RNA–Protein interactions for RNA: ENST00000567887.5

MACF1-232, Transcript of microtubule-actin crosslinking factor 1, humanhuman

APPRIS P5 TSL 5 BASIC

Gene MACF1, Length 24,319 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-232ENST00000567887 CCDC158Q5M9N0 1113 aa6.93□□□□□ -1.3
MACF1-232ENST00000567887 SIRT1Q96EB6 747 aa6.93□□□□□ -1.3
MACF1-232ENST00000567887 KIF20AO95235 890 aa6.93□□□□□ -1.3
MACF1-232ENST00000567887 DDX58O95786 925 aaKnown RBP6.93□□□□□ -1.3
MACF1-232ENST00000567887 TTC39AQ5SRH9 613 aa6.93□□□□□ -1.3
MACF1-232ENST00000567887 CCDC121Q6ZUS5 278 aa6.92□□□□□ -1.3
MACF1-232ENST00000567887 FKBP4Q02790 459 aaKnown RBP eCLIP6.92□□□□□ -1.3
MACF1-232ENST00000567887 XPCQ01831 940 aaPredicted RBP6.92□□□□□ -1.3
MACF1-232ENST00000567887 FSD1Q9BTV5 496 aa6.92□□□□□ -1.3
MACF1-232ENST00000567887 NUP88Q99567 741 aaPredicted RBP6.92□□□□□ -1.3
MACF1-232ENST00000567887 LRSAM1Q6UWE0 723 aa6.92□□□□□ -1.3
MACF1-232ENST00000567887 CCDC144CPQ8IYA2 1237 aa6.92□□□□□ -1.3
MACF1-232ENST00000567887 ALS2CR12Q96Q35 445 aa6.92□□□□□ -1.3
MACF1-232ENST00000567887 UBA5Q9GZZ9 404 aa6.92□□□□□ -1.3
MACF1-232ENST00000567887 RIPK4P57078 832 aa6.92□□□□□ -1.3
MACF1-232ENST00000567887 GSTA5Q7RTV2 222 aa6.92□□□□□ -1.3
MACF1-232ENST00000567887 RABGAP1Q9Y3P9 1069 aa6.92□□□□□ -1.3
MACF1-232ENST00000567887 PPP1R12BO60237 982 aaPredicted RBP6.92□□□□□ -1.3
MACF1-232ENST00000567887 USO1O60763 962 aaKnown RBP6.92□□□□□ -1.3
MACF1-232ENST00000567887 CASQ2O14958 399 aaPredicted RBP6.92□□□□□ -1.3
MACF1-232ENST00000567887 DIAPH1O60610 1272 aaKnown RBP6.92□□□□□ -1.3
MACF1-232ENST00000567887 FKBP5Q13451 457 aaPredicted RBP6.92□□□□□ -1.3
MACF1-232ENST00000567887 VPS52Q8N1B4 723 aa6.92□□□□□ -1.3
MACF1-232ENST00000567887 TACC1O75410 805 aa6.92□□□□□ -1.3
MACF1-232ENST00000567887 NAA16Q6N069 864 aaPredicted RBP6.92□□□□□ -1.3
MACF1-232ENST00000567887 SURF6O75683 361 aaKnown RBP6.92□□□□□ -1.3
MACF1-232ENST00000567887 SLC4A1P02730 911 aa6.92□□□□□ -1.3
MACF1-232ENST00000567887 AKNAD1Q5T1N1 836 aa6.92□□□□□ -1.3
MACF1-232ENST00000567887 MYO1BO43795 1136 aa6.92□□□□□ -1.3
MACF1-232ENST00000567887 ZEB2O60315 1214 aa6.92□□□□□ -1.3
MACF1-232ENST00000567887 JMYQ8N9B5 988 aa6.92□□□□□ -1.3
MACF1-232ENST00000567887 STAC3Q96MF2 364 aa6.92□□□□□ -1.3
MACF1-232ENST00000567887 CNNM1Q9NRU3 951 aa6.92□□□□□ -1.3
MACF1-232ENST00000567887 GBP3Q9H0R5 595 aa6.91□□□□□ -1.3
MACF1-232ENST00000567887 TMEM110-MUSTN1A8MSY1 372 aa6.91□□□□□ -1.3
MACF1-232ENST00000567887 VPS36Q86VN1 386 aa6.91□□□□□ -1.3
MACF1-232ENST00000567887 SPATA32Q96LK8 384 aa6.91□□□□□ -1.3
MACF1-232ENST00000567887 PPP1R12CQ9BZL4 782 aa6.91□□□□□ -1.3
MACF1-232ENST00000567887 BAG1Q99933 345 aaPredicted RBP6.91□□□□□ -1.3
MACF1-232ENST00000567887 FKBP15Q5T1M5 1219 aa6.91□□□□□ -1.3
MACF1-232ENST00000567887 PANK3Q9H999 370 aa6.91□□□□□ -1.3
MACF1-232ENST00000567887 PPME1Q9Y570 386 aa6.91□□□□□ -1.3
MACF1-232ENST00000567887 PPP2R5CQ13362 524 aa6.91□□□□□ -1.3
MACF1-232ENST00000567887 JADE2Q9NQC1 790 aa6.91□□□□□ -1.3
MACF1-232ENST00000567887 CEP85LQ5SZL2 805 aa6.91□□□□□ -1.3
MACF1-232ENST00000567887 SMIM23A6NLE4 172 aa6.91□□□□□ -1.3
MACF1-232ENST00000567887 CXorf38Q8TB03 319 aa6.91□□□□□ -1.3
MACF1-232ENST00000567887 CNTROBQ8N137 903 aa6.9□□□□□ -1.3
MACF1-232ENST00000567887 USH1CQ9Y6N9 552 aa6.9□□□□□ -1.3
MACF1-232ENST00000567887 SNX16P57768 344 aa6.9□□□□□ -1.3
MACF1-232ENST00000567887 TNIP1Q15025 636 aa6.9□□□□□ -1.3
MACF1-232ENST00000567887 PPP4R3AQ6IN85 833 aa6.9□□□□□ -1.3
MACF1-232ENST00000567887 CEP112Q8N8E3 955 aa6.9□□□□□ -1.3
MACF1-232ENST00000567887 PANK1Q8TE04 598 aa6.9□□□□□ -1.3
MACF1-232ENST00000567887 GOLIM4O00461 696 aa6.9□□□□□ -1.3
MACF1-232ENST00000567887 SETDB1Q15047 1291 aa6.9□□□□□ -1.3
MACF1-232ENST00000567887 FERMT1Q9BQL6 677 aa6.9□□□□□ -1.3
MACF1-232ENST00000567887 KTN1Q86UP2 1357 aaKnown RBP6.9□□□□□ -1.3
MACF1-232ENST00000567887 SF3A3Q12874 501 aaKnown RBP eCLIP6.9□□□□□ -1.3
MACF1-232ENST00000567887 NBPF6Q5VWK0 638 aa6.9□□□□□ -1.3
MACF1-232ENST00000567887 DPH6Q7L8W6 267 aa6.9□□□□□ -1.3
MACF1-232ENST00000567887 NBPF4Q96M43 638 aa6.9□□□□□ -1.3
MACF1-232ENST00000567887 ZSCAN12O43309 604 aa6.9□□□□□ -1.3
MACF1-232ENST00000567887 CYP46A1Q9Y6A2 500 aa6.9□□□□□ -1.3
MACF1-232ENST00000567887 PLCB3Q01970 1234 aa6.9□□□□□ -1.3
MACF1-232ENST00000567887 SMARCC1Q92922 1105 aaPredicted RBP6.9□□□□□ -1.3
MACF1-232ENST00000567887 IGSF3O75054 1194 aa6.9□□□□□ -1.3
MACF1-232ENST00000567887 VPS41P49754 854 aa6.9□□□□□ -1.3
MACF1-232ENST00000567887 MRRFQ96E11 262 aaKnown RBP6.9□□□□□ -1.3
MACF1-232ENST00000567887 GRPEL1Q9HAV7 217 aa6.9□□□□□ -1.3
MACF1-232ENST00000567887 CCDC57Q2TAC2 916 aa6.9□□□□□ -1.3
MACF1-232ENST00000567887 PDCP20941 246 aa6.9□□□□□ -1.31
MACF1-232ENST00000567887 TRIM22Q8IYM9 498 aa6.9□□□□□ -1.31
MACF1-232ENST00000567887 TSG101Q99816 390 aa6.9□□□□□ -1.31
MACF1-232ENST00000567887 SYNCQ9H7C4 482 aa6.9□□□□□ -1.31
MACF1-232ENST00000567887 VAT1LQ9HCJ6 419 aa6.9□□□□□ -1.31
MACF1-232ENST00000567887 PPFIA2O75334 1257 aa6.9□□□□□ -1.31
MACF1-232ENST00000567887 CCDC83Q8IWF9 413 aa6.9□□□□□ -1.31
MACF1-232ENST00000567887 TTLL12Q14166 644 aaPredicted RBP6.89□□□□□ -1.31
MACF1-232ENST00000567887 MAK16Q9BXY0 300 aaKnown RBP6.89□□□□□ -1.31
MACF1-232ENST00000567887 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.89□□□□□ -1.31
MACF1-232ENST00000567887 CFAP157Q5JU67 520 aa6.89□□□□□ -1.31
MACF1-232ENST00000567887 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.89□□□□□ -1.315e-7■■■□□ 17.9
MACF1-232ENST00000567887 PPANQ9NQ55 473 aaKnown RBP6.89□□□□□ -1.31
MACF1-232ENST00000567887 PDRG1Q9NUG6 133 aa6.89□□□□□ -1.31
MACF1-232ENST00000567887 CPLX4Q7Z7G2 160 aa6.89□□□□□ -1.31
MACF1-232ENST00000567887 SYCP3Q8IZU3 236 aa6.89□□□□□ -1.31
MACF1-232ENST00000567887 FGFR1OPO95684 399 aaKnown RBP6.89□□□□□ -1.31
MACF1-232ENST00000567887 EID1Q9Y6B2 187 aa6.89□□□□□ -1.31
MACF1-232ENST00000567887 DNAJC21Q5F1R6 531 aaKnown RBP6.89□□□□□ -1.31
MACF1-232ENST00000567887 SMIM24O75264 130 aa6.89□□□□□ -1.31
MACF1-232ENST00000567887 OPA1O60313 960 aa6.89□□□□□ -1.31
MACF1-232ENST00000567887 CCDC89Q8N998 374 aa6.89□□□□□ -1.31
MACF1-232ENST00000567887 RASA3Q14644 834 aa6.89□□□□□ -1.31
MACF1-232ENST00000567887 TRIM55Q9BYV6 548 aa6.89□□□□□ -1.31
MACF1-232ENST00000567887 CEP128Q6ZU80 1094 aa6.89□□□□□ -1.31
MACF1-232ENST00000567887 CCDC82Q8N4S0 544 aa6.89□□□□□ -1.31
MACF1-232ENST00000567887 NUF2Q9BZD4 464 aa6.89□□□□□ -1.31
MACF1-232ENST00000567887 NUTM2GQ5VZR2 741 aa6.89□□□□□ -1.31
MACF1-232ENST00000567887 ACTN2P35609 894 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms