RNA–Protein interactions for RNA: ENST00000567935.1

COMMD4-221, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-221ENST00000567935 ADCY9O60503 1353 aa18.93■□□□□ 0.62
COMMD4-221ENST00000567935 NHSQ6T4R5 1651 aa18.92■□□□□ 0.62
COMMD4-221ENST00000567935 HMOX1P09601 288 aa18.9■□□□□ 0.62
COMMD4-221ENST00000567935 HSP90AB2PQ58FF8 381 aa18.9■□□□□ 0.62
COMMD4-221ENST00000567935 ACSBG1Q96GR2 724 aa18.9■□□□□ 0.62
COMMD4-221ENST00000567935 CDCA7Q9BWT1 371 aaPredicted RBP18.9■□□□□ 0.62
COMMD4-221ENST00000567935 LRRC4BQ9NT99 713 aa18.9■□□□□ 0.62
COMMD4-221ENST00000567935 SLIT3O75094 1523 aa18.9■□□□□ 0.62
COMMD4-221ENST00000567935 NFAT5O94916 1531 aa18.9■□□□□ 0.62
COMMD4-221ENST00000567935 COL18A1P39060 1754 aa18.89■□□□□ 0.61
COMMD4-221ENST00000567935 COL13A1Q5TAT6 717 aaPredicted RBP18.89■□□□□ 0.61
COMMD4-221ENST00000567935 SLC16A10Q8TF71 515 aa18.89■□□□□ 0.61
COMMD4-221ENST00000567935 WDR17Q8IZU2 1322 aa18.89■□□□□ 0.61
COMMD4-221ENST00000567935 KDRP35968 1356 aa18.89■□□□□ 0.61
COMMD4-221ENST00000567935 AKT1S1Q96B36 256 aa18.88■□□□□ 0.61
COMMD4-221ENST00000567935 AXIN2Q9Y2T1 843 aa18.88■□□□□ 0.61
COMMD4-221ENST00000567935 PNPLA7Q6ZV29 1317 aa18.88■□□□□ 0.61
COMMD4-221ENST00000567935 HOXC9P31274 260 aa18.87■□□□□ 0.61
COMMD4-221ENST00000567935 SULT6B1Q6IMI4 303 aa18.87■□□□□ 0.61
COMMD4-221ENST00000567935 IGSF1Q8N6C5 1336 aa18.87■□□□□ 0.61
COMMD4-221ENST00000567935 DNAJC5GQ8N7S2 189 aa18.87■□□□□ 0.61
COMMD4-221ENST00000567935 TNS2Q63HR2 1409 aa18.86■□□□□ 0.61
COMMD4-221ENST00000567935 EXOC5O00471 708 aa18.86■□□□□ 0.61
COMMD4-221ENST00000567935 PHACTR3Q96KR7 559 aa18.86■□□□□ 0.61
COMMD4-221ENST00000567935 LTN1O94822 1766 aa18.86■□□□□ 0.61
COMMD4-221ENST00000567935 QSER1Q2KHR3 1735 aa18.86■□□□□ 0.61
COMMD4-221ENST00000567935 FANCIQ9NVI1 1328 aa18.85■□□□□ 0.61
COMMD4-221ENST00000567935 SOX12O15370 315 aa18.85■□□□□ 0.61
COMMD4-221ENST00000567935 IP6K1Q92551 441 aa18.85■□□□□ 0.61
COMMD4-221ENST00000567935 ZNF428Q96B54 188 aa18.85■□□□□ 0.61
COMMD4-221ENST00000567935 BTAF1O14981 1849 aa18.85■□□□□ 0.61
COMMD4-221ENST00000567935 KIF3CO14782 793 aa18.84■□□□□ 0.61
COMMD4-221ENST00000567935 APLP1P51693 650 aa18.84■□□□□ 0.61
COMMD4-221ENST00000567935 CCDC136Q96JN2 1154 aa18.84■□□□□ 0.61
COMMD4-221ENST00000567935 DLG5Q8TDM6 1919 aa18.84■□□□□ 0.61
COMMD4-221ENST00000567935 GNAI1P63096 354 aa18.83■□□□□ 0.6
COMMD4-221ENST00000567935 PDE3AQ14432 1141 aa18.83■□□□□ 0.6
COMMD4-221ENST00000567935 IFT57Q9NWB7 429 aa18.83■□□□□ 0.6
COMMD4-221ENST00000567935 TUBGCP6Q96RT7 1819 aa18.83■□□□□ 0.6
COMMD4-221ENST00000567935 RARSP54136 660 aaKnown RBP18.82■□□□□ 0.6
COMMD4-221ENST00000567935 CARD10Q9BWT7 1032 aa18.82■□□□□ 0.6
COMMD4-221ENST00000567935 EXOC6Q8TAG9 804 aa18.81■□□□□ 0.6
COMMD4-221ENST00000567935 PRELPP51888 382 aa18.8■□□□□ 0.6
COMMD4-221ENST00000567935 B4GALNT3Q6L9W6 998 aa18.8■□□□□ 0.6
COMMD4-221ENST00000567935 AEBP1Q8IUX7 1158 aa18.8■□□□□ 0.6
COMMD4-221ENST00000567935 GAS2L2Q8NHY3 880 aa18.8■□□□□ 0.6
COMMD4-221ENST00000567935 EYA1Q99502 592 aa18.8■□□□□ 0.6
COMMD4-221ENST00000567935 RGPD5Q99666 1765 aa18.79■□□□□ 0.6
COMMD4-221ENST00000567935 PLIN1O60240 522 aa18.79■□□□□ 0.6
COMMD4-221ENST00000567935 CSB-PGBD3P0DP91 1061 aa18.79■□□□□ 0.6
COMMD4-221ENST00000567935 MS4A1P11836 297 aa18.79■□□□□ 0.6
COMMD4-221ENST00000567935 AAMPQ13685 434 aa18.79■□□□□ 0.6
COMMD4-221ENST00000567935 ABCC6O95255 1503 aa18.79■□□□□ 0.6
COMMD4-221ENST00000567935 HTATSF1O43719 755 aaKnown RBP18.78■□□□□ 0.6
COMMD4-221ENST00000567935 ZNF853P0CG23 659 aa18.78■□□□□ 0.6
COMMD4-221ENST00000567935 ARHGEF25Q86VW2 580 aa18.78■□□□□ 0.6
COMMD4-221ENST00000567935 TNS4Q8IZW8 715 aa18.78■□□□□ 0.6
COMMD4-221ENST00000567935 CRBNQ96SW2 442 aa18.78■□□□□ 0.6
COMMD4-221ENST00000567935 BCAR3O75815 825 aa18.77■□□□□ 0.6
COMMD4-221ENST00000567935 KCNQ4P56696 695 aa18.77■□□□□ 0.6
COMMD4-221ENST00000567935 EXOSC9Q06265 439 aaKnown RBP18.77■□□□□ 0.6
COMMD4-221ENST00000567935 CFAP44Q96MT7 982 aa18.77■□□□□ 0.6
COMMD4-221ENST00000567935 TFCP2L1Q9NZI6 479 aa18.77■□□□□ 0.6
COMMD4-221ENST00000567935 CANXP27824 592 aaKnown RBP18.76■□□□□ 0.59
COMMD4-221ENST00000567935 ALDH1L2Q3SY69 923 aa18.76■□□□□ 0.59
COMMD4-221ENST00000567935 TSR2Q969E8 191 aaKnown RBP18.76■□□□□ 0.59
COMMD4-221ENST00000567935 SLC27A3Q5K4L6 730 aa18.74■□□□□ 0.59
COMMD4-221ENST00000567935 NCAPD2Q15021 1401 aa18.74■□□□□ 0.59
COMMD4-221ENST00000567935 BRPF1P55201 1214 aaPredicted RBP18.73■□□□□ 0.59
COMMD4-221ENST00000567935 MSL1Q68DK7 614 aa18.73■□□□□ 0.59
COMMD4-221ENST00000567935 RTF1Q92541 710 aaKnown RBP18.73■□□□□ 0.59
COMMD4-221ENST00000567935 KIF16BQ96L93 1317 aa18.73■□□□□ 0.59
COMMD4-221ENST00000567935 SLC34A2O95436 690 aa18.72■□□□□ 0.59
COMMD4-221ENST00000567935 WDR90Q96KV7 1748 aa18.71■□□□□ 0.59
COMMD4-221ENST00000567935 PLEKHG2Q9H7P9 1386 aa18.71■□□□□ 0.59
COMMD4-221ENST00000567935 HTRA3P83110 453 aa18.71■□□□□ 0.59
COMMD4-221ENST00000567935 C20orf194Q5TEA3 1177 aa18.71■□□□□ 0.59
COMMD4-221ENST00000567935 WWC3Q9ULE0 1092 aa18.71■□□□□ 0.59
COMMD4-221ENST00000567935 IPO8O15397 1037 aaKnown RBP18.7■□□□□ 0.58
COMMD4-221ENST00000567935 MTHFSDQ2M296 383 aaKnown RBP18.7■□□□□ 0.58
COMMD4-221ENST00000567935 ZKSCAN2Q63HK3 967 aa18.7■□□□□ 0.58
COMMD4-221ENST00000567935 JMYQ8N9B5 988 aa18.7■□□□□ 0.58
COMMD4-221ENST00000567935 SMC4Q9NTJ3 1288 aa18.7■□□□□ 0.58
COMMD4-221ENST00000567935 MSH5O43196 834 aa18.69■□□□□ 0.58
COMMD4-221ENST00000567935 TOMM70O94826 608 aa18.69■□□□□ 0.58
COMMD4-221ENST00000567935 COL23A1Q86Y22 540 aaPredicted RBP18.69■□□□□ 0.58
COMMD4-221ENST00000567935 KLRG1Q96E93 195 aa18.69■□□□□ 0.58
COMMD4-221ENST00000567935 MBIPQ9NS73 344 aa18.69■□□□□ 0.58
COMMD4-221ENST00000567935 BABAM1Q9NWV8 329 aa18.69■□□□□ 0.58
COMMD4-221ENST00000567935 LAS1LQ9Y4W2 734 aaKnown RBP18.69■□□□□ 0.58
COMMD4-221ENST00000567935 CD2APQ9Y5K6 639 aa18.69■□□□□ 0.58
COMMD4-221ENST00000567935 CHL1O00533 1208 aa18.68■□□□□ 0.58
COMMD4-221ENST00000567935 FRAT1Q92837 279 aaPredicted RBP18.68■□□□□ 0.58
COMMD4-221ENST00000567935 LTV1Q96GA3 475 aaPredicted RBP18.68■□□□□ 0.58
COMMD4-221ENST00000567935 THUMPD2Q9BTF0 503 aaKnown RBP18.68■□□□□ 0.58
COMMD4-221ENST00000567935 KAT6BQ8WYB5 2073 aa18.68■□□□□ 0.58
COMMD4-221ENST00000567935 FAM208AQ9UK61 1670 aaKnown RBP18.67■□□□□ 0.58
COMMD4-221ENST00000567935 GNAT3A8MTJ3 354 aa18.67■□□□□ 0.58
COMMD4-221ENST00000567935 SSH1Q8WYL5 1049 aa18.67■□□□□ 0.58
COMMD4-221ENST00000567935 AMOTQ4VCS5 1084 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms