RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 RTL1A6NKG5 1358 aa6.42□□□□□ -1.38
HERPUD1-213ENST00000568358 KIF20BQ96Q89 1820 aa6.41□□□□□ -1.38
HERPUD1-213ENST00000568358 YY1P25490 414 aa6.41□□□□□ -1.38
HERPUD1-213ENST00000568358 PRIM1P49642 420 aaKnown RBP6.41□□□□□ -1.38
HERPUD1-213ENST00000568358 EIF4G2P78344 907 aaKnown RBP eCLIP6.41□□□□□ -1.38
HERPUD1-213ENST00000568358 MTFR1LQ9H019 292 aa6.41□□□□□ -1.38
HERPUD1-213ENST00000568358 ANO8Q9HCE9 1232 aaPredicted RBP6.41□□□□□ -1.38
HERPUD1-213ENST00000568358 TFCP2L1Q9NZI6 479 aa6.41□□□□□ -1.38
HERPUD1-213ENST00000568358 POLD1P28340 1107 aa6.4□□□□□ -1.38
HERPUD1-213ENST00000568358 NEUROD2Q15784 382 aa6.4□□□□□ -1.38
HERPUD1-213ENST00000568358 HSP90AB2PQ58FF8 381 aa6.4□□□□□ -1.38
HERPUD1-213ENST00000568358 NBPF6Q5VWK0 638 aa6.4□□□□□ -1.38
HERPUD1-213ENST00000568358 MIER1Q8N108 512 aa6.4□□□□□ -1.38
HERPUD1-213ENST00000568358 SLC16A10Q8TF71 515 aa6.4□□□□□ -1.38
HERPUD1-213ENST00000568358 ZC3H15Q8WU90 426 aaKnown RBP6.4□□□□□ -1.38
HERPUD1-213ENST00000568358 NBPF4Q96M43 638 aa6.4□□□□□ -1.38
HERPUD1-213ENST00000568358 FLT4P35916 1363 aa6.4□□□□□ -1.39
HERPUD1-213ENST00000568358 KIF24Q5T7B8 1368 aa6.4□□□□□ -1.39
HERPUD1-213ENST00000568358 USHBP1Q8N6Y0 703 aa6.39□□□□□ -1.39
HERPUD1-213ENST00000568358 PDGFDQ9GZP0 370 aaPredicted RBP6.39□□□□□ -1.39
HERPUD1-213ENST00000568358 ZBTB47Q9UFB7 747 aaPredicted RBP6.39□□□□□ -1.39
HERPUD1-213ENST00000568358 CCNL1Q9UK58 526 aaPredicted RBP6.39□□□□□ -1.39
HERPUD1-213ENST00000568358 SPG7Q9UQ90 795 aa6.39□□□□□ -1.39
HERPUD1-213ENST00000568358 PCDH11XQ9BZA7 1347 aa6.39□□□□□ -1.39
HERPUD1-213ENST00000568358 PCDH11YQ9BZA8 1340 aa6.39□□□□□ -1.39
HERPUD1-213ENST00000568358 INSRP06213 1382 aa6.39□□□□□ -1.39
HERPUD1-213ENST00000568358 TNNT2P45379 298 aaPredicted RBP6.38□□□□□ -1.39
HERPUD1-213ENST00000568358 MPRIPQ6WCQ1 1025 aa6.38□□□□□ -1.39
HERPUD1-213ENST00000568358 SMARCC1Q92922 1105 aaPredicted RBP6.38□□□□□ -1.39
HERPUD1-213ENST00000568358 SYT17Q9BSW7 474 aa6.38□□□□□ -1.39
HERPUD1-213ENST00000568358 CARD14Q9BXL6 1004 aa6.38□□□□□ -1.39
HERPUD1-213ENST00000568358 FHDC1Q9C0D6 1143 aaPredicted RBP6.38□□□□□ -1.39
HERPUD1-213ENST00000568358 TSPYL2Q9H2G4 693 aaPredicted RBP6.38□□□□□ -1.39
HERPUD1-213ENST00000568358 C1orf115Q9H7X2 142 aa6.38□□□□□ -1.39
HERPUD1-213ENST00000568358 LRRC4BQ9NT99 713 aa6.38□□□□□ -1.39
HERPUD1-213ENST00000568358 NSD3Q9BZ95 1437 aa6.38□□□□□ -1.39
HERPUD1-213ENST00000568358 CASZ1Q86V15 1759 aa6.38□□□□□ -1.39
HERPUD1-213ENST00000568358 CHD4Q14839 1912 aa6.38□□□□□ -1.39
HERPUD1-213ENST00000568358 WASHC2AQ641Q2 1341 aa6.37□□□□□ -1.39
HERPUD1-213ENST00000568358 PTGER2P43116 358 aa6.37□□□□□ -1.39
HERPUD1-213ENST00000568358 PLCD3Q8N3E9 789 aa6.37□□□□□ -1.39
HERPUD1-213ENST00000568358 FLAD1Q8NFF5 587 aa6.37□□□□□ -1.39
HERPUD1-213ENST00000568358 KCNV2Q8TDN2 545 aa6.37□□□□□ -1.39
HERPUD1-213ENST00000568358 EMILIN1Q9Y6C2 1016 aa6.37□□□□□ -1.39
HERPUD1-213ENST00000568358 DOT1LQ8TEK3 1739 aa6.36□□□□□ -1.39
HERPUD1-213ENST00000568358 HSPA5P11021 654 aaKnown RBP6.36□□□□□ -1.39
HERPUD1-213ENST00000568358 KCNQ4P56696 695 aa6.36□□□□□ -1.39
HERPUD1-213ENST00000568358 GPR162Q16538 588 aa6.36□□□□□ -1.39
HERPUD1-213ENST00000568358 ZNF827Q17R98 1081 aa6.36□□□□□ -1.39
HERPUD1-213ENST00000568358 PANK3Q9H999 370 aa6.36□□□□□ -1.39
HERPUD1-213ENST00000568358 KNSTRNQ9Y448 316 aa6.36□□□□□ -1.39
HERPUD1-213ENST00000568358 ITGB4P16144 1822 aa6.36□□□□□ -1.39
HERPUD1-213ENST00000568358 LY75O60449 1722 aa6.36□□□□□ -1.39
HERPUD1-213ENST00000568358 QSER1Q2KHR3 1735 aa6.36□□□□□ -1.39
HERPUD1-213ENST00000568358 MEGF6O75095 1541 aa6.35□□□□□ -1.39
HERPUD1-213ENST00000568358 HSP90AB1P08238 724 aaKnown RBP6.35□□□□□ -1.39
HERPUD1-213ENST00000568358 MORC1Q86VD1 984 aa6.35□□□□□ -1.39
HERPUD1-213ENST00000568358 IFNL2Q8IZJ0 200 aa6.35□□□□□ -1.39
HERPUD1-213ENST00000568358 PELP1Q8IZL8 1130 aaKnown RBP6.35□□□□□ -1.39
HERPUD1-213ENST00000568358 MS4A3Q96HJ5 214 aa6.35□□□□□ -1.39
HERPUD1-213ENST00000568358 EYA1Q99502 592 aa6.35□□□□□ -1.39
HERPUD1-213ENST00000568358 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP6.35□□□□□ -1.39
HERPUD1-213ENST00000568358 TMOD3Q9NYL9 352 aa6.35□□□□□ -1.39
HERPUD1-213ENST00000568358 POLKQ9UBT6 870 aa6.35□□□□□ -1.39
HERPUD1-213ENST00000568358 CIZ1Q9ULV3 898 aaPredicted RBP6.35□□□□□ -1.39
HERPUD1-213ENST00000568358 SHANK3Q9BYB0 1731 aa6.35□□□□□ -1.39
HERPUD1-213ENST00000568358 MYOM1P52179 1685 aa6.35□□□□□ -1.39
HERPUD1-213ENST00000568358 PNPLA7Q6ZV29 1317 aa6.34□□□□□ -1.39
HERPUD1-213ENST00000568358 CYP27B1O15528 508 aa6.34□□□□□ -1.39
HERPUD1-213ENST00000568358 PLEKHO1Q53GL0 409 aaPredicted RBP6.34□□□□□ -1.39
HERPUD1-213ENST00000568358 ASTLQ6HA08 431 aaPredicted RBP6.34□□□□□ -1.39
HERPUD1-213ENST00000568358 AK7Q96M32 723 aa6.34□□□□□ -1.39
HERPUD1-213ENST00000568358 SGIP1Q9BQI5 828 aa6.34□□□□□ -1.39
HERPUD1-213ENST00000568358 SLC24A3Q9HC58 644 aa6.34□□□□□ -1.39
HERPUD1-213ENST00000568358 ANKRD26Q9UPS8 1709 aa6.33□□□□□ -1.4
HERPUD1-213ENST00000568358 NSD2O96028 1365 aa6.33□□□□□ -1.4
HERPUD1-213ENST00000568358 PALLDQ8WX93 1383 aa6.33□□□□□ -1.4
HERPUD1-213ENST00000568358 GRIN3BO60391 1043 aa6.33□□□□□ -1.4
HERPUD1-213ENST00000568358 ATP6V1AP38606 617 aa6.33□□□□□ -1.4
HERPUD1-213ENST00000568358 EIF4A2Q14240 407 aaKnown RBP6.33□□□□□ -1.4
HERPUD1-213ENST00000568358 AMOTQ4VCS5 1084 aa6.33□□□□□ -1.4
HERPUD1-213ENST00000568358 C1orf141Q5JVX7 400 aa6.33□□□□□ -1.4
HERPUD1-213ENST00000568358 COL23A1Q86Y22 540 aaPredicted RBP6.33□□□□□ -1.4
HERPUD1-213ENST00000568358 SLC39A7Q92504 469 aa6.33□□□□□ -1.4
HERPUD1-213ENST00000568358 PIGBQ92521 554 aa6.33□□□□□ -1.4
HERPUD1-213ENST00000568358 RYDENQ9NUL5 291 aaKnown RBP6.33□□□□□ -1.4
HERPUD1-213ENST00000568358 TAF1LQ8IZX4 1826 aa6.33□□□□□ -1.4
HERPUD1-213ENST00000568358 PAPPAQ13219 1627 aa6.32□□□□□ -1.4
HERPUD1-213ENST00000568358 TUBGCP6Q96RT7 1819 aa6.32□□□□□ -1.4
HERPUD1-213ENST00000568358 LOC102724428A0A0B4J2F2 783 aa6.32□□□□□ -1.4
HERPUD1-213ENST00000568358 ERVV-2B6SEH9 535 aa6.32□□□□□ -1.4
HERPUD1-213ENST00000568358 ZMYND10O75800 440 aa6.32□□□□□ -1.4
HERPUD1-213ENST00000568358 C7P10643 843 aa6.32□□□□□ -1.4
HERPUD1-213ENST00000568358 PHKG2P15735 406 aa6.32□□□□□ -1.4
HERPUD1-213ENST00000568358 SIK1P57059 783 aa6.32□□□□□ -1.4
HERPUD1-213ENST00000568358 CABP4P57796 275 aa6.32□□□□□ -1.4
HERPUD1-213ENST00000568358 NECTIN2Q92692 538 aa6.32□□□□□ -1.4
HERPUD1-213ENST00000568358 DCAF5Q96JK2 942 aa6.32□□□□□ -1.4
HERPUD1-213ENST00000568358 PKD1L3Q7Z443 1732 aa6.32□□□□□ -1.4
HERPUD1-213ENST00000568358 C5P01031 1676 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms