RNA–Protein interactions for RNA: ENST00000569124.1

SCAMP2-210, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 4

Gene SCAMP2, Length 538 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-210ENST00000569124 SIK1P57059 783 aa21.12■□□□□ 0.97
SCAMP2-210ENST00000569124 AMIGO3Q86WK7 504 aa21.12■□□□□ 0.97
SCAMP2-210ENST00000569124 MYH14Q7Z406 1995 aaKnown RBP21.11■□□□□ 0.97
SCAMP2-210ENST00000569124 LINC00116Q8NCU8 138 aa21.11■□□□□ 0.97
SCAMP2-210ENST00000569124 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.11■□□□□ 0.97
SCAMP2-210ENST00000569124 EYA1Q99502 592 aa21.1■□□□□ 0.97
SCAMP2-210ENST00000569124 GPBP1L1Q9HC44 474 aaPredicted RBP21.1■□□□□ 0.97
SCAMP2-210ENST00000569124 ARFGEF1Q9Y6D6 1849 aa21.1■□□□□ 0.97
SCAMP2-210ENST00000569124 PLEKHG2Q9H7P9 1386 aa21.1■□□□□ 0.97
SCAMP2-210ENST00000569124 IFNL2Q8IZJ0 200 aa21.09■□□□□ 0.97
SCAMP2-210ENST00000569124 GNPATO15228 680 aa21.08■□□□□ 0.97
SCAMP2-210ENST00000569124 PHKG2P15735 406 aa21.08■□□□□ 0.97
SCAMP2-210ENST00000569124 SMIM5Q71RC9 77 aa21.08■□□□□ 0.97
SCAMP2-210ENST00000569124 SCN11AQ9UI33 1791 aa21.08■□□□□ 0.96
SCAMP2-210ENST00000569124 ATP6V1AP38606 617 aa21.07■□□□□ 0.96
SCAMP2-210ENST00000569124 WWC3Q9ULE0 1092 aa21.07■□□□□ 0.96
SCAMP2-210ENST00000569124 ASAP1Q9ULH1 1129 aa21.07■□□□□ 0.96
SCAMP2-210ENST00000569124 CEP350Q5VT06 3117 aa21.07■□□□□ 0.96
SCAMP2-210ENST00000569124 ITPK1Q13572 414 aa21.05■□□□□ 0.96
SCAMP2-210ENST00000569124 ZNF526Q8TF50 670 aaPredicted RBP21.05■□□□□ 0.96
SCAMP2-210ENST00000569124 POLKQ9UBT6 870 aa21.05■□□□□ 0.96
SCAMP2-210ENST00000569124 KDRP35968 1356 aa21.05■□□□□ 0.96
SCAMP2-210ENST00000569124 EIF4A2Q14240 407 aaKnown RBP21.03■□□□□ 0.96
SCAMP2-210ENST00000569124 TJP1Q07157 1748 aa21.03■□□□□ 0.96
SCAMP2-210ENST00000569124 PXDNLA1KZ92 1463 aa21.02■□□□□ 0.96
SCAMP2-210ENST00000569124 TNNT2P45379 298 aaPredicted RBP21.02■□□□□ 0.96
SCAMP2-210ENST00000569124 DDX10Q13206 875 aaKnown RBP21.02■□□□□ 0.96
SCAMP2-210ENST00000569124 ATG3Q9NT62 314 aa21.02■□□□□ 0.96
SCAMP2-210ENST00000569124 MMP10P09238 476 aa21.01■□□□□ 0.95
SCAMP2-210ENST00000569124 RTCBQ9Y3I0 505 aaKnown RBP21■□□□□ 0.95
SCAMP2-210ENST00000569124 C10orf71Q711Q0 1435 aa21■□□□□ 0.95
SCAMP2-210ENST00000569124 HSP90AB1P08238 724 aaKnown RBP20.99■□□□□ 0.95
SCAMP2-210ENST00000569124 PANK3Q9H999 370 aa20.99■□□□□ 0.95
SCAMP2-210ENST00000569124 RBM42Q9BTD8 480 aaKnown RBP20.98■□□□□ 0.95
SCAMP2-210ENST00000569124 SBF1O95248 1867 aa20.98■□□□□ 0.95
SCAMP2-210ENST00000569124 KDM6AO15550 1401 aaPredicted RBP20.97■□□□□ 0.95
SCAMP2-210ENST00000569124 ERVV-2B6SEH9 535 aa20.97■□□□□ 0.95
SCAMP2-210ENST00000569124 HSPA6P17066 643 aa20.97■□□□□ 0.95
SCAMP2-210ENST00000569124 TRAPPC3LQ5T215 181 aa20.97■□□□□ 0.95
SCAMP2-210ENST00000569124 DCAF5Q96JK2 942 aa20.97■□□□□ 0.95
SCAMP2-210ENST00000569124 ADRA2BP18089 450 aa20.96■□□□□ 0.95
SCAMP2-210ENST00000569124 CNTNAP4Q9C0A0 1308 aa20.96■□□□□ 0.95
SCAMP2-210ENST00000569124 AFDNP55196 1824 aaKnown RBP20.95■□□□□ 0.94
SCAMP2-210ENST00000569124 PLEKHO1Q53GL0 409 aaPredicted RBP20.95■□□□□ 0.94
SCAMP2-210ENST00000569124 ZNF530Q6P9A1 599 aaPredicted RBP20.95■□□□□ 0.94
SCAMP2-210ENST00000569124 NLGN1Q8N2Q7 840 aa20.95■□□□□ 0.94
SCAMP2-210ENST00000569124 TGFB2P61812 414 aa20.94■□□□□ 0.94
SCAMP2-210ENST00000569124 KNSTRNQ9Y448 316 aa20.94■□□□□ 0.94
SCAMP2-210ENST00000569124 CCDC88AQ3V6T2 1871 aa20.93■□□□□ 0.94
SCAMP2-210ENST00000569124 AMOTQ4VCS5 1084 aa20.93■□□□□ 0.94
SCAMP2-210ENST00000569124 RC3H1Q5TC82 1133 aaKnown RBP20.93■□□□□ 0.94
SCAMP2-210ENST00000569124 SLC4A9Q96Q91 983 aa20.93■□□□□ 0.94
SCAMP2-210ENST00000569124 CCDC87Q9NVE4 849 aa20.93■□□□□ 0.94
SCAMP2-210ENST00000569124 BCS1LQ9Y276 419 aa20.93■□□□□ 0.94
SCAMP2-210ENST00000569124 ADAMTS7Q9UKP4 1686 aa20.93■□□□□ 0.94
SCAMP2-210ENST00000569124 WDR90Q96KV7 1748 aa20.92■□□□□ 0.94
SCAMP2-210ENST00000569124 RFC4P35249 363 aa20.92■□□□□ 0.94
SCAMP2-210ENST00000569124 CABP4P57796 275 aa20.92■□□□□ 0.94
SCAMP2-210ENST00000569124 ARHGEF1Q92888 912 aaKnown RBP20.92■□□□□ 0.94
SCAMP2-210ENST00000569124 DLEC1Q9Y238 1755 aa20.92■□□□□ 0.94
SCAMP2-210ENST00000569124 C1orf141Q5JVX7 400 aa20.91■□□□□ 0.94
SCAMP2-210ENST00000569124 IFFO2Q5TF58 517 aa20.91■□□□□ 0.94
SCAMP2-210ENST00000569124 TNRC6CQ9HCJ0 1690 aaKnown RBP20.91■□□□□ 0.94
SCAMP2-210ENST00000569124 PARP3Q9Y6F1 533 aa20.91■□□□□ 0.94
SCAMP2-210ENST00000569124 KIF3CO14782 793 aa20.9■□□□□ 0.94
SCAMP2-210ENST00000569124 RPS6KA4O75676 772 aa20.9■□□□□ 0.94
SCAMP2-210ENST00000569124 GYS1P13807 737 aa20.9■□□□□ 0.94
SCAMP2-210ENST00000569124 A0A0G2JLW4 131 aa20.89■□□□□ 0.93
SCAMP2-210ENST00000569124 MTHFSP49914 203 aa20.88■□□□□ 0.93
SCAMP2-210ENST00000569124 FCHSD2O94868 740 aa20.87■□□□□ 0.93
SCAMP2-210ENST00000569124 DPEP1P16444 411 aa20.87■□□□□ 0.93
SCAMP2-210ENST00000569124 UBR2Q8IWV8 1755 aa20.87■□□□□ 0.93
SCAMP2-210ENST00000569124 PER1O15534 1290 aaPredicted RBP20.86■□□□□ 0.93
SCAMP2-210ENST00000569124 PTCD1O75127 700 aaKnown RBP20.86■□□□□ 0.93
SCAMP2-210ENST00000569124 ARHGAP27Q6ZUM4 889 aa20.86■□□□□ 0.93
SCAMP2-210ENST00000569124 MORC1Q86VD1 984 aa20.86■□□□□ 0.93
SCAMP2-210ENST00000569124 AEBP1Q8IUX7 1158 aa20.86■□□□□ 0.93
SCAMP2-210ENST00000569124 NRXN2Q9P2S2 1712 aa20.85■□□□□ 0.93
SCAMP2-210ENST00000569124 CRKLP46109 303 aaKnown RBP20.85■□□□□ 0.93
SCAMP2-210ENST00000569124 TIAM2Q8IVF5 1701 aa20.84■□□□□ 0.93
SCAMP2-210ENST00000569124 MRC1P22897 1456 aa20.84■□□□□ 0.93
SCAMP2-210ENST00000569124 USP42Q9H9J4 1324 aaKnown RBP20.83■□□□□ 0.93
SCAMP2-210ENST00000569124 DIEXFQ68CQ4 756 aaKnown RBP20.83■□□□□ 0.93
SCAMP2-210ENST00000569124 SULT6B1Q6IMI4 303 aa20.83■□□□□ 0.93
SCAMP2-210ENST00000569124 NFATC2IPQ8NCF5 419 aa20.83■□□□□ 0.93
SCAMP2-210ENST00000569124 TOMM70O94826 608 aa20.82■□□□□ 0.92
SCAMP2-210ENST00000569124 NPC1L1Q9UHC9 1359 aa20.82■□□□□ 0.92
SCAMP2-210ENST00000569124 CACNA1SQ13698 1873 aa20.81■□□□□ 0.92
SCAMP2-210ENST00000569124 APLP1P51693 650 aa20.81■□□□□ 0.92
SCAMP2-210ENST00000569124 PIM2Q9P1W9 311 aa20.81■□□□□ 0.92
SCAMP2-210ENST00000569124 SRP68Q9UHB9 627 aaKnown RBP20.81■□□□□ 0.92
SCAMP2-210ENST00000569124 CNGB1Q14028 1251 aaPredicted RBP20.8■□□□□ 0.92
SCAMP2-210ENST00000569124 AMER1Q5JTC6 1135 aaPredicted RBP20.8■□□□□ 0.92
SCAMP2-210ENST00000569124 CC2D1BQ5T0F9 858 aaKnown RBP20.8■□□□□ 0.92
SCAMP2-210ENST00000569124 FKBP8Q14318 412 aa20.79■□□□□ 0.92
SCAMP2-210ENST00000569124 NMRK2Q9NPI5 230 aa20.79■□□□□ 0.92
SCAMP2-210ENST00000569124 SIPA1L3O60292 1781 aaPredicted RBP20.79■□□□□ 0.92
SCAMP2-210ENST00000569124 KCPQ6ZWJ8 1503 aa20.78■□□□□ 0.92
SCAMP2-210ENST00000569124 DICER1Q9UPY3 1922 aaKnown RBP20.78■□□□□ 0.92
SCAMP2-210ENST00000569124 ANP32CO43423 234 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms