RNA–Protein interactions for RNA: ENST00000569390.1

NEIL1-222, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 346 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-222ENST00000569390 CNGB1Q14028 1251 aaPredicted RBP25.23■■□□□ 1.63
NEIL1-222ENST00000569390 AKAP4Q5JQC9 854 aa25.23■■□□□ 1.63
NEIL1-222ENST00000569390 HMOX1P09601 288 aa25.22■■□□□ 1.63
NEIL1-222ENST00000569390 ATP6V1AP38606 617 aa25.22■■□□□ 1.63
NEIL1-222ENST00000569390 COL3A1P02461 1466 aaPredicted RBP25.21■■□□□ 1.63
NEIL1-222ENST00000569390 CFAP53Q96M91 514 aa25.21■■□□□ 1.63
NEIL1-222ENST00000569390 SSFA2P28290 1259 aa25.19■■□□□ 1.62
NEIL1-222ENST00000569390 LINC00116Q8NCU8 138 aa25.19■■□□□ 1.62
NEIL1-222ENST00000569390 ZNF831Q5JPB2 1677 aa25.19■■□□□ 1.62
NEIL1-222ENST00000569390 ITPK1Q13572 414 aa25.18■■□□□ 1.62
NEIL1-222ENST00000569390 U2SURPO15042 1029 aaKnown RBP25.17■■□□□ 1.62
NEIL1-222ENST00000569390 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.16■■□□□ 1.62
NEIL1-222ENST00000569390 NFATC2IPQ8NCF5 419 aa25.16■■□□□ 1.62
NEIL1-222ENST00000569390 RBM42Q9BTD8 480 aaKnown RBP25.16■■□□□ 1.62
NEIL1-222ENST00000569390 UBR3Q6ZT12 1888 aa25.15■■□□□ 1.62
NEIL1-222ENST00000569390 SCN11AQ9UI33 1791 aa25.15■■□□□ 1.62
NEIL1-222ENST00000569390 GNPATO15228 680 aa25.14■■□□□ 1.62
NEIL1-222ENST00000569390 MTHFSDQ2M296 383 aaKnown RBP25.14■■□□□ 1.62
NEIL1-222ENST00000569390 NUDCQ9Y266 331 aa25.14■■□□□ 1.62
NEIL1-222ENST00000569390 PHF14O94880 888 aa25.13■■□□□ 1.61
NEIL1-222ENST00000569390 RC3H1Q5TC82 1133 aaKnown RBP25.13■■□□□ 1.61
NEIL1-222ENST00000569390 SLC52A2Q9HAB3 445 aa25.13■■□□□ 1.61
NEIL1-222ENST00000569390 PPP2R1AP30153 589 aa25.12■■□□□ 1.61
NEIL1-222ENST00000569390 SLC4A9Q96Q91 983 aa25.12■■□□□ 1.61
NEIL1-222ENST00000569390 MRC1P22897 1456 aa25.11■■□□□ 1.61
NEIL1-222ENST00000569390 RNMTO43148 476 aaKnown RBP25.11■■□□□ 1.61
NEIL1-222ENST00000569390 MSL1Q68DK7 614 aa25.11■■□□□ 1.61
NEIL1-222ENST00000569390 GAS2L2Q8NHY3 880 aa25.11■■□□□ 1.61
NEIL1-222ENST00000569390 CNTNAP4Q9C0A0 1308 aa25.11■■□□□ 1.61
NEIL1-222ENST00000569390 AMIGO3Q86WK7 504 aa25.1■■□□□ 1.61
NEIL1-222ENST00000569390 KLHL34Q8N239 644 aa25.1■■□□□ 1.61
NEIL1-222ENST00000569390 RTCBQ9Y3I0 505 aaKnown RBP25.1■■□□□ 1.61
NEIL1-222ENST00000569390 PTCD1O75127 700 aaKnown RBP25.09■■□□□ 1.61
NEIL1-222ENST00000569390 ADRA2BP18089 450 aa25.09■■□□□ 1.61
NEIL1-222ENST00000569390 LGR6Q9HBX8 967 aa25.09■■□□□ 1.61
NEIL1-222ENST00000569390 ADAMTS7Q9UKP4 1686 aa25.07■■□□□ 1.6
NEIL1-222ENST00000569390 COL5A3P25940 1745 aaPredicted RBP25.06■■□□□ 1.6
NEIL1-222ENST00000569390 TRAPPC3LQ5T215 181 aa25.06■■□□□ 1.6
NEIL1-222ENST00000569390 CICQ96RK0 1608 aaPredicted RBP25.05■■□□□ 1.6
NEIL1-222ENST00000569390 GNAT3A8MTJ3 354 aa25.05■■□□□ 1.6
NEIL1-222ENST00000569390 RPS6KA4O75676 772 aa25.05■■□□□ 1.6
NEIL1-222ENST00000569390 YY1P25490 414 aa25.05■■□□□ 1.6
NEIL1-222ENST00000569390 CD2APQ9Y5K6 639 aa25.05■■□□□ 1.6
NEIL1-222ENST00000569390 RSPH6AQ9H0K4 717 aa25.04■■□□□ 1.6
NEIL1-222ENST00000569390 PRKAR2BP31323 418 aa25.03■■□□□ 1.6
NEIL1-222ENST00000569390 SMIM5Q71RC9 77 aa25.03■■□□□ 1.6
NEIL1-222ENST00000569390 FCHSD2O94868 740 aa25.02■■□□□ 1.6
NEIL1-222ENST00000569390 U2AF1L5P0DN76 240 aaPredicted RBP25.02■■□□□ 1.6
NEIL1-222ENST00000569390 U2AF1Q01081 240 aaKnown RBP eCLIP25.02■■□□□ 1.6
NEIL1-222ENST00000569390 CRKLP46109 303 aaKnown RBP25.01■■□□□ 1.59
NEIL1-222ENST00000569390 GPR162Q16538 588 aa25.01■■□□□ 1.59
NEIL1-222ENST00000569390 VIRMAQ69YN4 1812 aaKnown RBP25■■□□□ 1.59
NEIL1-222ENST00000569390 RFC4P35249 363 aa25■■□□□ 1.59
NEIL1-222ENST00000569390 TEFQ10587 303 aa25■■□□□ 1.59
NEIL1-222ENST00000569390 NLGN1Q8N2Q7 840 aa25■■□□□ 1.59
NEIL1-222ENST00000569390 NLGN2Q8NFZ4 835 aa25■■□□□ 1.59
NEIL1-222ENST00000569390 VSIG10Q8N0Z9 540 aa24.99■■□□□ 1.59
NEIL1-222ENST00000569390 ARHGEF1Q92888 912 aaKnown RBP24.99■■□□□ 1.59
NEIL1-222ENST00000569390 TJP1Q07157 1748 aa24.98■■□□□ 1.59
NEIL1-222ENST00000569390 SLC39A6Q13433 755 aa24.98■■□□□ 1.59
NEIL1-222ENST00000569390 TTC5Q8N0Z6 440 aa24.98■■□□□ 1.59
NEIL1-222ENST00000569390 MYH14Q7Z406 1995 aaKnown RBP24.98■■□□□ 1.59
NEIL1-222ENST00000569390 IL17REQ8NFR9 667 aa24.97■■□□□ 1.59
NEIL1-222ENST00000569390 PHACTR3Q96KR7 559 aa24.97■■□□□ 1.59
NEIL1-222ENST00000569390 KCPQ6ZWJ8 1503 aa24.96■■□□□ 1.59
NEIL1-222ENST00000569390 DNAJC10Q8IXB1 793 aa24.96■■□□□ 1.59
NEIL1-222ENST00000569390 CEMIPQ8WUJ3 1361 aa24.95■■□□□ 1.59
NEIL1-222ENST00000569390 CCDC87Q9NVE4 849 aa24.95■■□□□ 1.58
NEIL1-222ENST00000569390 MMP10P09238 476 aa24.94■■□□□ 1.58
NEIL1-222ENST00000569390 RALBP1Q15311 655 aa24.94■■□□□ 1.58
NEIL1-222ENST00000569390 INTS5Q6P9B9 1019 aaKnown RBP24.94■■□□□ 1.58
NEIL1-222ENST00000569390 PELP1Q8IZL8 1130 aaKnown RBP24.94■■□□□ 1.58
NEIL1-222ENST00000569390 GRIN3BO60391 1043 aa24.93■■□□□ 1.58
NEIL1-222ENST00000569390 NEFMP07197 916 aa24.93■■□□□ 1.58
NEIL1-222ENST00000569390 CYP19A1P11511 503 aaPredicted RBP24.93■■□□□ 1.58
NEIL1-222ENST00000569390 GYS1P13807 737 aa24.93■■□□□ 1.58
NEIL1-222ENST00000569390 ZNF790Q6PG37 636 aa24.92■■□□□ 1.58
NEIL1-222ENST00000569390 RTF1Q92541 710 aaKnown RBP24.92■■□□□ 1.58
NEIL1-222ENST00000569390 UTRNP46939 3433 aa24.92■■□□□ 1.58
NEIL1-222ENST00000569390 UBR2Q8IWV8 1755 aa24.92■■□□□ 1.58
NEIL1-222ENST00000569390 HTATSF1O43719 755 aaKnown RBP24.91■■□□□ 1.58
NEIL1-222ENST00000569390 CHD4Q14839 1912 aa24.9■■□□□ 1.58
NEIL1-222ENST00000569390 USP42Q9H9J4 1324 aaKnown RBP24.9■■□□□ 1.58
NEIL1-222ENST00000569390 C4AP0C0L4 1744 aa24.9■■□□□ 1.58
NEIL1-222ENST00000569390 STARD3NLO95772 234 aa24.9■■□□□ 1.58
NEIL1-222ENST00000569390 TEX13AQ9BXU3 409 aaPredicted RBP24.9■■□□□ 1.58
NEIL1-222ENST00000569390 SOS1Q07889 1333 aaPredicted RBP24.89■■□□□ 1.58
NEIL1-222ENST00000569390 PNNQ9H307 717 aaKnown RBP24.89■■□□□ 1.58
NEIL1-222ENST00000569390 SIPA1L3O60292 1781 aaPredicted RBP24.89■■□□□ 1.57
NEIL1-222ENST00000569390 DDX10Q13206 875 aaKnown RBP24.88■■□□□ 1.57
NEIL1-222ENST00000569390 PARP3Q9Y6F1 533 aa24.88■■□□□ 1.57
NEIL1-222ENST00000569390 HEG1Q9ULI3 1381 aa24.88■■□□□ 1.57
NEIL1-222ENST00000569390 ZPR1O75312 459 aa24.87■■□□□ 1.57
NEIL1-222ENST00000569390 ZNF496Q96IT1 587 aaPredicted RBP24.87■■□□□ 1.57
NEIL1-222ENST00000569390 FMNL2Q96PY5 1086 aa24.87■■□□□ 1.57
NEIL1-222ENST00000569390 BTBD11A6QL63 1104 aa24.86■■□□□ 1.57
NEIL1-222ENST00000569390 YBX3P16989 372 aaKnown RBP eCLIP24.86■■□□□ 1.57
NEIL1-222ENST00000569390 GOLGB1Q14789 3259 aaKnown RBP24.86■■□□□ 1.57
NEIL1-222ENST00000569390 SRP68Q9UHB9 627 aaKnown RBP24.85■■□□□ 1.57
NEIL1-222ENST00000569390 ZBTB1Q9Y2K1 713 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms