RNA–Protein interactions for RNA: ENST00000567648.1

VAC14-209, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 3

Gene VAC14, Length 702 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-209ENST00000567648 ZNF831Q5JPB2 1677 aa23.33■■□□□ 1.33
VAC14-209ENST00000567648 POLD1P28340 1107 aa23.33■■□□□ 1.33
VAC14-209ENST00000567648 SMARCC1Q92922 1105 aaPredicted RBP23.33■■□□□ 1.33
VAC14-209ENST00000567648 SULT6B1Q6IMI4 303 aa23.32■■□□□ 1.32
VAC14-209ENST00000567648 ZNF530Q6P9A1 599 aaPredicted RBP23.32■■□□□ 1.32
VAC14-209ENST00000567648 COL3A1P02461 1466 aaPredicted RBP23.31■■□□□ 1.32
VAC14-209ENST00000567648 CC2D1BQ5T0F9 858 aaKnown RBP23.31■■□□□ 1.32
VAC14-209ENST00000567648 PLEKHG2Q9H7P9 1386 aa23.3■■□□□ 1.32
VAC14-209ENST00000567648 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.3■■□□□ 1.32
VAC14-209ENST00000567648 AK7Q96M32 723 aa23.3■■□□□ 1.32
VAC14-209ENST00000567648 YBX3P16989 372 aaKnown RBP eCLIP23.29■■□□□ 1.32
VAC14-209ENST00000567648 MTHFSP49914 203 aa23.29■■□□□ 1.32
VAC14-209ENST00000567648 CNGB1Q14028 1251 aaPredicted RBP23.29■■□□□ 1.32
VAC14-209ENST00000567648 KIAA1551Q9HCM1 1747 aa23.29■■□□□ 1.32
VAC14-209ENST00000567648 DCAF8L1A6NGE4 600 aa23.28■■□□□ 1.32
VAC14-209ENST00000567648 ATP6V1AP38606 617 aa23.28■■□□□ 1.32
VAC14-209ENST00000567648 PELP1Q8IZL8 1130 aaKnown RBP23.27■■□□□ 1.32
VAC14-209ENST00000567648 ADAMTS7Q9UKP4 1686 aa23.26■■□□□ 1.31
VAC14-209ENST00000567648 GNPATO15228 680 aa23.26■■□□□ 1.31
VAC14-209ENST00000567648 PLEKHO1Q53GL0 409 aaPredicted RBP23.26■■□□□ 1.31
VAC14-209ENST00000567648 CICQ96RK0 1608 aaPredicted RBP23.26■■□□□ 1.31
VAC14-209ENST00000567648 HMOX1P09601 288 aa23.25■■□□□ 1.31
VAC14-209ENST00000567648 GPR162Q16538 588 aa23.25■■□□□ 1.31
VAC14-209ENST00000567648 ZNF784Q8NCA9 323 aaPredicted RBP23.25■■□□□ 1.31
VAC14-209ENST00000567648 DCAF5Q96JK2 942 aa23.25■■□□□ 1.31
VAC14-209ENST00000567648 ERVV-2B6SEH9 535 aa23.23■■□□□ 1.31
VAC14-209ENST00000567648 RBM42Q9BTD8 480 aaKnown RBP23.23■■□□□ 1.31
VAC14-209ENST00000567648 WWC3Q9ULE0 1092 aa23.23■■□□□ 1.31
VAC14-209ENST00000567648 MRC1P22897 1456 aa23.23■■□□□ 1.31
VAC14-209ENST00000567648 SSFA2P28290 1259 aa23.22■■□□□ 1.31
VAC14-209ENST00000567648 N4BP2Q86UW6 1770 aaPredicted RBP23.22■■□□□ 1.31
VAC14-209ENST00000567648 KIF13BQ9NQT8 1826 aa23.22■■□□□ 1.31
VAC14-209ENST00000567648 AMOTQ4VCS5 1084 aa23.21■■□□□ 1.31
VAC14-209ENST00000567648 CABP4P57796 275 aa23.2■■□□□ 1.3
VAC14-209ENST00000567648 NFATC2IPQ8NCF5 419 aa23.2■■□□□ 1.3
VAC14-209ENST00000567648 LGR6Q9HBX8 967 aa23.2■■□□□ 1.3
VAC14-209ENST00000567648 FLAD1Q8NFF5 587 aa23.19■■□□□ 1.3
VAC14-209ENST00000567648 KCPQ6ZWJ8 1503 aa23.18■■□□□ 1.3
VAC14-209ENST00000567648 PTCD1O75127 700 aaKnown RBP23.18■■□□□ 1.3
VAC14-209ENST00000567648 HSP90AB1P08238 724 aaKnown RBP23.18■■□□□ 1.3
VAC14-209ENST00000567648 C1orf141Q5JVX7 400 aa23.18■■□□□ 1.3
VAC14-209ENST00000567648 UBR2Q8IWV8 1755 aa23.18■■□□□ 1.3
VAC14-209ENST00000567648 SIPA1L3O60292 1781 aaPredicted RBP23.17■■□□□ 1.3
VAC14-209ENST00000567648 MTHFSDQ2M296 383 aaKnown RBP23.16■■□□□ 1.3
VAC14-209ENST00000567648 NPC1L1Q9UHC9 1359 aa23.15■■□□□ 1.3
VAC14-209ENST00000567648 CNTNAP4Q9C0A0 1308 aa23.14■■□□□ 1.3
VAC14-209ENST00000567648 BRCA1P38398 1863 aaKnown RBP23.14■■□□□ 1.29
VAC14-209ENST00000567648 SLC39A6Q13433 755 aa23.14■■□□□ 1.29
VAC14-209ENST00000567648 ARHGEF1Q92888 912 aaKnown RBP23.14■■□□□ 1.29
VAC14-209ENST00000567648 DIAPH1O60610 1272 aaKnown RBP23.13■■□□□ 1.29
VAC14-209ENST00000567648 AKAP4Q5JQC9 854 aa23.13■■□□□ 1.29
VAC14-209ENST00000567648 CD2APQ9Y5K6 639 aa23.13■■□□□ 1.29
VAC14-209ENST00000567648 PXDNLA1KZ92 1463 aa23.12■■□□□ 1.29
VAC14-209ENST00000567648 RNMTO43148 476 aaKnown RBP23.12■■□□□ 1.29
VAC14-209ENST00000567648 MMP10P09238 476 aa23.12■■□□□ 1.29
VAC14-209ENST00000567648 CRKLP46109 303 aaKnown RBP23.11■■□□□ 1.29
VAC14-209ENST00000567648 SLC52A2Q9HAB3 445 aa23.11■■□□□ 1.29
VAC14-209ENST00000567648 SRP68Q9UHB9 627 aaKnown RBP23.11■■□□□ 1.29
VAC14-209ENST00000567648 RTCBQ9Y3I0 505 aaKnown RBP23.11■■□□□ 1.29
VAC14-209ENST00000567648 GYS1P13807 737 aa23.1■■□□□ 1.29
VAC14-209ENST00000567648 RPS6KA4O75676 772 aa23.09■■□□□ 1.29
VAC14-209ENST00000567648 RC3H1Q5TC82 1133 aaKnown RBP23.09■■□□□ 1.29
VAC14-209ENST00000567648 DNAJC10Q8IXB1 793 aa23.09■■□□□ 1.29
VAC14-209ENST00000567648 C10orf71Q711Q0 1435 aa23.08■■□□□ 1.29
VAC14-209ENST00000567648 TRAPPC3LQ5T215 181 aa23.08■■□□□ 1.29
VAC14-209ENST00000567648 INTS5Q6P9B9 1019 aaKnown RBP23.08■■□□□ 1.29
VAC14-209ENST00000567648 AFDNP55196 1824 aaKnown RBP23.06■■□□□ 1.28
VAC14-209ENST00000567648 U2SURPO15042 1029 aaKnown RBP23.06■■□□□ 1.28
VAC14-209ENST00000567648 FKBP8Q14318 412 aa23.04■■□□□ 1.28
VAC14-209ENST00000567648 HMGB2P26583 209 aaKnown RBP23.03■■□□□ 1.28
VAC14-209ENST00000567648 DDR1Q08345 913 aa23.03■■□□□ 1.28
VAC14-209ENST00000567648 PHACTR3Q96KR7 559 aa23.03■■□□□ 1.28
VAC14-209ENST00000567648 USP42Q9H9J4 1324 aaKnown RBP23.03■■□□□ 1.28
VAC14-209ENST00000567648 ADCY9O60503 1353 aa23.02■■□□□ 1.28
VAC14-209ENST00000567648 ATP10DQ9P241 1426 aa23.02■■□□□ 1.28
VAC14-209ENST00000567648 ADRA2BP18089 450 aa23.02■■□□□ 1.28
VAC14-209ENST00000567648 RFC4P35249 363 aa23.02■■□□□ 1.28
VAC14-209ENST00000567648 IL17REQ8NFR9 667 aa23.02■■□□□ 1.28
VAC14-209ENST00000567648 CYP19A1P11511 503 aaPredicted RBP23.01■■□□□ 1.27
VAC14-209ENST00000567648 ZBTB1Q9Y2K1 713 aa23.01■■□□□ 1.27
VAC14-209ENST00000567648 SOS1Q07889 1333 aaPredicted RBP23.01■■□□□ 1.27
VAC14-209ENST00000567648 A0A0G2JLW4 131 aa23■■□□□ 1.27
VAC14-209ENST00000567648 GRIN3BO60391 1043 aa23■■□□□ 1.27
VAC14-209ENST00000567648 PPP2R1AP30153 589 aa23■■□□□ 1.27
VAC14-209ENST00000567648 RSPH6AQ9H0K4 717 aa23■■□□□ 1.27
VAC14-209ENST00000567648 NRXN2Q9P2S2 1712 aa22.99■■□□□ 1.27
VAC14-209ENST00000567648 DLG5Q8TDM6 1919 aa22.98■■□□□ 1.27
VAC14-209ENST00000567648 PRKAR2BP31323 418 aa22.98■■□□□ 1.27
VAC14-209ENST00000567648 NLGN1Q8N2Q7 840 aa22.98■■□□□ 1.27
VAC14-209ENST00000567648 CCDC87Q9NVE4 849 aa22.98■■□□□ 1.27
VAC14-209ENST00000567648 ARFGEF1Q9Y6D6 1849 aa22.98■■□□□ 1.27
VAC14-209ENST00000567648 SCN7AQ01118 1682 aa22.97■■□□□ 1.27
VAC14-209ENST00000567648 KCNQ3O43525 872 aa22.97■■□□□ 1.27
VAC14-209ENST00000567648 DPEP1P16444 411 aa22.97■■□□□ 1.27
VAC14-209ENST00000567648 KCNA3P22001 575 aa22.96■■□□□ 1.27
VAC14-209ENST00000567648 USPL1Q5W0Q7 1092 aa22.96■■□□□ 1.27
VAC14-209ENST00000567648 BCL2L12Q9HB09 334 aa22.96■■□□□ 1.27
VAC14-209ENST00000567648 COL15A1P39059 1388 aa22.96■■□□□ 1.27
VAC14-209ENST00000567648 CEMIPQ8WUJ3 1361 aa22.95■■□□□ 1.26
VAC14-209ENST00000567648 C1QTNF8P60827 252 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms