RNA–Protein interactions for RNA: ENST00000569842.5

NUP93-220, Transcript of nucleoporin 93, humanhuman

TSL 5 BASIC

Gene NUP93, Length 2,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-220ENST00000569842 SLFN5Q08AF3 891 aa16.07■□□□□ 0.16
NUP93-220ENST00000569842 ZNF853P0CG23 659 aa16.06■□□□□ 0.16
NUP93-220ENST00000569842 TMOD3Q9NYL9 352 aa16.06■□□□□ 0.16
NUP93-220ENST00000569842 TOGARAM1Q9Y4F4 1720 aa16.06■□□□□ 0.16
NUP93-220ENST00000569842 CHL1O00533 1208 aa16.06■□□□□ 0.16
NUP93-220ENST00000569842 MRC1P22897 1456 aa16.05■□□□□ 0.16
NUP93-220ENST00000569842 BTBD11A6QL63 1104 aa16.05■□□□□ 0.16
NUP93-220ENST00000569842 TSR2Q969E8 191 aaKnown RBP16.05■□□□□ 0.16
NUP93-220ENST00000569842 VIRMAQ69YN4 1812 aaKnown RBP16.05■□□□□ 0.16
NUP93-220ENST00000569842 MYH16Q9H6N6 1097 aa16.05■□□□□ 0.16
NUP93-220ENST00000569842 MBIPQ9NS73 344 aa16.05■□□□□ 0.16
NUP93-220ENST00000569842 TSPYL4Q9UJ04 414 aa16.05■□□□□ 0.16
NUP93-220ENST00000569842 KCNQ2O43526 872 aa16.04■□□□□ 0.16
NUP93-220ENST00000569842 FAM196AQ6ZSG2 479 aa16.04■□□□□ 0.16
NUP93-220ENST00000569842 PIGBQ92521 554 aa16.04■□□□□ 0.16
NUP93-220ENST00000569842 BCL9O00512 1426 aa16.04■□□□□ 0.16
NUP93-220ENST00000569842 DOT1LQ8TEK3 1739 aa16.04■□□□□ 0.16
NUP93-220ENST00000569842 KAT6BQ8WYB5 2073 aa16.03■□□□□ 0.16
NUP93-220ENST00000569842 FANCIQ9NVI1 1328 aa16.03■□□□□ 0.16
NUP93-220ENST00000569842 TRMT2AQ8IZ69 625 aaKnown RBP16.03■□□□□ 0.16
NUP93-220ENST00000569842 SLC39A6Q13433 755 aa16.03■□□□□ 0.16
NUP93-220ENST00000569842 DUSP27Q5VZP5 1158 aa16.03■□□□□ 0.16
NUP93-220ENST00000569842 BABAM1Q9NWV8 329 aa16.03■□□□□ 0.16
NUP93-220ENST00000569842 KCNQ3O43525 872 aa16.02■□□□□ 0.15
NUP93-220ENST00000569842 PTF1AQ7RTS3 328 aa16.02■□□□□ 0.15
NUP93-220ENST00000569842 SIPA1L3O60292 1781 aaPredicted RBP16.01■□□□□ 0.15
NUP93-220ENST00000569842 ZNF790Q6PG37 636 aa16.01■□□□□ 0.15
NUP93-220ENST00000569842 ITGB4P16144 1822 aa16■□□□□ 0.15
NUP93-220ENST00000569842 ASAP1Q9ULH1 1129 aa16■□□□□ 0.15
NUP93-220ENST00000569842 TTC5Q8N0Z6 440 aa16■□□□□ 0.15
NUP93-220ENST00000569842 EP400Q96L91 3159 aa15.99■□□□□ 0.15
NUP93-220ENST00000569842 ATG3Q9NT62 314 aa15.99■□□□□ 0.15
NUP93-220ENST00000569842 TRIM37O94972 964 aa15.99■□□□□ 0.15
NUP93-220ENST00000569842 EXOSC9Q06265 439 aaKnown RBP15.99■□□□□ 0.15
NUP93-220ENST00000569842 KRT24Q2M2I5 525 aa15.98■□□□□ 0.15
NUP93-220ENST00000569842 BCL11BQ9C0K0 894 aaPredicted RBP15.98■□□□□ 0.15
NUP93-220ENST00000569842 EIF4A1P60842 406 aaKnown RBP15.98■□□□□ 0.15
NUP93-220ENST00000569842 NHSQ6T4R5 1651 aa15.97■□□□□ 0.15
NUP93-220ENST00000569842 PTCD1O75127 700 aaKnown RBP15.97■□□□□ 0.15
NUP93-220ENST00000569842 C8orf58Q8NAV2 365 aa15.97■□□□□ 0.15
NUP93-220ENST00000569842 ZNF496Q96IT1 587 aaPredicted RBP15.97■□□□□ 0.15
NUP93-220ENST00000569842 ELL2O00472 640 aaPredicted RBP15.96■□□□□ 0.15
NUP93-220ENST00000569842 KDM3BQ7LBC6 1761 aa15.96■□□□□ 0.15
NUP93-220ENST00000569842 SBF2Q86WG5 1849 aa15.96■□□□□ 0.15
NUP93-220ENST00000569842 TSPYL6Q8N831 410 aa15.95■□□□□ 0.14
NUP93-220ENST00000569842 FMNL2Q96PY5 1086 aa15.95■□□□□ 0.14
NUP93-220ENST00000569842 RBM42Q9BTD8 480 aaKnown RBP15.95■□□□□ 0.14
NUP93-220ENST00000569842 SMARCC1Q92922 1105 aaPredicted RBP15.94■□□□□ 0.14
NUP93-220ENST00000569842 PAPPAQ13219 1627 aa15.94■□□□□ 0.14
NUP93-220ENST00000569842 PALLDQ8WX93 1383 aa15.94■□□□□ 0.14
NUP93-220ENST00000569842 TWISTNBQ3B726 338 aaPredicted RBP15.94■□□□□ 0.14
NUP93-220ENST00000569842 KCPQ6ZWJ8 1503 aa15.93■□□□□ 0.14
NUP93-220ENST00000569842 BTAF1O14981 1849 aa15.93■□□□□ 0.14
NUP93-220ENST00000569842 HEG1Q9ULI3 1381 aa15.92■□□□□ 0.14
NUP93-220ENST00000569842 GIGYF1O75420 1035 aaPredicted RBP15.92■□□□□ 0.14
NUP93-220ENST00000569842 PRAMEF22A3QJZ6 481 aa15.92■□□□□ 0.14
NUP93-220ENST00000569842 VAMP4O75379 141 aa15.91■□□□□ 0.14
NUP93-220ENST00000569842 CENPBP07199 599 aaPredicted RBP15.91■□□□□ 0.14
NUP93-220ENST00000569842 SNRPA1P09661 255 aaKnown RBP15.91■□□□□ 0.14
NUP93-220ENST00000569842 SLC4A9Q96Q91 983 aa15.91■□□□□ 0.14
NUP93-220ENST00000569842 UBR2Q8IWV8 1755 aa15.9■□□□□ 0.14
NUP93-220ENST00000569842 LOC102724428A0A0B4J2F2 783 aa15.9■□□□□ 0.14
NUP93-220ENST00000569842 SIK1P57059 783 aa15.9■□□□□ 0.14
NUP93-220ENST00000569842 APBA3O96018 575 aa15.9■□□□□ 0.14
NUP93-220ENST00000569842 CT47B1P0C2W7 299 aaPredicted RBP15.9■□□□□ 0.14
NUP93-220ENST00000569842 HOXB7P09629 217 aa15.89■□□□□ 0.13
NUP93-220ENST00000569842 VSIG10Q8N0Z9 540 aa15.89■□□□□ 0.13
NUP93-220ENST00000569842 NECTIN2Q92692 538 aa15.89■□□□□ 0.13
NUP93-220ENST00000569842 EIF2S2P20042 333 aaKnown RBP15.89■□□□□ 0.13
NUP93-220ENST00000569842 USP16Q9Y5T5 823 aa15.89■□□□□ 0.13
NUP93-220ENST00000569842 ATP6V1AP38606 617 aa15.88■□□□□ 0.13
NUP93-220ENST00000569842 SOS1Q07889 1333 aaPredicted RBP15.88■□□□□ 0.13
NUP93-220ENST00000569842 HDGFL1Q5TGJ6 251 aa15.88■□□□□ 0.13
NUP93-220ENST00000569842 DNAJC10Q8IXB1 793 aa15.88■□□□□ 0.13
NUP93-220ENST00000569842 TCERG1O14776 1098 aaKnown RBP15.87■□□□□ 0.13
NUP93-220ENST00000569842 KCNQ4P56696 695 aa15.87■□□□□ 0.13
NUP93-220ENST00000569842 RCAN3Q9UKA8 241 aa15.87■□□□□ 0.13
NUP93-220ENST00000569842 TEX13AQ9BXU3 409 aaPredicted RBP15.86■□□□□ 0.13
NUP93-220ENST00000569842 CCNL1Q9UK58 526 aaPredicted RBP15.86■□□□□ 0.13
NUP93-220ENST00000569842 ITPK1Q13572 414 aa15.86■□□□□ 0.13
NUP93-220ENST00000569842 PLSCR1O15162 318 aa15.86■□□□□ 0.13
NUP93-220ENST00000569842 RARSP54136 660 aaKnown RBP15.86■□□□□ 0.13
NUP93-220ENST00000569842 SF3B2Q13435 895 aaKnown RBP15.86■□□□□ 0.13
NUP93-220ENST00000569842 ZNF428Q96B54 188 aa15.86■□□□□ 0.13
NUP93-220ENST00000569842 BCL2L13Q9BXK5 485 aa15.86■□□□□ 0.13
NUP93-220ENST00000569842 C5P01031 1676 aa15.85■□□□□ 0.13
NUP93-220ENST00000569842 CCDC30Q5VVM6 783 aa15.85■□□□□ 0.13
NUP93-220ENST00000569842 SSH1Q8WYL5 1049 aa15.85■□□□□ 0.13
NUP93-220ENST00000569842 TNS1Q9HBL0 1735 aaKnown RBP15.85■□□□□ 0.13
NUP93-220ENST00000569842 STARD3NLO95772 234 aa15.84■□□□□ 0.13
NUP93-220ENST00000569842 CYP19A1P11511 503 aaPredicted RBP15.84■□□□□ 0.13
NUP93-220ENST00000569842 ILDR2Q71H61 639 aa15.84■□□□□ 0.13
NUP93-220ENST00000569842 CHMP4AQ9BY43 222 aa15.84■□□□□ 0.13
NUP93-220ENST00000569842 BCAR3O75815 825 aa15.83■□□□□ 0.13
NUP93-220ENST00000569842 TXNRD1Q16881 649 aa15.83■□□□□ 0.13
NUP93-220ENST00000569842 ALDH1L2Q3SY69 923 aa15.83■□□□□ 0.13
NUP93-220ENST00000569842 PROM2Q8N271 834 aa15.83■□□□□ 0.13
NUP93-220ENST00000569842 LRRC4BQ9NT99 713 aa15.83■□□□□ 0.13
NUP93-220ENST00000569842 SMC4Q9NTJ3 1288 aa15.83■□□□□ 0.13
NUP93-220ENST00000569842 A1BGP04217 495 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms