RNA–Protein interactions for RNA: ENST00000568896.1

SYNGR3-205, Transcript of synaptogyrin 3, humanhuman

TSL 5

Gene SYNGR3, Length 533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-205ENST00000568896 HMGB2P26583 209 aaKnown RBP24.65■■□□□ 1.54
SYNGR3-205ENST00000568896 LINC00116Q8NCU8 138 aa24.65■■□□□ 1.54
SYNGR3-205ENST00000568896 ASAP1Q9ULH1 1129 aa24.65■■□□□ 1.54
SYNGR3-205ENST00000568896 KDRP35968 1356 aa24.65■■□□□ 1.54
SYNGR3-205ENST00000568896 PLEKHG2Q9H7P9 1386 aa24.65■■□□□ 1.54
SYNGR3-205ENST00000568896 LOC102724428A0A0B4J2F2 783 aa24.64■■□□□ 1.54
SYNGR3-205ENST00000568896 ZNF316A6NFI3 1004 aaPredicted RBP24.64■■□□□ 1.54
SYNGR3-205ENST00000568896 GIGYF1O75420 1035 aaPredicted RBP24.64■■□□□ 1.54
SYNGR3-205ENST00000568896 SIK1P57059 783 aa24.64■■□□□ 1.54
SYNGR3-205ENST00000568896 C4BP0C0L5 1744 aa24.64■■□□□ 1.53
SYNGR3-205ENST00000568896 PHKG2P15735 406 aa24.63■■□□□ 1.53
SYNGR3-205ENST00000568896 SULT6B1Q6IMI4 303 aa24.63■■□□□ 1.53
SYNGR3-205ENST00000568896 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.63■■□□□ 1.53
SYNGR3-205ENST00000568896 TMOD3Q9NYL9 352 aa24.63■■□□□ 1.53
SYNGR3-205ENST00000568896 ITGB4P16144 1822 aa24.63■■□□□ 1.53
SYNGR3-205ENST00000568896 TAF1LQ8IZX4 1826 aa24.63■■□□□ 1.53
SYNGR3-205ENST00000568896 ITPK1Q13572 414 aa24.62■■□□□ 1.53
SYNGR3-205ENST00000568896 IFNL2Q8IZJ0 200 aa24.61■■□□□ 1.53
SYNGR3-205ENST00000568896 CFAP53Q96M91 514 aa24.61■■□□□ 1.53
SYNGR3-205ENST00000568896 WWC3Q9ULE0 1092 aa24.61■■□□□ 1.53
SYNGR3-205ENST00000568896 ATG3Q9NT62 314 aa24.6■■□□□ 1.53
SYNGR3-205ENST00000568896 ATP6V1AP38606 617 aa24.59■■□□□ 1.53
SYNGR3-205ENST00000568896 SSFA2P28290 1259 aa24.58■■□□□ 1.53
SYNGR3-205ENST00000568896 RALBP1Q15311 655 aa24.58■■□□□ 1.53
SYNGR3-205ENST00000568896 GNPATO15228 680 aa24.57■■□□□ 1.52
SYNGR3-205ENST00000568896 HMOX1P09601 288 aa24.57■■□□□ 1.52
SYNGR3-205ENST00000568896 U2SURPO15042 1029 aaKnown RBP24.56■■□□□ 1.52
SYNGR3-205ENST00000568896 PLEKHO1Q53GL0 409 aaPredicted RBP24.55■■□□□ 1.52
SYNGR3-205ENST00000568896 ATP10DQ9P241 1426 aa24.54■■□□□ 1.52
SYNGR3-205ENST00000568896 UBR3Q6ZT12 1888 aa24.54■■□□□ 1.52
SYNGR3-205ENST00000568896 AMOTQ4VCS5 1084 aa24.54■■□□□ 1.52
SYNGR3-205ENST00000568896 SLC4A9Q96Q91 983 aa24.53■■□□□ 1.52
SYNGR3-205ENST00000568896 ZNF530Q6P9A1 599 aaPredicted RBP24.52■■□□□ 1.52
SYNGR3-205ENST00000568896 NUDCQ9Y266 331 aa24.51■■□□□ 1.51
SYNGR3-205ENST00000568896 ZNF526Q8TF50 670 aaPredicted RBP24.5■■□□□ 1.51
SYNGR3-205ENST00000568896 MYBBP1AQ9BQG0 1328 aaKnown RBP24.5■■□□□ 1.51
SYNGR3-205ENST00000568896 MMP10P09238 476 aa24.49■■□□□ 1.51
SYNGR3-205ENST00000568896 RBM42Q9BTD8 480 aaKnown RBP24.49■■□□□ 1.51
SYNGR3-205ENST00000568896 ERVV-2B6SEH9 535 aa24.48■■□□□ 1.51
SYNGR3-205ENST00000568896 PRKRIP1Q9H875 184 aaPredicted RBP24.48■■□□□ 1.51
SYNGR3-205ENST00000568896 TRAPPC3LQ5T215 181 aa24.47■■□□□ 1.51
SYNGR3-205ENST00000568896 GPBP1L1Q9HC44 474 aaPredicted RBP24.47■■□□□ 1.51
SYNGR3-205ENST00000568896 U2AF1L5P0DN76 240 aaPredicted RBP24.46■■□□□ 1.51
SYNGR3-205ENST00000568896 U2AF1Q01081 240 aaKnown RBP eCLIP24.46■■□□□ 1.51
SYNGR3-205ENST00000568896 C1orf141Q5JVX7 400 aa24.46■■□□□ 1.51
SYNGR3-205ENST00000568896 DCAF5Q96JK2 942 aa24.46■■□□□ 1.51
SYNGR3-205ENST00000568896 RSPH6AQ9H0K4 717 aa24.46■■□□□ 1.51
SYNGR3-205ENST00000568896 RTCBQ9Y3I0 505 aaKnown RBP24.46■■□□□ 1.51
SYNGR3-205ENST00000568896 KDM6AO15550 1401 aaPredicted RBP24.45■■□□□ 1.51
SYNGR3-205ENST00000568896 ADCY9O60503 1353 aa24.45■■□□□ 1.5
SYNGR3-205ENST00000568896 HSP90AB1P08238 724 aaKnown RBP24.45■■□□□ 1.5
SYNGR3-205ENST00000568896 CEP350Q5VT06 3117 aa24.44■■□□□ 1.5
SYNGR3-205ENST00000568896 CABP4P57796 275 aa24.44■■□□□ 1.5
SYNGR3-205ENST00000568896 ARHGEF1Q92888 912 aaKnown RBP24.44■■□□□ 1.5
SYNGR3-205ENST00000568896 PRKAR2BP31323 418 aa24.43■■□□□ 1.5
SYNGR3-205ENST00000568896 MTHFSDQ2M296 383 aaKnown RBP24.43■■□□□ 1.5
SYNGR3-205ENST00000568896 AKAP4Q5JQC9 854 aa24.42■■□□□ 1.5
SYNGR3-205ENST00000568896 RC3H1Q5TC82 1133 aaKnown RBP24.42■■□□□ 1.5
SYNGR3-205ENST00000568896 A0A0G2JLW4 131 aa24.41■■□□□ 1.5
SYNGR3-205ENST00000568896 NLGN1Q8N2Q7 840 aa24.41■■□□□ 1.5
SYNGR3-205ENST00000568896 FCHSD2O94868 740 aa24.4■■□□□ 1.5
SYNGR3-205ENST00000568896 PTCD1O75127 700 aaKnown RBP24.39■■□□□ 1.49
SYNGR3-205ENST00000568896 RPS6KA4O75676 772 aa24.39■■□□□ 1.49
SYNGR3-205ENST00000568896 GYS1P13807 737 aa24.39■■□□□ 1.49
SYNGR3-205ENST00000568896 NFATC2IPQ8NCF5 419 aa24.39■■□□□ 1.49
SYNGR3-205ENST00000568896 PXDNLA1KZ92 1463 aa24.38■■□□□ 1.49
SYNGR3-205ENST00000568896 CNTNAP4Q9C0A0 1308 aa24.38■■□□□ 1.49
SYNGR3-205ENST00000568896 RFC4P35249 363 aa24.38■■□□□ 1.49
SYNGR3-205ENST00000568896 PHACTR3Q96KR7 559 aa24.38■■□□□ 1.49
SYNGR3-205ENST00000568896 ADRA2BP18089 450 aa24.37■■□□□ 1.49
SYNGR3-205ENST00000568896 TGFB2P61812 414 aa24.37■■□□□ 1.49
SYNGR3-205ENST00000568896 GAS2L2Q8NHY3 880 aa24.37■■□□□ 1.49
SYNGR3-205ENST00000568896 CICQ96RK0 1608 aaPredicted RBP24.36■■□□□ 1.49
SYNGR3-205ENST00000568896 DPEP1P16444 411 aa24.36■■□□□ 1.49
SYNGR3-205ENST00000568896 BCS1LQ9Y276 419 aa24.36■■□□□ 1.49
SYNGR3-205ENST00000568896 SCN11AQ9UI33 1791 aa24.36■■□□□ 1.49
SYNGR3-205ENST00000568896 ADAMTS7Q9UKP4 1686 aa24.35■■□□□ 1.49
SYNGR3-205ENST00000568896 CCDC87Q9NVE4 849 aa24.34■■□□□ 1.49
SYNGR3-205ENST00000568896 SRP68Q9UHB9 627 aaKnown RBP24.34■■□□□ 1.49
SYNGR3-205ENST00000568896 MRC1P22897 1456 aa24.33■■□□□ 1.49
SYNGR3-205ENST00000568896 RNMTO43148 476 aaKnown RBP24.33■■□□□ 1.49
SYNGR3-205ENST00000568896 LGR6Q9HBX8 967 aa24.33■■□□□ 1.49
SYNGR3-205ENST00000568896 PARP3Q9Y6F1 533 aa24.33■■□□□ 1.49
SYNGR3-205ENST00000568896 C10orf71Q711Q0 1435 aa24.33■■□□□ 1.49
SYNGR3-205ENST00000568896 KIF3CO14782 793 aa24.32■■□□□ 1.48
SYNGR3-205ENST00000568896 CRKLP46109 303 aaKnown RBP24.32■■□□□ 1.48
SYNGR3-205ENST00000568896 ARHGAP27Q6ZUM4 889 aa24.32■■□□□ 1.48
SYNGR3-205ENST00000568896 GNAT3A8MTJ3 354 aa24.31■■□□□ 1.48
SYNGR3-205ENST00000568896 HSPA6P17066 643 aa24.31■■□□□ 1.48
SYNGR3-205ENST00000568896 ZNF831Q5JPB2 1677 aa24.3■■□□□ 1.48
SYNGR3-205ENST00000568896 COL5A3P25940 1745 aaPredicted RBP24.3■■□□□ 1.48
SYNGR3-205ENST00000568896 KIAA1551Q9HCM1 1747 aa24.3■■□□□ 1.48
SYNGR3-205ENST00000568896 FKBP8Q14318 412 aa24.3■■□□□ 1.48
SYNGR3-205ENST00000568896 PLEKHF1Q96S99 279 aa24.3■■□□□ 1.48
SYNGR3-205ENST00000568896 N4BP2Q86UW6 1770 aaPredicted RBP24.29■■□□□ 1.48
SYNGR3-205ENST00000568896 MYH14Q7Z406 1995 aaKnown RBP24.29■■□□□ 1.48
SYNGR3-205ENST00000568896 ANP32CO43423 234 aa24.29■■□□□ 1.48
SYNGR3-205ENST00000568896 KCNA3P22001 575 aa24.29■■□□□ 1.48
SYNGR3-205ENST00000568896 INTS5Q6P9B9 1019 aaKnown RBP24.29■■□□□ 1.48
SYNGR3-205ENST00000568896 SLC52A2Q9HAB3 445 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms