -0.66
RAB11A-209ENST00000569896 TCP11L2Q8N4U5 519 aa10.9□□□□□ -0.66
RAB11A-209ENST00000569896 ERBB3P21860 1342 aa10.9□□□□□ -0.66
RAB11A-209ENST00000569896 KIF24Q5T7B8 1368 aa10.9□□□□□ -0.66
RAB11A-209ENST00000569896 INSRP06213 1382 aa10.89□□□□□ -0.67
RAB11A-209ENST00000569896 CDK12Q9NYV4 1490 aaPredicted RBP10.89□□□□□ -0.67
RAB11A-209ENST00000569896 MTHFSP49914 203 aa10.89□□□□□ -0.67
RAB11A-209ENST00000569896 SEPT12Q8IYM1 358 aa10.89□□□□□ -0.67
RAB11A-209ENST00000569896 HS3ST6Q96QI5 342 aa10.89□□□□□ -0.67
RAB11A-209ENST00000569896 CARD10Q9BWT7 1032 aa10.89□□□□□ -0.67
RAB11A-209ENST00000569896 THRAP3Q9Y2W1 955 aaKnown RBP10.89□□□□□ -0.67
RAB11A-209ENST00000569896 RGS12O14924 1447 aa10.89□□□□□ -0.67
RAB11A-209ENST00000569896 PARP4Q9UKK3 1724 aaKnown RBP10.88□□□□□ -0.67
RAB11A-209ENST00000569896 THSD7AQ9UPZ6 1657 aa10.87□□□□□ -0.67
RAB11A-209ENST00000569896 BARGINQ6ZT62 677 aa10.87□□□□□ -0.67
RAB11A-209ENST00000569896 ONECUT3O60422 494 aaPredicted RBP10.86□□□□□ -0.67
RAB11A-209ENST00000569896 PDE3BQ13370 1112 aa10.86□□□□□ -0.67
RAB11A-209ENST00000569896 NBPF6Q5VWK0 638 aa10.86□□□□□ -0.67
RAB11A-209ENST00000569896 USHBP1Q8N6Y0 703 aa10.86□□□□□ -0.67
RAB11A-209ENST00000569896 NBPF4Q96M43 638 aa10.86□□□□□ -0.67
RAB11A-209ENST00000569896 CDCA7Q9BWT1 371 aaPredicted RBP10.86□□□□□ -0.67
RAB11A-209ENST00000569896 IL2RBP14784 551 aa10.85□□□□□ -0.67
RAB11A-209ENST00000569896 PPP2R1AP30153 589 aa10.85□□□□□ -0.67
RAB11A-209ENST00000569896 EIF4A2Q14240 407 aaKnown RBP10.85□□□□□ -0.67
RAB11A-209ENST00000569896 DDB1Q16531 1140 aa10.85□□□□□ -0.67
RAB11A-209ENST00000569896 KRT27Q7Z3Y8 459 aa10.85□□□□□ -0.67
RAB11A-209ENST00000569896 CFAP53Q96M91 514 aa10.85□□□□□ -0.67
RAB11A-209ENST00000569896 LRRC37A3O60309 1634 aa10.84□□□□□ -0.67
RAB11A-209ENST00000569896 EXOC5O00471 708 aa10.84□□□□□ -0.67
RAB11A-209ENST00000569896 RALBP1Q15311 655 aa10.84□□□□□ -0.67
RAB11A-209ENST00000569896 ARSIQ5FYB1 569 aa10.84□□□□□ -0.67
RAB11A-209ENST00000569896 GPR153Q6NV75 609 aa10.84□□□□□ -0.67
RAB11A-209ENST00000569896 RAPGEF4Q8WZA2 1011 aa10.84□□□□□ -0.67
RAB11A-209ENST00000569896 RTN4Q9NQC3 1192 aaKnown RBP10.84□□□□□ -0.67
RAB11A-209ENST00000569896 DIAPH1O60610 1272 aaKnown RBP10.83□□□□□ -0.68
RAB11A-209ENST00000569896 EYA1Q99502 592 aa10.83□□□□□ -0.68
RAB11A-209ENST00000569896 PARD3Q8TEW0 1356 aa10.83□□□□□ -0.68
RAB11A-209ENST00000569896 TATP17735 454 aaPredicted RBP10.82□□□□□ -0.68
RAB11A-209ENST00000569896 FAM182BQ5T319 152 aa10.82□□□□□ -0.68
RAB11A-209ENST00000569896 SBF2Q86WG5 1849 aa10.82□□□□□ -0.68
RAB11A-209ENST00000569896 POTEB3A0JP26 581 aa10.81□□□□□ -0.68
RAB11A-209ENST00000569896 U2SURPO15042 1029 aaKnown RBP10.81□□□□□ -0.68
RAB11A-209ENST00000569896 GTPBP6O43824 516 aaPredicted RBP10.81□□□□□ -0.68
RAB11A-209ENST00000569896 POTEBQ6S5H4 581 aa10.81□□□□□ -0.68
RAB11A-209ENST00000569896 GPHNQ9NQX3 736 aaPredicted RBP10.81□□□□□ -0.68
RAB11A-209ENST00000569896 IL13P35225 146 aa10.8□□□□□ -0.68
RAB11A-209ENST00000569896 NUDCQ9Y266 331 aa10.8□□□□□ -0.68
RAB11A-209ENST00000569896 DISP2A7MBM2 1401 aa10.8□□□□□ -0.68
RAB11A-209ENST00000569896 RGPD1P0DJD0 1748 aa10.8□□□□□ -0.68
RAB11A-209ENST00000569896 VIRMAQ69YN4 1812 aaKnown RBP10.8□□□□□ -0.68
RAB11A-209ENST00000569896 EP400Q96L91 3159 aa10.8□□□□□ -0.68
RAB11A-209ENST00000569896 ANP32CO43423 234 aa10.79□□□□□ -0.68
RAB11A-209ENST00000569896 VARS2Q5ST30 1063 aaKnown RBP10.79□□□□□ -0.68
RAB11A-209ENST00000569896 ZCRB1Q8TBF4 217 aaKnown RBP10.79□□□□□ -0.68
RAB11A-209ENST00000569896 DDX54Q8TDD1 881 aaKnown RBP10.79□□□□□ -0.68
RAB11A-209ENST00000569896 UPF1Q92900 1129 aaKnown RBP eCLIP10.79□□□□□ -0.685e-12■□□□□ 8.5
RAB11A-209ENST00000569896 PRKRIP1Q9H875 184 aaPredicted RBP10.79□□□□□ -0.68
RAB11A-209ENST00000569896 SHANK3Q9BYB0 1731 aa10.79□□□□□ -0.68
RAB11A-209ENST00000569896 IGSF1Q8N6C5 1336 aa10.79□□□□□ -0.68
RAB11A-209ENST00000569896 MYBBP1AQ9BQG0 1328 aaKnown RBP10.79□□□□□ -0.68
RAB11A-209ENST00000569896 SLC34A2O95436 690 aa10.78□□□□□ -0.68
RAB11A-209ENST00000569896 HMOX1P09601 288 aa10.78□□□□□ -0.68
RAB11A-209ENST00000569896 FOXK1P85037 733 aa10.78□□□□□ -0.68
RAB11A-209ENST00000569896 SULT6B1Q6IMI4 303 aa10.78□□□□□ -0.68
RAB11A-209ENST00000569896 FAM196AQ6ZSG2 479 aa10.78□□□□□ -0.68
RAB11A-209ENST00000569896 MEGF6O75095 1541 aa10.78□□□□□ -0.68
RAB11A-209ENST00000569896 PKD1L3Q7Z443 1732 aa10.78□□□□□ -0.68
RAB11A-209ENST00000569896 TNS2Q63HR2 1409 aa10.78□□□□□ -0.68
RAB11A-209ENST00000569896 SF3B2Q13435 895 aaKnown RBP10.77□□□□□ -0.68
RAB11A-209ENST00000569896 PLPP6Q8IY26 295 aa10.77□□□□□ -0.68
RAB11A-209ENST00000569896 MARCH10Q8NA82 808 aaPredicted RBP10.77□□□□□ -0.68
RAB11A-209ENST00000569896 SPG7Q9UQ90 795 aa10.77□□□□□ -0.68
RAB11A-209ENST00000569896 COL3A1P02461 1466 aaPredicted RBP10.77□□□□□ -0.68
RAB11A-209ENST00000569896 OVOS2A0A0G2JMS6 1433 aa10.77□□□□□ -0.69
RAB11A-209ENST00000569896 AEBP1Q8IUX7 1158 aa10.77□□□□□ -0.69
RAB11A-209ENST00000569896 KHSRPQ92945 711 aaKnown RBP eCLIP10.77□□□□□ -0.694e-8■■□□□ 14.2
Retrieved 100 of 20,778 RNA–protein pairs in 89.7 ms