RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-209ENST00000567635 COL23A1Q86Y22 540 aaPredicted RBP9.34□□□□□ -0.91
SF3B3-209ENST00000567635 FLAD1Q8NFF5 587 aa9.34□□□□□ -0.91
SF3B3-209ENST00000567635 ARXQ96QS3 562 aa9.34□□□□□ -0.91
SF3B3-209ENST00000567635 ATG3Q9NT62 314 aa9.34□□□□□ -0.91
SF3B3-209ENST00000567635 KDRP35968 1356 aa9.34□□□□□ -0.91
SF3B3-209ENST00000567635 COL24A1Q17RW2 1714 aa9.34□□□□□ -0.92
SF3B3-209ENST00000567635 SCN11AQ9UI33 1791 aa9.33□□□□□ -0.92
SF3B3-209ENST00000567635 HMOX1P09601 288 aa9.33□□□□□ -0.92
SF3B3-209ENST00000567635 SYT17Q9BSW7 474 aa9.33□□□□□ -0.92
SF3B3-209ENST00000567635 UBR3Q6ZT12 1888 aa9.32□□□□□ -0.92
SF3B3-209ENST00000567635 POLD1P28340 1107 aa9.32□□□□□ -0.92
SF3B3-209ENST00000567635 ATP6V1AP38606 617 aa9.32□□□□□ -0.92
SF3B3-209ENST00000567635 AKAP4Q5JQC9 854 aa9.32□□□□□ -0.92
SF3B3-209ENST00000567635 NFATC2IPQ8NCF5 419 aa9.32□□□□□ -0.92
SF3B3-209ENST00000567635 AK7Q96M32 723 aa9.32□□□□□ -0.92
SF3B3-209ENST00000567635 RBM42Q9BTD8 480 aaKnown RBP9.32□□□□□ -0.92
SF3B3-209ENST00000567635 FHDC1Q9C0D6 1143 aaPredicted RBP9.32□□□□□ -0.92
SF3B3-209ENST00000567635 C4BP0C0L5 1744 aa9.31□□□□□ -0.92
SF3B3-209ENST00000567635 CHD4Q14839 1912 aa9.31□□□□□ -0.92
SF3B3-209ENST00000567635 ITPK1Q13572 414 aa9.31□□□□□ -0.92
SF3B3-209ENST00000567635 LINC00116Q8NCU8 138 aa9.31□□□□□ -0.92
SF3B3-209ENST00000567635 CFAP53Q96M91 514 aa9.31□□□□□ -0.92
SF3B3-209ENST00000567635 MYH14Q7Z406 1995 aaKnown RBP9.3□□□□□ -0.92
SF3B3-209ENST00000567635 U2SURPO15042 1029 aaKnown RBP9.3□□□□□ -0.92
SF3B3-209ENST00000567635 LGR6Q9HBX8 967 aa9.3□□□□□ -0.92
SF3B3-209ENST00000567635 KDM6AO15550 1401 aaPredicted RBP9.3□□□□□ -0.92
SF3B3-209ENST00000567635 ZNF831Q5JPB2 1677 aa9.29□□□□□ -0.92
SF3B3-209ENST00000567635 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.29□□□□□ -0.92
SF3B3-209ENST00000567635 RNMTO43148 476 aaKnown RBP9.29□□□□□ -0.92
SF3B3-209ENST00000567635 PHF14O94880 888 aa9.29□□□□□ -0.92
SF3B3-209ENST00000567635 PPP2R1AP30153 589 aa9.29□□□□□ -0.92
SF3B3-209ENST00000567635 MTHFSDQ2M296 383 aaKnown RBP9.29□□□□□ -0.92
SF3B3-209ENST00000567635 RC3H1Q5TC82 1133 aaKnown RBP9.29□□□□□ -0.92
SF3B3-209ENST00000567635 NUDCQ9Y266 331 aa9.29□□□□□ -0.92
SF3B3-209ENST00000567635 MAP3K5Q99683 1374 aa9.28□□□□□ -0.92
SF3B3-209ENST00000567635 GNPATO15228 680 aa9.28□□□□□ -0.92
SF3B3-209ENST00000567635 PTCD1O75127 700 aaKnown RBP9.28□□□□□ -0.92
SF3B3-209ENST00000567635 SSFA2P28290 1259 aa9.28□□□□□ -0.92
SF3B3-209ENST00000567635 MSL1Q68DK7 614 aa9.28□□□□□ -0.92
SF3B3-209ENST00000567635 SMIM5Q71RC9 77 aa9.28□□□□□ -0.92
SF3B3-209ENST00000567635 AMIGO3Q86WK7 504 aa9.28□□□□□ -0.92
SF3B3-209ENST00000567635 SLC4A9Q96Q91 983 aa9.28□□□□□ -0.92
SF3B3-209ENST00000567635 SLC52A2Q9HAB3 445 aa9.28□□□□□ -0.92
SF3B3-209ENST00000567635 TRAPPC3LQ5T215 181 aa9.27□□□□□ -0.93
SF3B3-209ENST00000567635 KLHL34Q8N239 644 aa9.27□□□□□ -0.93
SF3B3-209ENST00000567635 RTCBQ9Y3I0 505 aaKnown RBP9.27□□□□□ -0.93
SF3B3-209ENST00000567635 COL3A1P02461 1466 aaPredicted RBP9.27□□□□□ -0.93
SF3B3-209ENST00000567635 COL5A3P25940 1745 aaPredicted RBP9.26□□□□□ -0.93
SF3B3-209ENST00000567635 GNAT3A8MTJ3 354 aa9.26□□□□□ -0.93
SF3B3-209ENST00000567635 RPS6KA4O75676 772 aa9.26□□□□□ -0.93
SF3B3-209ENST00000567635 U2AF1L5P0DN76 240 aaPredicted RBP9.26□□□□□ -0.93
SF3B3-209ENST00000567635 YY1P25490 414 aa9.26□□□□□ -0.93
SF3B3-209ENST00000567635 U2AF1Q01081 240 aaKnown RBP eCLIP9.26□□□□□ -0.93
SF3B3-209ENST00000567635 GAS2L2Q8NHY3 880 aa9.26□□□□□ -0.93
SF3B3-209ENST00000567635 FCHSD2O94868 740 aa9.25□□□□□ -0.93
SF3B3-209ENST00000567635 PRKAR2BP31323 418 aa9.25□□□□□ -0.93
SF3B3-209ENST00000567635 SLC39A6Q13433 755 aa9.25□□□□□ -0.93
SF3B3-209ENST00000567635 GPR162Q16538 588 aa9.25□□□□□ -0.93
SF3B3-209ENST00000567635 ARHGEF1Q92888 912 aaKnown RBP9.25□□□□□ -0.93
SF3B3-209ENST00000567635 PHACTR3Q96KR7 559 aa9.25□□□□□ -0.93
SF3B3-209ENST00000567635 CD2APQ9Y5K6 639 aa9.25□□□□□ -0.93
SF3B3-209ENST00000567635 CNTNAP4Q9C0A0 1308 aa9.25□□□□□ -0.93
SF3B3-209ENST00000567635 ADAMTS7Q9UKP4 1686 aa9.24□□□□□ -0.93
SF3B3-209ENST00000567635 RFC4P35249 363 aa9.24□□□□□ -0.93
SF3B3-209ENST00000567635 CRKLP46109 303 aaKnown RBP9.24□□□□□ -0.93
SF3B3-209ENST00000567635 NLGN1Q8N2Q7 840 aa9.24□□□□□ -0.93
SF3B3-209ENST00000567635 IL17REQ8NFR9 667 aa9.24□□□□□ -0.93
SF3B3-209ENST00000567635 RSPH6AQ9H0K4 717 aa9.24□□□□□ -0.93
SF3B3-209ENST00000567635 TEFQ10587 303 aa9.23□□□□□ -0.93
SF3B3-209ENST00000567635 INTS5Q6P9B9 1019 aaKnown RBP9.23□□□□□ -0.93
SF3B3-209ENST00000567635 PELP1Q8IZL8 1130 aaKnown RBP9.23□□□□□ -0.93
SF3B3-209ENST00000567635 NLGN2Q8NFZ4 835 aa9.23□□□□□ -0.93
SF3B3-209ENST00000567635 TJP1Q07157 1748 aa9.22□□□□□ -0.93
SF3B3-209ENST00000567635 MRC1P22897 1456 aa9.22□□□□□ -0.93
SF3B3-209ENST00000567635 SIPA1L3O60292 1781 aaPredicted RBP9.22□□□□□ -0.93
SF3B3-209ENST00000567635 CYP19A1P11511 503 aaPredicted RBP9.22□□□□□ -0.93
SF3B3-209ENST00000567635 DDX10Q13206 875 aaKnown RBP9.22□□□□□ -0.93
SF3B3-209ENST00000567635 DNAJC10Q8IXB1 793 aa9.22□□□□□ -0.93
SF3B3-209ENST00000567635 VSIG10Q8N0Z9 540 aa9.22□□□□□ -0.93
SF3B3-209ENST00000567635 CCDC87Q9NVE4 849 aa9.22□□□□□ -0.93
SF3B3-209ENST00000567635 DLG5Q8TDM6 1919 aa9.22□□□□□ -0.93
SF3B3-209ENST00000567635 CICQ96RK0 1608 aaPredicted RBP9.21□□□□□ -0.93
SF3B3-209ENST00000567635 MMP10P09238 476 aa9.21□□□□□ -0.94
SF3B3-209ENST00000567635 GYS1P13807 737 aa9.21□□□□□ -0.94
SF3B3-209ENST00000567635 RALBP1Q15311 655 aa9.21□□□□□ -0.94
SF3B3-209ENST00000567635 TTC5Q8N0Z6 440 aa9.21□□□□□ -0.94
SF3B3-209ENST00000567635 RTF1Q92541 710 aaKnown RBP9.21□□□□□ -0.94
SF3B3-209ENST00000567635 TEX13AQ9BXU3 409 aaPredicted RBP9.21□□□□□ -0.94
SF3B3-209ENST00000567635 UBR2Q8IWV8 1755 aa9.21□□□□□ -0.94
SF3B3-209ENST00000567635 C4AP0C0L4 1744 aa9.2□□□□□ -0.94
SF3B3-209ENST00000567635 KIF13BQ9NQT8 1826 aa9.2□□□□□ -0.94
SF3B3-209ENST00000567635 HTATSF1O43719 755 aaKnown RBP9.2□□□□□ -0.94
SF3B3-209ENST00000567635 GRIN3BO60391 1043 aa9.2□□□□□ -0.94
SF3B3-209ENST00000567635 ZPR1O75312 459 aa9.2□□□□□ -0.94
SF3B3-209ENST00000567635 STARD3NLO95772 234 aa9.2□□□□□ -0.94
SF3B3-209ENST00000567635 NEFMP07197 916 aa9.2□□□□□ -0.94
SF3B3-209ENST00000567635 ZNF790Q6PG37 636 aa9.2□□□□□ -0.94
SF3B3-209ENST00000567635 PNNQ9H307 717 aaKnown RBP9.2□□□□□ -0.94
SF3B3-209ENST00000567635 CEMIPQ8WUJ3 1361 aa9.2□□□□□ -0.94
SF3B3-209ENST00000567635 BTBD11A6QL63 1104 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms