RNA–Protein interactions for RNA: ENST00000569606.1

EDC3-217, Transcript of enhancer of mRNA decapping 3, humanhuman

TSL 2

Gene EDC3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC3-217ENST00000569606 FANCIQ9NVI1 1328 aa16.28■□□□□ 0.2
EDC3-217ENST00000569606 ERVV-2B6SEH9 535 aa16.28■□□□□ 0.2
EDC3-217ENST00000569606 CHL1O00533 1208 aa16.28■□□□□ 0.2
EDC3-217ENST00000569606 MYH16Q9H6N6 1097 aa16.28■□□□□ 0.2
EDC3-217ENST00000569606 SLC52A2Q9HAB3 445 aa16.28■□□□□ 0.2
EDC3-217ENST00000569606 TSR2Q969E8 191 aaKnown RBP16.27■□□□□ 0.2
EDC3-217ENST00000569606 MBIPQ9NS73 344 aa16.27■□□□□ 0.2
EDC3-217ENST00000569606 RGS12O14924 1447 aa16.27■□□□□ 0.19
EDC3-217ENST00000569606 PAPPAQ13219 1627 aa16.27■□□□□ 0.19
EDC3-217ENST00000569606 CABP4P57796 275 aa16.26■□□□□ 0.19
EDC3-217ENST00000569606 ILDR2Q71H61 639 aa16.26■□□□□ 0.19
EDC3-217ENST00000569606 NFATC2IPQ8NCF5 419 aa16.26■□□□□ 0.19
EDC3-217ENST00000569606 BABAM1Q9NWV8 329 aa16.26■□□□□ 0.19
EDC3-217ENST00000569606 MIS18AQ9NYP9 233 aa16.26■□□□□ 0.19
EDC3-217ENST00000569606 BCL9O00512 1426 aa16.26■□□□□ 0.19
EDC3-217ENST00000569606 SBF2Q86WG5 1849 aa16.26■□□□□ 0.19
EDC3-217ENST00000569606 TSPYL4Q9UJ04 414 aa16.25■□□□□ 0.19
EDC3-217ENST00000569606 BTBD11A6QL63 1104 aa16.24■□□□□ 0.19
EDC3-217ENST00000569606 CENPBP07199 599 aaPredicted RBP16.24■□□□□ 0.19
EDC3-217ENST00000569606 KRT27Q7Z3Y8 459 aa16.24■□□□□ 0.19
EDC3-217ENST00000569606 NHSQ6T4R5 1651 aa16.24■□□□□ 0.19
EDC3-217ENST00000569606 TMOD3Q9NYL9 352 aa16.23■□□□□ 0.19
EDC3-217ENST00000569606 KAT6BQ8WYB5 2073 aa16.23■□□□□ 0.19
EDC3-217ENST00000569606 UBR2Q8IWV8 1755 aa16.23■□□□□ 0.19
EDC3-217ENST00000569606 FAM182BQ5T319 152 aa16.22■□□□□ 0.19
EDC3-217ENST00000569606 ACSBG1Q96GR2 724 aa16.22■□□□□ 0.19
EDC3-217ENST00000569606 KCNQ3O43525 872 aa16.21■□□□□ 0.19
EDC3-217ENST00000569606 PRIM1P49642 420 aaKnown RBP16.21■□□□□ 0.19
EDC3-217ENST00000569606 EXOSC9Q06265 439 aaKnown RBP16.21■□□□□ 0.19
EDC3-217ENST00000569606 PIGBQ92521 554 aa16.21■□□□□ 0.19
EDC3-217ENST00000569606 SLC39A6Q13433 755 aa16.2■□□□□ 0.18
EDC3-217ENST00000569606 ZNF790Q6PG37 636 aa16.2■□□□□ 0.18
EDC3-217ENST00000569606 SYTL4Q96C24 671 aaPredicted RBP16.2■□□□□ 0.18
EDC3-217ENST00000569606 KCNQ2O43526 872 aa16.19■□□□□ 0.18
EDC3-217ENST00000569606 EIF4A1P60842 406 aaKnown RBP16.19■□□□□ 0.18
EDC3-217ENST00000569606 KRT24Q2M2I5 525 aa16.19■□□□□ 0.18
EDC3-217ENST00000569606 C8orf58Q8NAV2 365 aa16.19■□□□□ 0.18
EDC3-217ENST00000569606 BTAF1O14981 1849 aa16.19■□□□□ 0.18
EDC3-217ENST00000569606 KCPQ6ZWJ8 1503 aa16.19■□□□□ 0.18
EDC3-217ENST00000569606 FAM196AQ6ZSG2 479 aa16.18■□□□□ 0.18
EDC3-217ENST00000569606 TSPYL6Q8N831 410 aa16.18■□□□□ 0.18
EDC3-217ENST00000569606 HEG1Q9ULI3 1381 aa16.17■□□□□ 0.18
EDC3-217ENST00000569606 C5P01031 1676 aa16.17■□□□□ 0.18
EDC3-217ENST00000569606 CT47B1P0C2W7 299 aaPredicted RBP16.16■□□□□ 0.18
EDC3-217ENST00000569606 TWISTNBQ3B726 338 aaPredicted RBP16.16■□□□□ 0.18
EDC3-217ENST00000569606 TTC5Q8N0Z6 440 aa16.16■□□□□ 0.18
EDC3-217ENST00000569606 ATG3Q9NT62 314 aa16.16■□□□□ 0.18
EDC3-217ENST00000569606 ASAP1Q9ULH1 1129 aa16.16■□□□□ 0.18
EDC3-217ENST00000569606 ELL2O00472 640 aaPredicted RBP16.15■□□□□ 0.18
EDC3-217ENST00000569606 VAMP4O75379 141 aa16.15■□□□□ 0.18
EDC3-217ENST00000569606 PTF1AQ7RTS3 328 aa16.15■□□□□ 0.18
EDC3-217ENST00000569606 ZNF496Q96IT1 587 aaPredicted RBP16.15■□□□□ 0.18
EDC3-217ENST00000569606 LAMB4A4D0S4 1761 aa16.15■□□□□ 0.18
EDC3-217ENST00000569606 FMNL2Q96PY5 1086 aa16.14■□□□□ 0.17
EDC3-217ENST00000569606 SOS1Q07889 1333 aaPredicted RBP16.14■□□□□ 0.17
EDC3-217ENST00000569606 GIGYF1O75420 1035 aaPredicted RBP16.13■□□□□ 0.17
EDC3-217ENST00000569606 HOXB7P09629 217 aa16.13■□□□□ 0.17
EDC3-217ENST00000569606 RCAN3Q9UKA8 241 aa16.13■□□□□ 0.17
EDC3-217ENST00000569606 BCL11BQ9C0K0 894 aaPredicted RBP16.12■□□□□ 0.17
EDC3-217ENST00000569606 CICQ96RK0 1608 aaPredicted RBP16.12■□□□□ 0.17
EDC3-217ENST00000569606 LY75O60449 1722 aa16.11■□□□□ 0.17
EDC3-217ENST00000569606 TJP1Q07157 1748 aa16.11■□□□□ 0.17
EDC3-217ENST00000569606 PRAMEF22A3QJZ6 481 aa16.11■□□□□ 0.17
EDC3-217ENST00000569606 PTCD1O75127 700 aaKnown RBP16.11■□□□□ 0.17
EDC3-217ENST00000569606 RARSP54136 660 aaKnown RBP16.11■□□□□ 0.17
EDC3-217ENST00000569606 SMARCC1Q92922 1105 aaPredicted RBP16.11■□□□□ 0.17
EDC3-217ENST00000569606 ZNF428Q96B54 188 aa16.11■□□□□ 0.17
EDC3-217ENST00000569606 ZNF831Q5JPB2 1677 aa16.11■□□□□ 0.17
EDC3-217ENST00000569606 PALLDQ8WX93 1383 aa16.11■□□□□ 0.17
EDC3-217ENST00000569606 TNS1Q9HBL0 1735 aaKnown RBP16.11■□□□□ 0.17
EDC3-217ENST00000569606 TRIM37O94972 964 aa16.1■□□□□ 0.17
EDC3-217ENST00000569606 SNRPA1P09661 255 aaKnown RBP16.1■□□□□ 0.17
EDC3-217ENST00000569606 VSIG10Q8N0Z9 540 aa16.09■□□□□ 0.17
EDC3-217ENST00000569606 SLC4A9Q96Q91 983 aa16.09■□□□□ 0.17
EDC3-217ENST00000569606 RBM42Q9BTD8 480 aaKnown RBP16.09■□□□□ 0.17
EDC3-217ENST00000569606 ALDH1L2Q3SY69 923 aa16.08■□□□□ 0.16
EDC3-217ENST00000569606 SSH1Q8WYL5 1049 aa16.08■□□□□ 0.16
EDC3-217ENST00000569606 USP16Q9Y5T5 823 aa16.08■□□□□ 0.16
EDC3-217ENST00000569606 CACNA1FO60840 1977 aa16.07■□□□□ 0.16
EDC3-217ENST00000569606 LOC102724428A0A0B4J2F2 783 aa16.07■□□□□ 0.16
EDC3-217ENST00000569606 SIK1P57059 783 aa16.07■□□□□ 0.16
EDC3-217ENST00000569606 HDGFL1Q5TGJ6 251 aa16.07■□□□□ 0.16
EDC3-217ENST00000569606 BCL2L13Q9BXK5 485 aa16.07■□□□□ 0.16
EDC3-217ENST00000569606 COL5A3P25940 1745 aaPredicted RBP16.07■□□□□ 0.16
EDC3-217ENST00000569606 TCERG1O14776 1098 aaKnown RBP16.06■□□□□ 0.16
EDC3-217ENST00000569606 BCAR3O75815 825 aa16.06■□□□□ 0.16
EDC3-217ENST00000569606 EIF2S2P20042 333 aaKnown RBP16.06■□□□□ 0.16
EDC3-217ENST00000569606 CCDC30Q5VVM6 783 aa16.06■□□□□ 0.16
EDC3-217ENST00000569606 MRPL50Q8N5N7 158 aaKnown RBP16.06■□□□□ 0.16
EDC3-217ENST00000569606 NECTIN2Q92692 538 aa16.06■□□□□ 0.16
EDC3-217ENST00000569606 SMC4Q9NTJ3 1288 aa16.06■□□□□ 0.16
EDC3-217ENST00000569606 SOCS7O14512 581 aa16.05■□□□□ 0.16
EDC3-217ENST00000569606 DNAJC10Q8IXB1 793 aa16.05■□□□□ 0.16
EDC3-217ENST00000569606 CHMP4AQ9BY43 222 aa16.05■□□□□ 0.16
EDC3-217ENST00000569606 SUPT16HQ9Y5B9 1047 aaKnown RBP16.05■□□□□ 0.16
EDC3-217ENST00000569606 TAF1LQ8IZX4 1826 aa16.05■□□□□ 0.16
EDC3-217ENST00000569606 RNF123Q5XPI4 1314 aa16.04■□□□□ 0.16
EDC3-217ENST00000569606 BRPF1P55201 1214 aaPredicted RBP16.04■□□□□ 0.16
EDC3-217ENST00000569606 TEX13AQ9BXU3 409 aaPredicted RBP16.04■□□□□ 0.16
EDC3-217ENST00000569606 RGPD3A6NKT7 1758 aaPredicted RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms