RNA–Protein interactions for RNA: ENST00000568080.1

GSE1-213, Transcript of Gse1 coiled-coil protein, humanhuman

TSL 5

Gene GSE1, Length 289 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSE1-213ENST00000568080 ATG3Q9NT62 314 aa20.09■□□□□ 0.81
GSE1-213ENST00000568080 COL24A1Q17RW2 1714 aa20.08■□□□□ 0.81
GSE1-213ENST00000568080 MAP3K5Q99683 1374 aa20.08■□□□□ 0.8
GSE1-213ENST00000568080 LINC00116Q8NCU8 138 aa20.07■□□□□ 0.8
GSE1-213ENST00000568080 KDRP35968 1356 aa20.07■□□□□ 0.8
GSE1-213ENST00000568080 GOLGB1Q14789 3259 aaKnown RBP20.07■□□□□ 0.8
GSE1-213ENST00000568080 DIAPH1O60610 1272 aaKnown RBP20.06■□□□□ 0.8
GSE1-213ENST00000568080 RBM42Q9BTD8 480 aaKnown RBP20.06■□□□□ 0.8
GSE1-213ENST00000568080 UBR3Q6ZT12 1888 aa20.05■□□□□ 0.8
GSE1-213ENST00000568080 KDM6AO15550 1401 aaPredicted RBP20.05■□□□□ 0.8
GSE1-213ENST00000568080 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.05■□□□□ 0.8
GSE1-213ENST00000568080 HMOX1P09601 288 aa20.05■□□□□ 0.8
GSE1-213ENST00000568080 GNPATO15228 680 aa20.04■□□□□ 0.8
GSE1-213ENST00000568080 ITPK1Q13572 414 aa20.04■□□□□ 0.8
GSE1-213ENST00000568080 GPR162Q16538 588 aa20.04■□□□□ 0.8
GSE1-213ENST00000568080 PELP1Q8IZL8 1130 aaKnown RBP20.04■□□□□ 0.8
GSE1-213ENST00000568080 SSFA2P28290 1259 aa20.03■□□□□ 0.8
GSE1-213ENST00000568080 NPC1L1Q9UHC9 1359 aa20.03■□□□□ 0.8
GSE1-213ENST00000568080 SMIM5Q71RC9 77 aa20.02■□□□□ 0.8
GSE1-213ENST00000568080 AMIGO3Q86WK7 504 aa20.02■□□□□ 0.8
GSE1-213ENST00000568080 AKAP4Q5JQC9 854 aa20.01■□□□□ 0.79
GSE1-213ENST00000568080 NFATC2IPQ8NCF5 419 aa20.01■□□□□ 0.79
GSE1-213ENST00000568080 U2SURPO15042 1029 aaKnown RBP20■□□□□ 0.79
GSE1-213ENST00000568080 NLGN2Q8NFZ4 835 aa20■□□□□ 0.79
GSE1-213ENST00000568080 SCN11AQ9UI33 1791 aa20■□□□□ 0.79
GSE1-213ENST00000568080 PTCD1O75127 700 aaKnown RBP19.99■□□□□ 0.79
GSE1-213ENST00000568080 CHD4Q14839 1912 aa19.98■□□□□ 0.79
GSE1-213ENST00000568080 RTCBQ9Y3I0 505 aaKnown RBP19.98■□□□□ 0.79
GSE1-213ENST00000568080 TRAPPC3LQ5T215 181 aa19.97■□□□□ 0.79
GSE1-213ENST00000568080 SLC4A9Q96Q91 983 aa19.97■□□□□ 0.79
GSE1-213ENST00000568080 ZNF831Q5JPB2 1677 aa19.97■□□□□ 0.79
GSE1-213ENST00000568080 CFAP53Q96M91 514 aa19.96■□□□□ 0.79
GSE1-213ENST00000568080 VIRMAQ69YN4 1812 aaKnown RBP19.96■□□□□ 0.79
GSE1-213ENST00000568080 MTHFSDQ2M296 383 aaKnown RBP19.95■□□□□ 0.78
GSE1-213ENST00000568080 SLC52A2Q9HAB3 445 aa19.95■□□□□ 0.78
GSE1-213ENST00000568080 LGR6Q9HBX8 967 aa19.95■□□□□ 0.78
GSE1-213ENST00000568080 CD2APQ9Y5K6 639 aa19.95■□□□□ 0.78
GSE1-213ENST00000568080 COL5A3P25940 1745 aaPredicted RBP19.95■□□□□ 0.78
GSE1-213ENST00000568080 RC3H1Q5TC82 1133 aaKnown RBP19.94■□□□□ 0.78
GSE1-213ENST00000568080 COL3A1P02461 1466 aaPredicted RBP19.93■□□□□ 0.78
GSE1-213ENST00000568080 RNMTO43148 476 aaKnown RBP19.93■□□□□ 0.78
GSE1-213ENST00000568080 CNTNAP4Q9C0A0 1308 aa19.93■□□□□ 0.78
GSE1-213ENST00000568080 ADRA2BP18089 450 aa19.92■□□□□ 0.78
GSE1-213ENST00000568080 RFC4P35249 363 aa19.92■□□□□ 0.78
GSE1-213ENST00000568080 RPS6KA4O75676 772 aa19.9■□□□□ 0.78
GSE1-213ENST00000568080 GAS2L2Q8NHY3 880 aa19.9■□□□□ 0.78
GSE1-213ENST00000568080 ARHGEF1Q92888 912 aaKnown RBP19.9■□□□□ 0.78
GSE1-213ENST00000568080 NUDCQ9Y266 331 aa19.9■□□□□ 0.78
GSE1-213ENST00000568080 MYH14Q7Z406 1995 aaKnown RBP19.9■□□□□ 0.78
GSE1-213ENST00000568080 GRIN3BO60391 1043 aa19.89■□□□□ 0.77
GSE1-213ENST00000568080 MMP10P09238 476 aa19.89■□□□□ 0.77
GSE1-213ENST00000568080 CRKLP46109 303 aaKnown RBP19.89■□□□□ 0.77
GSE1-213ENST00000568080 SLC39A6Q13433 755 aa19.89■□□□□ 0.77
GSE1-213ENST00000568080 NLGN1Q8N2Q7 840 aa19.89■□□□□ 0.77
GSE1-213ENST00000568080 PPP2R1AP30153 589 aa19.88■□□□□ 0.77
GSE1-213ENST00000568080 TJP1Q07157 1748 aa19.88■□□□□ 0.77
GSE1-213ENST00000568080 MRC1P22897 1456 aa19.87■□□□□ 0.77
GSE1-213ENST00000568080 GNAT3A8MTJ3 354 aa19.87■□□□□ 0.77
GSE1-213ENST00000568080 YBX3P16989 372 aaKnown RBP eCLIP19.87■□□□□ 0.77
GSE1-213ENST00000568080 TEFQ10587 303 aa19.86■□□□□ 0.77
GSE1-213ENST00000568080 DNAJC10Q8IXB1 793 aa19.86■□□□□ 0.77
GSE1-213ENST00000568080 TTC5Q8N0Z6 440 aa19.86■□□□□ 0.77
GSE1-213ENST00000568080 ZNF784Q8NCA9 323 aaPredicted RBP19.86■□□□□ 0.77
GSE1-213ENST00000568080 C4AP0C0L4 1744 aa19.85■□□□□ 0.77
GSE1-213ENST00000568080 U2AF1L5P0DN76 240 aaPredicted RBP19.85■□□□□ 0.77
GSE1-213ENST00000568080 PRKAR2BP31323 418 aa19.85■□□□□ 0.77
GSE1-213ENST00000568080 U2AF1Q01081 240 aaKnown RBP eCLIP19.85■□□□□ 0.77
GSE1-213ENST00000568080 WWC3Q9ULE0 1092 aa19.85■□□□□ 0.77
GSE1-213ENST00000568080 ADAMTS7Q9UKP4 1686 aa19.84■□□□□ 0.77
GSE1-213ENST00000568080 GYS1P13807 737 aa19.84■□□□□ 0.77
GSE1-213ENST00000568080 PARP3Q9Y6F1 533 aa19.84■□□□□ 0.77
GSE1-213ENST00000568080 CICQ96RK0 1608 aaPredicted RBP19.84■□□□□ 0.77
GSE1-213ENST00000568080 CCDC87Q9NVE4 849 aa19.83■□□□□ 0.77
GSE1-213ENST00000568080 INTS5Q6P9B9 1019 aaKnown RBP19.82■□□□□ 0.76
GSE1-213ENST00000568080 RSPH6AQ9H0K4 717 aa19.82■□□□□ 0.76
GSE1-213ENST00000568080 KCPQ6ZWJ8 1503 aa19.81■□□□□ 0.76
GSE1-213ENST00000568080 ZPR1O75312 459 aa19.81■□□□□ 0.76
GSE1-213ENST00000568080 IL17REQ8NFR9 667 aa19.81■□□□□ 0.76
GSE1-213ENST00000568080 PHACTR3Q96KR7 559 aa19.81■□□□□ 0.76
GSE1-213ENST00000568080 SRP68Q9UHB9 627 aaKnown RBP19.81■□□□□ 0.76
GSE1-213ENST00000568080 USP42Q9H9J4 1324 aaKnown RBP19.8■□□□□ 0.76
GSE1-213ENST00000568080 CYP19A1P11511 503 aaPredicted RBP19.8■□□□□ 0.76
GSE1-213ENST00000568080 VSIG10Q8N0Z9 540 aa19.8■□□□□ 0.76
GSE1-213ENST00000568080 RTF1Q92541 710 aaKnown RBP19.79■□□□□ 0.76
GSE1-213ENST00000568080 UBR2Q8IWV8 1755 aa19.79■□□□□ 0.76
GSE1-213ENST00000568080 FCHSD2O94868 740 aa19.78■□□□□ 0.76
GSE1-213ENST00000568080 STARD3NLO95772 234 aa19.78■□□□□ 0.76
GSE1-213ENST00000568080 FKBP8Q14318 412 aa19.78■□□□□ 0.76
GSE1-213ENST00000568080 SOS1Q07889 1333 aaPredicted RBP19.77■□□□□ 0.76
GSE1-213ENST00000568080 KIF13BQ9NQT8 1826 aa19.77■□□□□ 0.76
GSE1-213ENST00000568080 NEFMP07197 916 aa19.77■□□□□ 0.76
GSE1-213ENST00000568080 TGFB2P61812 414 aa19.77■□□□□ 0.76
GSE1-213ENST00000568080 ZNF790Q6PG37 636 aa19.77■□□□□ 0.76
GSE1-213ENST00000568080 ZBTB1Q9Y2K1 713 aa19.77■□□□□ 0.76
GSE1-213ENST00000568080 N4BP2Q86UW6 1770 aaPredicted RBP19.77■□□□□ 0.76
GSE1-213ENST00000568080 SIPA1L3O60292 1781 aaPredicted RBP19.76■□□□□ 0.75
GSE1-213ENST00000568080 BTBD11A6QL63 1104 aa19.76■□□□□ 0.75
GSE1-213ENST00000568080 CANXP27824 592 aaKnown RBP19.76■□□□□ 0.75
GSE1-213ENST00000568080 USPL1Q5W0Q7 1092 aa19.76■□□□□ 0.75
GSE1-213ENST00000568080 C10orf71Q711Q0 1435 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms