RNA–Protein interactions for RNA: ENST00000568468.5

GINS3-210, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-210ENST00000568468 MAP2P11137 1827 aaKnown RBP8.07□□□□□ -1.12
GINS3-210ENST00000568468 CPDO75976 1380 aa8.07□□□□□ -1.12
GINS3-210ENST00000568468 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.06□□□□□ -1.12
GINS3-210ENST00000568468 PRKAR2BP31323 418 aa8.06□□□□□ -1.12
GINS3-210ENST00000568468 PLCB2Q00722 1185 aa8.06□□□□□ -1.12
GINS3-210ENST00000568468 NBPF6Q5VWK0 638 aa8.06□□□□□ -1.12
GINS3-210ENST00000568468 SULT6B1Q6IMI4 303 aa8.06□□□□□ -1.12
GINS3-210ENST00000568468 UNC5CLQ8IV45 518 aa8.06□□□□□ -1.12
GINS3-210ENST00000568468 NBPF4Q96M43 638 aa8.06□□□□□ -1.12
GINS3-210ENST00000568468 QTRT2Q9H974 415 aaKnown RBP8.06□□□□□ -1.12
GINS3-210ENST00000568468 TRPC5Q9UL62 973 aaPredicted RBP8.06□□□□□ -1.12
GINS3-210ENST00000568468 RRP7AQ9Y3A4 280 aaKnown RBP8.06□□□□□ -1.12
GINS3-210ENST00000568468 COL14A1Q05707 1796 aaKnown RBP8.06□□□□□ -1.12
GINS3-210ENST00000568468 NRAPQ86VF7 1730 aa8.06□□□□□ -1.12
GINS3-210ENST00000568468 NWD2Q9ULI1 1742 aa8.06□□□□□ -1.12
GINS3-210ENST00000568468 PLCH1Q4KWH8 1693 aa8.05□□□□□ -1.12
GINS3-210ENST00000568468 LTN1O94822 1766 aa8.05□□□□□ -1.12
GINS3-210ENST00000568468 SNPHO15079 494 aa8.05□□□□□ -1.12
GINS3-210ENST00000568468 RBM6P78332 1123 aaKnown RBP8.05□□□□□ -1.12
GINS3-210ENST00000568468 PAXIP1Q6ZW49 1069 aaPredicted RBP8.05□□□□□ -1.12
GINS3-210ENST00000568468 RSPH6AQ9H0K4 717 aa8.05□□□□□ -1.12
GINS3-210ENST00000568468 NLRP2Q9NX02 1062 aa8.05□□□□□ -1.12
GINS3-210ENST00000568468 BTG4Q9NY30 223 aa8.05□□□□□ -1.12
GINS3-210ENST00000568468 LMO7Q8WWI1 1683 aa8.05□□□□□ -1.12
GINS3-210ENST00000568468 CAMTA1Q9Y6Y1 1673 aa8.05□□□□□ -1.12
GINS3-210ENST00000568468 ERBB3P21860 1342 aa8.04□□□□□ -1.12
GINS3-210ENST00000568468 BLMP54132 1417 aaPredicted RBP8.04□□□□□ -1.12
GINS3-210ENST00000568468 APAF1O14727 1248 aa8.04□□□□□ -1.12
GINS3-210ENST00000568468 RXRBP28702 533 aa8.04□□□□□ -1.12
GINS3-210ENST00000568468 EVA1CP58658 441 aa8.04□□□□□ -1.12
GINS3-210ENST00000568468 NEUROD2Q15784 382 aa8.04□□□□□ -1.12
GINS3-210ENST00000568468 VPS72Q15906 364 aa8.04□□□□□ -1.12
GINS3-210ENST00000568468 LARP1Q6PKG0 1096 aaKnown RBP8.04□□□□□ -1.12
GINS3-210ENST00000568468 TMEM92Q6UXU6 159 aa8.04□□□□□ -1.12
GINS3-210ENST00000568468 KIF24Q5T7B8 1368 aa8.04□□□□□ -1.12
GINS3-210ENST00000568468 IGSF1Q8N6C5 1336 aa8.03□□□□□ -1.12
GINS3-210ENST00000568468 RGS12O14924 1447 aa8.03□□□□□ -1.12
GINS3-210ENST00000568468 COL18A1P39060 1754 aa8.03□□□□□ -1.12
GINS3-210ENST00000568468 GLI3P10071 1580 aa8.03□□□□□ -1.12
GINS3-210ENST00000568468 KIF3CO14782 793 aa8.03□□□□□ -1.12
GINS3-210ENST00000568468 TOM1L2Q6ZVM7 507 aa8.03□□□□□ -1.12
GINS3-210ENST00000568468 RUNDC1Q96C34 613 aa8.03□□□□□ -1.12
GINS3-210ENST00000568468 GJD4Q96KN9 370 aaPredicted RBP8.03□□□□□ -1.12
GINS3-210ENST00000568468 PHACTR3Q96KR7 559 aa8.03□□□□□ -1.12
GINS3-210ENST00000568468 PLEKHF1Q96S99 279 aa8.03□□□□□ -1.12
GINS3-210ENST00000568468 USP35Q9P2H5 1018 aa8.03□□□□□ -1.12
GINS3-210ENST00000568468 COL5A2P05997 1499 aaPredicted RBP8.02□□□□□ -1.13
GINS3-210ENST00000568468 POTEMA6NI47 508 aa8.02□□□□□ -1.13
GINS3-210ENST00000568468 TCP11L2Q8N4U5 519 aa8.02□□□□□ -1.13
GINS3-210ENST00000568468 FAM163AQ96GL9 167 aaPredicted RBP8.02□□□□□ -1.13
GINS3-210ENST00000568468 ABCC6O95255 1503 aa8.02□□□□□ -1.13
GINS3-210ENST00000568468 WDR17Q8IZU2 1322 aa8.02□□□□□ -1.13
GINS3-210ENST00000568468 MAPK8IP3Q9UPT6 1336 aa8.02□□□□□ -1.13
GINS3-210ENST00000568468 SOCS7O14512 581 aa8.01□□□□□ -1.13
GINS3-210ENST00000568468 FCHSD2O94868 740 aa8.01□□□□□ -1.13
GINS3-210ENST00000568468 RGPD5Q99666 1765 aa8.01□□□□□ -1.13
GINS3-210ENST00000568468 SPATA31A5Q5VU36 1347 aa8.01□□□□□ -1.13
GINS3-210ENST00000568468 SPATA31A7Q8IWB4 1347 aa8.01□□□□□ -1.13
GINS3-210ENST00000568468 RGPD1P0DJD0 1748 aa8□□□□□ -1.13
GINS3-210ENST00000568468 ONECUT3O60422 494 aaPredicted RBP8□□□□□ -1.13
GINS3-210ENST00000568468 TMPOP42166 694 aaKnown RBP8□□□□□ -1.13
GINS3-210ENST00000568468 CFAP44Q96MT7 982 aa8□□□□□ -1.13
GINS3-210ENST00000568468 THUMPD2Q9BTF0 503 aaKnown RBP8□□□□□ -1.13
GINS3-210ENST00000568468 CCDC9Q9Y3X0 531 aaKnown RBP8□□□□□ -1.13
GINS3-210ENST00000568468 SPATA31A1Q5TZJ5 1347 aa8□□□□□ -1.13
GINS3-210ENST00000568468 RGPD2P0DJD1 1756 aa7.99□□□□□ -1.13
GINS3-210ENST00000568468 MEGF6O75095 1541 aa7.99□□□□□ -1.13
GINS3-210ENST00000568468 RIPK4P57078 832 aa7.99□□□□□ -1.13
GINS3-210ENST00000568468 DCTN1Q14203 1278 aa7.99□□□□□ -1.13
GINS3-210ENST00000568468 NFE2L2Q16236 605 aa7.99□□□□□ -1.13
GINS3-210ENST00000568468 MTHFSDQ2M296 383 aaKnown RBP7.99□□□□□ -1.13
GINS3-210ENST00000568468 LCE2DQ5TA82 110 aaPredicted RBP7.99□□□□□ -1.13
GINS3-210ENST00000568468 CRISPLD2Q9H0B8 497 aa7.99□□□□□ -1.13
GINS3-210ENST00000568468 KDRP35968 1356 aa7.98□□□□□ -1.13
GINS3-210ENST00000568468 CRB1P82279 1406 aa7.98□□□□□ -1.13
GINS3-210ENST00000568468 NCAPD2Q15021 1401 aa7.98□□□□□ -1.13
GINS3-210ENST00000568468 NEFMP07197 916 aa7.98□□□□□ -1.13
GINS3-210ENST00000568468 TATP17735 454 aaPredicted RBP7.98□□□□□ -1.13
GINS3-210ENST00000568468 ZNF530Q6P9A1 599 aaPredicted RBP7.98□□□□□ -1.13
GINS3-210ENST00000568468 POTEGQ6S5H5 508 aa7.98□□□□□ -1.13
GINS3-210ENST00000568468 RAPGEF4Q8WZA2 1011 aa7.98□□□□□ -1.13
GINS3-210ENST00000568468 CDCA7LQ96GN5 454 aa7.98□□□□□ -1.13
GINS3-210ENST00000568468 CARD10Q9BWT7 1032 aa7.98□□□□□ -1.13
GINS3-210ENST00000568468 THSD7AQ9UPZ6 1657 aa7.98□□□□□ -1.13
GINS3-210ENST00000568468 FAM98CQ17RN3 349 aaKnown RBP7.97□□□□□ -1.13
GINS3-210ENST00000568468 BARGINQ6ZT62 677 aa7.97□□□□□ -1.13
GINS3-210ENST00000568468 MCM10Q7L590 875 aa7.97□□□□□ -1.13
GINS3-210ENST00000568468 SEPT12Q8IYM1 358 aa7.97□□□□□ -1.13
GINS3-210ENST00000568468 PNNQ9H307 717 aaKnown RBP7.97□□□□□ -1.13
GINS3-210ENST00000568468 TSHZ2Q9NRE2 1034 aa7.97□□□□□ -1.13
GINS3-210ENST00000568468 FAM208AQ9UK61 1670 aaKnown RBP7.97□□□□□ -1.13
GINS3-210ENST00000568468 ZBED9Q6R2W3 1325 aa7.97□□□□□ -1.13
GINS3-210ENST00000568468 ST18O60284 1047 aa7.96□□□□□ -1.14
GINS3-210ENST00000568468 IL2RBP14784 551 aa7.96□□□□□ -1.14
GINS3-210ENST00000568468 PLEKHO1Q53GL0 409 aaPredicted RBP7.96□□□□□ -1.14
GINS3-210ENST00000568468 WWC1Q8IX03 1113 aa7.96□□□□□ -1.14
GINS3-210ENST00000568468 GPHNQ9NQX3 736 aaPredicted RBP7.96□□□□□ -1.14
GINS3-210ENST00000568468 PCDH10Q9P2E7 1040 aa7.96□□□□□ -1.14
GINS3-210ENST00000568468 THRAP3Q9Y2W1 955 aaKnown RBP7.96□□□□□ -1.14
GINS3-210ENST00000568468 DISP2A7MBM2 1401 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms