RNA–Protein interactions for RNA: ENST00000567880.5

TCF4-236, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-236ENST00000567880 RRP1P56182 461 aaKnown RBP13.49□□□□□ -0.25
TCF4-236ENST00000567880 TEFQ10587 303 aa13.49□□□□□ -0.25
TCF4-236ENST00000567880 UNC5CLQ8IV45 518 aa13.49□□□□□ -0.25
TCF4-236ENST00000567880 SPATA31A1Q5TZJ5 1347 aa13.48□□□□□ -0.25
TCF4-236ENST00000567880 BCAR3O75815 825 aa13.48□□□□□ -0.25
TCF4-236ENST00000567880 TAF7Q15545 349 aaPredicted RBP13.48□□□□□ -0.25
TCF4-236ENST00000567880 DDX54Q8TDD1 881 aaKnown RBP13.48□□□□□ -0.25
TCF4-236ENST00000567880 BCL2L13Q9BXK5 485 aa13.48□□□□□ -0.25
TCF4-236ENST00000567880 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.48□□□□□ -0.25
TCF4-236ENST00000567880 BCL9LQ86UU0 1499 aa13.48□□□□□ -0.25
TCF4-236ENST00000567880 KDM3BQ7LBC6 1761 aa13.47□□□□□ -0.25
TCF4-236ENST00000567880 RNF123Q5XPI4 1314 aa13.47□□□□□ -0.25
TCF4-236ENST00000567880 PLIN1O60240 522 aa13.47□□□□□ -0.25
TCF4-236ENST00000567880 TSPYL6Q8N831 410 aa13.47□□□□□ -0.25
TCF4-236ENST00000567880 KDM6AO15550 1401 aaPredicted RBP13.47□□□□□ -0.25
TCF4-236ENST00000567880 SPATA31A5Q5VU36 1347 aa13.47□□□□□ -0.25
TCF4-236ENST00000567880 SPATA31A7Q8IWB4 1347 aa13.47□□□□□ -0.25
TCF4-236ENST00000567880 KRT24Q2M2I5 525 aa13.47□□□□□ -0.25
TCF4-236ENST00000567880 USP21Q9UK80 565 aa13.47□□□□□ -0.25
TCF4-236ENST00000567880 DISP2A7MBM2 1401 aa13.46□□□□□ -0.25
TCF4-236ENST00000567880 CT47B1P0C2W7 299 aaPredicted RBP13.46□□□□□ -0.25
TCF4-236ENST00000567880 RARSP54136 660 aaKnown RBP13.46□□□□□ -0.25
TCF4-236ENST00000567880 FNBP4Q8N3X1 1017 aaPredicted RBP13.46□□□□□ -0.25
TCF4-236ENST00000567880 C8orf58Q8NAV2 365 aa13.46□□□□□ -0.25
TCF4-236ENST00000567880 HSP90AB1P08238 724 aaKnown RBP13.45□□□□□ -0.26
TCF4-236ENST00000567880 TWISTNBQ3B726 338 aaPredicted RBP13.45□□□□□ -0.26
TCF4-236ENST00000567880 DCAF5Q96JK2 942 aa13.45□□□□□ -0.26
TCF4-236ENST00000567880 BTBD11A6QL63 1104 aa13.45□□□□□ -0.26
TCF4-236ENST00000567880 THRAP3Q9Y2W1 955 aaKnown RBP13.45□□□□□ -0.26
TCF4-236ENST00000567880 AFF2P51816 1311 aa13.44□□□□□ -0.26
TCF4-236ENST00000567880 SLC4A2P04920 1241 aa13.44□□□□□ -0.26
TCF4-236ENST00000567880 SMC4Q9NTJ3 1288 aa13.44□□□□□ -0.26
TCF4-236ENST00000567880 EXOC5O00471 708 aa13.43□□□□□ -0.26
TCF4-236ENST00000567880 VAMP4O75379 141 aa13.43□□□□□ -0.26
TCF4-236ENST00000567880 CANXP27824 592 aaKnown RBP13.43□□□□□ -0.26
TCF4-236ENST00000567880 VPS72Q15906 364 aa13.43□□□□□ -0.26
TCF4-236ENST00000567880 IFNLR1Q8IU57 520 aaPredicted RBP13.43□□□□□ -0.26
TCF4-236ENST00000567880 FRAT1Q92837 279 aaPredicted RBP13.43□□□□□ -0.26
TCF4-236ENST00000567880 SLC52A2Q9HAB3 445 aa13.43□□□□□ -0.26
TCF4-236ENST00000567880 TOGARAM1Q9Y4F4 1720 aa13.43□□□□□ -0.26
TCF4-236ENST00000567880 ITGB4P16144 1822 aa13.43□□□□□ -0.26
TCF4-236ENST00000567880 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.43□□□□□ -0.26
TCF4-236ENST00000567880 NFATC2IPQ8NCF5 419 aa13.43□□□□□ -0.26
TCF4-236ENST00000567880 SSH1Q8WYL5 1049 aa13.43□□□□□ -0.26
TCF4-236ENST00000567880 CDCA7Q9BWT1 371 aaPredicted RBP13.43□□□□□ -0.26
TCF4-236ENST00000567880 TNS2Q63HR2 1409 aa13.42□□□□□ -0.26
TCF4-236ENST00000567880 TCERG1O14776 1098 aaKnown RBP13.42□□□□□ -0.26
TCF4-236ENST00000567880 FAM98CQ17RN3 349 aaKnown RBP13.42□□□□□ -0.26
TCF4-236ENST00000567880 BABAM1Q9NWV8 329 aa13.42□□□□□ -0.26
TCF4-236ENST00000567880 MRC1P22897 1456 aa13.41□□□□□ -0.26
TCF4-236ENST00000567880 A0A0G2JS52 829 aa13.41□□□□□ -0.26
TCF4-236ENST00000567880 KCNQ3O43525 872 aa13.41□□□□□ -0.26
TCF4-236ENST00000567880 CABP4P57796 275 aa13.41□□□□□ -0.26
TCF4-236ENST00000567880 DDB1Q16531 1140 aa13.41□□□□□ -0.26
TCF4-236ENST00000567880 BARGINQ6ZT62 677 aa13.41□□□□□ -0.26
TCF4-236ENST00000567880 CACNA1FO60840 1977 aa13.4□□□□□ -0.26
TCF4-236ENST00000567880 SLC39A6Q13433 755 aa13.4□□□□□ -0.26
TCF4-236ENST00000567880 NKX1-1Q15270 411 aaPredicted RBP13.4□□□□□ -0.26
TCF4-236ENST00000567880 ZNF428Q96B54 188 aa13.4□□□□□ -0.26
TCF4-236ENST00000567880 DOT1LQ8TEK3 1739 aa13.39□□□□□ -0.27
TCF4-236ENST00000567880 ALDH1L2Q3SY69 923 aa13.39□□□□□ -0.27
TCF4-236ENST00000567880 C20orf194Q5TEA3 1177 aa13.39□□□□□ -0.27
TCF4-236ENST00000567880 GLI3P10071 1580 aa13.39□□□□□ -0.27
TCF4-236ENST00000567880 EIF4A1P60842 406 aaKnown RBP13.39□□□□□ -0.27
TCF4-236ENST00000567880 ERVV-2B6SEH9 535 aa13.38□□□□□ -0.27
TCF4-236ENST00000567880 NECTIN2Q92692 538 aa13.38□□□□□ -0.27
TCF4-236ENST00000567880 ZNF790Q6PG37 636 aa13.37□□□□□ -0.27
TCF4-236ENST00000567880 GJD4Q96KN9 370 aaPredicted RBP13.37□□□□□ -0.27
TCF4-236ENST00000567880 C5P01031 1676 aa13.37□□□□□ -0.27
TCF4-236ENST00000567880 TTC5Q8N0Z6 440 aa13.37□□□□□ -0.27
TCF4-236ENST00000567880 PIAS4Q8N2W9 510 aaPredicted RBP13.37□□□□□ -0.27
TCF4-236ENST00000567880 FBXO41Q8TF61 875 aa13.37□□□□□ -0.27
TCF4-236ENST00000567880 TRPC5Q9UL62 973 aaPredicted RBP13.37□□□□□ -0.27
TCF4-236ENST00000567880 NOB1Q9ULX3 412 aaKnown RBP13.37□□□□□ -0.27
TCF4-236ENST00000567880 KIF16BQ96L93 1317 aa13.37□□□□□ -0.27
TCF4-236ENST00000567880 THSD7AQ9UPZ6 1657 aa13.36□□□□□ -0.27
TCF4-236ENST00000567880 ZKSCAN2Q63HK3 967 aa13.36□□□□□ -0.27
TCF4-236ENST00000567880 MRPL50Q8N5N7 158 aaKnown RBP13.36□□□□□ -0.27
TCF4-236ENST00000567880 SPRYD3Q8NCJ5 442 aa13.36□□□□□ -0.27
TCF4-236ENST00000567880 CLUAP1Q96AJ1 413 aa13.36□□□□□ -0.27
TCF4-236ENST00000567880 CRBNQ96SW2 442 aa13.36□□□□□ -0.27
TCF4-236ENST00000567880 TMOD3Q9NYL9 352 aa13.36□□□□□ -0.27
TCF4-236ENST00000567880 TNNQ9UQP3 1299 aa13.36□□□□□ -0.27
TCF4-236ENST00000567880 ATRNO75882 1429 aa13.36□□□□□ -0.27
TCF4-236ENST00000567880 PAPPAQ13219 1627 aa13.36□□□□□ -0.27
TCF4-236ENST00000567880 UBR2Q8IWV8 1755 aa13.35□□□□□ -0.27
TCF4-236ENST00000567880 EIF2S2P20042 333 aaKnown RBP13.35□□□□□ -0.27
TCF4-236ENST00000567880 VASPP50552 380 aaPredicted RBP13.35□□□□□ -0.27
TCF4-236ENST00000567880 MARCH10Q8NA82 808 aaPredicted RBP13.35□□□□□ -0.27
TCF4-236ENST00000567880 EXOC6Q8TAG9 804 aa13.35□□□□□ -0.27
TCF4-236ENST00000567880 SYTL4Q96C24 671 aaPredicted RBP13.35□□□□□ -0.27
TCF4-236ENST00000567880 HDGFL1Q5TGJ6 251 aa13.35□□□□□ -0.27
TCF4-236ENST00000567880 PANK1Q8TE04 598 aa13.35□□□□□ -0.27
TCF4-236ENST00000567880 QTRT2Q9H974 415 aaKnown RBP13.35□□□□□ -0.27
TCF4-236ENST00000567880 CCDC30Q5VVM6 783 aa13.34□□□□□ -0.27
TCF4-236ENST00000567880 FTSJ3Q8IY81 847 aaKnown RBP13.34□□□□□ -0.27
TCF4-236ENST00000567880 STK31Q9BXU1 1019 aa13.34□□□□□ -0.27
TCF4-236ENST00000567880 SOS1Q07889 1333 aaPredicted RBP13.33□□□□□ -0.28
TCF4-236ENST00000567880 PRAMEF22A3QJZ6 481 aa13.33□□□□□ -0.28
TCF4-236ENST00000567880 IPO8O15397 1037 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms