RNA–Protein interactions for RNA: ENST00000569711.1

LINC01654-201, Transcript of long intergenic non-protein coding RNA 1654, humanhuman

TSL 1 (best) BASIC

Gene LINC01654, Length 2,471 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01654-201ENST00000569711 GNAT3A8MTJ3 354 aa13.11□□□□□ -0.31
LINC01654-201ENST00000569711 AMPHP49418 695 aa13.11□□□□□ -0.31
LINC01654-201ENST00000569711 SALL3Q9BXA9 1300 aa13.11□□□□□ -0.31
LINC01654-201ENST00000569711 LTKP29376 864 aa13.11□□□□□ -0.31
LINC01654-201ENST00000569711 STAP2Q9UGK3 403 aa13.11□□□□□ -0.31
LINC01654-201ENST00000569711 ESPNB1AK53 854 aa13.1□□□□□ -0.31
LINC01654-201ENST00000569711 ATP8B2P98198 1209 aa13.1□□□□□ -0.31
LINC01654-201ENST00000569711 OTUD7AQ8TE49 926 aaPredicted RBP13.1□□□□□ -0.31
LINC01654-201ENST00000569711 PPP1R9BQ96SB3 815 aa13.1□□□□□ -0.31
LINC01654-201ENST00000569711 FOXD4L1Q9NU39 408 aa13.1□□□□□ -0.31
LINC01654-201ENST00000569711 XRN1Q8IZH2 1706 aaKnown RBP13.1□□□□□ -0.31
LINC01654-201ENST00000569711 PIK3C2AO00443 1686 aa13.1□□□□□ -0.31
LINC01654-201ENST00000569711 FLIIQ13045 1269 aa13.1□□□□□ -0.31
LINC01654-201ENST00000569711 NGDNQ8NEJ9 315 aaKnown RBP13.1□□□□□ -0.31
LINC01654-201ENST00000569711 ARXQ96QS3 562 aa13.1□□□□□ -0.31
LINC01654-201ENST00000569711 EYA1Q99502 592 aa13.1□□□□□ -0.31
LINC01654-201ENST00000569711 AMOTL2Q9Y2J4 779 aa13.1□□□□□ -0.31
LINC01654-201ENST00000569711 SMARCA5O60264 1052 aaPredicted RBP13.09□□□□□ -0.31
LINC01654-201ENST00000569711 SLC4A10Q6U841 1118 aa13.09□□□□□ -0.31
LINC01654-201ENST00000569711 CEP170BQ9Y4F5 1589 aaPredicted RBP13.09□□□□□ -0.31
LINC01654-201ENST00000569711 MX1P20591 662 aa13.08□□□□□ -0.31
LINC01654-201ENST00000569711 NASPP49321 788 aaPredicted RBP13.08□□□□□ -0.31
LINC01654-201ENST00000569711 GAS2L3Q86XJ1 694 aa13.08□□□□□ -0.31
LINC01654-201ENST00000569711 INTS4Q96HW7 963 aaKnown RBP13.08□□□□□ -0.31
LINC01654-201ENST00000569711 MAP3K5Q99683 1374 aa13.08□□□□□ -0.31
LINC01654-201ENST00000569711 TUBGCP6Q96RT7 1819 aa13.08□□□□□ -0.32
LINC01654-201ENST00000569711 HS1BP3Q53T59 392 aa13.08□□□□□ -0.32
LINC01654-201ENST00000569711 ESYT1Q9BSJ8 1104 aa13.08□□□□□ -0.32
LINC01654-201ENST00000569711 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.08□□□□□ -0.32
LINC01654-201ENST00000569711 RAB11FIP3O75154 756 aa13.07□□□□□ -0.32
LINC01654-201ENST00000569711 G2E3Q7L622 706 aa13.07□□□□□ -0.32
LINC01654-201ENST00000569711 LMBRD1Q9NUN5 540 aa13.07□□□□□ -0.32
LINC01654-201ENST00000569711 HOXB7P09629 217 aa13.07□□□□□ -0.32
LINC01654-201ENST00000569711 FKBP5Q13451 457 aaPredicted RBP13.07□□□□□ -0.32
LINC01654-201ENST00000569711 TAF7Q15545 349 aaPredicted RBP13.07□□□□□ -0.32
LINC01654-201ENST00000569711 MCTP1Q6DN14 999 aa13.07□□□□□ -0.32
LINC01654-201ENST00000569711 MBD3O95983 291 aa13.06□□□□□ -0.32
LINC01654-201ENST00000569711 CUL4AQ13619 759 aa13.06□□□□□ -0.32
LINC01654-201ENST00000569711 FOXO3O43524 673 aa13.06□□□□□ -0.32
LINC01654-201ENST00000569711 THEMISQ8N1K5 641 aaPredicted RBP13.06□□□□□ -0.32
LINC01654-201ENST00000569711 F6X3S4 739 aa13.05□□□□□ -0.32
LINC01654-201ENST00000569711 APBB1O00213 710 aa13.05□□□□□ -0.32
LINC01654-201ENST00000569711 HOXC9P31274 260 aa13.05□□□□□ -0.32
LINC01654-201ENST00000569711 MIS18AQ9NYP9 233 aa13.05□□□□□ -0.32
LINC01654-201ENST00000569711 NWD1Q149M9 1564 aa13.05□□□□□ -0.32
LINC01654-201ENST00000569711 ZSCAN23Q3MJ62 389 aa13.04□□□□□ -0.32
LINC01654-201ENST00000569711 KLHL34Q8N239 644 aa13.04□□□□□ -0.32
LINC01654-201ENST00000569711 CHMLP26374 656 aa13.04□□□□□ -0.32
LINC01654-201ENST00000569711 NEK4P51957 841 aa13.04□□□□□ -0.32
LINC01654-201ENST00000569711 NLRP6P59044 892 aa13.04□□□□□ -0.32
LINC01654-201ENST00000569711 SSH3Q8TE77 659 aa13.04□□□□□ -0.32
LINC01654-201ENST00000569711 SLC26A8Q96RN1 970 aa13.04□□□□□ -0.32
LINC01654-201ENST00000569711 EXOC6BQ9Y2D4 811 aa13.04□□□□□ -0.32
LINC01654-201ENST00000569711 NUTM2FA1L443 756 aa13.03□□□□□ -0.32
LINC01654-201ENST00000569711 UBTFL1P0CB47 393 aaPredicted RBP13.03□□□□□ -0.32
LINC01654-201ENST00000569711 TMX3Q96JJ7 454 aa13.03□□□□□ -0.32
LINC01654-201ENST00000569711 ADGRL3Q9HAR2 1447 aa13.03□□□□□ -0.32
LINC01654-201ENST00000569711 HSP90AB4PQ58FF6 505 aa13.03□□□□□ -0.32
LINC01654-201ENST00000569711 HDAC5Q9UQL6 1122 aa13.02□□□□□ -0.32
LINC01654-201ENST00000569711 MARF1Q9Y4F3 1742 aaKnown RBP13.02□□□□□ -0.32
LINC01654-201ENST00000569711 SOX12O15370 315 aa13.02□□□□□ -0.33
LINC01654-201ENST00000569711 BRD1O95696 1058 aa13.02□□□□□ -0.33
LINC01654-201ENST00000569711 CAVIN1Q6NZI2 390 aaKnown RBP13.02□□□□□ -0.33
LINC01654-201ENST00000569711 ZSCAN30Q86W11 494 aa13.02□□□□□ -0.33
LINC01654-201ENST00000569711 CEMIPQ8WUJ3 1361 aa13.02□□□□□ -0.33
LINC01654-201ENST00000569711 MED1Q15648 1581 aaPredicted RBP13.02□□□□□ -0.33
LINC01654-201ENST00000569711 PNMA6EA0A0J9YXQ4 647 aa13.01□□□□□ -0.33
LINC01654-201ENST00000569711 ZGPATQ8N5A5 531 aaKnown RBP13.01□□□□□ -0.33
LINC01654-201ENST00000569711 SYAP1Q96A49 352 aaPredicted RBP13.01□□□□□ -0.33
LINC01654-201ENST00000569711 USP44Q9H0E7 712 aa13.01□□□□□ -0.33
LINC01654-201ENST00000569711 ZDHHC9Q9Y397 364 aa13.01□□□□□ -0.33
LINC01654-201ENST00000569711 TRIM6-TRIM34B2RNG4 842 aa13.01□□□□□ -0.33
LINC01654-201ENST00000569711 POLA2Q14181 598 aa13.01□□□□□ -0.33
LINC01654-201ENST00000569711 IL17REQ8NFR9 667 aa13.01□□□□□ -0.33
LINC01654-201ENST00000569711 NAP1L5Q96NT1 182 aaPredicted RBP13.01□□□□□ -0.33
LINC01654-201ENST00000569711 LRRFIP2Q9Y608 721 aaKnown RBP13.01□□□□□ -0.33
LINC01654-201ENST00000569711 RGPD8O14715 1765 aaPredicted RBP13.01□□□□□ -0.33
LINC01654-201ENST00000569711 PRPF40AO75400 957 aaKnown RBP13□□□□□ -0.33
LINC01654-201ENST00000569711 HDGFL1Q5TGJ6 251 aa13□□□□□ -0.33
LINC01654-201ENST00000569711 KIF1BPQ96EK5 621 aa13□□□□□ -0.33
LINC01654-201ENST00000569711 ANO2Q9NQ90 1003 aa13□□□□□ -0.33
LINC01654-201ENST00000569711 NCLP19338 710 aaKnown RBP13□□□□□ -0.33
LINC01654-201ENST00000569711 LRSAM1Q6UWE0 723 aa13□□□□□ -0.33
LINC01654-201ENST00000569711 PHRF1Q9P1Y6 1649 aaKnown RBP12.99□□□□□ -0.33
LINC01654-201ENST00000569711 PHF14O94880 888 aa12.99□□□□□ -0.33
LINC01654-201ENST00000569711 HSPA4P34932 840 aa12.99□□□□□ -0.33
LINC01654-201ENST00000569711 PKP1Q13835 747 aa12.99□□□□□ -0.33
LINC01654-201ENST00000569711 RILPL2Q969X0 211 aa12.99□□□□□ -0.33
LINC01654-201ENST00000569711 OVOS2A0A0G2JMS6 1433 aa12.99□□□□□ -0.33
LINC01654-201ENST00000569711 USP42Q9H9J4 1324 aaKnown RBP12.99□□□□□ -0.33
LINC01654-201ENST00000569711 PLEKHG5O94827 1062 aa12.99□□□□□ -0.33
LINC01654-201ENST00000569711 MCM5P33992 734 aa12.99□□□□□ -0.33
LINC01654-201ENST00000569711 PDLIM2Q96JY6 352 aa12.99□□□□□ -0.33
LINC01654-201ENST00000569711 WDR33Q9C0J8 1336 aaKnown RBP12.98□□□□□ -0.33
LINC01654-201ENST00000569711 TPM2P07951 284 aa12.98□□□□□ -0.33
LINC01654-201ENST00000569711 MSNP26038 577 aaKnown RBP12.98□□□□□ -0.33
LINC01654-201ENST00000569711 TERF1P54274 439 aa12.98□□□□□ -0.33
LINC01654-201ENST00000569711 ABTB2Q8N961 1025 aa12.98□□□□□ -0.33
LINC01654-201ENST00000569711 GPT2Q8TD30 523 aa12.98□□□□□ -0.33
LINC01654-201ENST00000569711 IP6K1Q92551 441 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms