RNA–Protein interactions for RNA: ENST00000567620.1

CHTF18-217, Transcript of chromosome transmission fidelity factor 18, humanhuman

TSL 5

Gene CHTF18, Length 701 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTF18-217ENST00000567620 U2AF1Q01081 240 aaKnown RBP eCLIP20.02■□□□□ 0.87e-8■□□□□ 10.6
CHTF18-217ENST00000567620 COL23A1Q86Y22 540 aaPredicted RBP20.02■□□□□ 0.8
CHTF18-217ENST00000567620 CASZ1Q86V15 1759 aa20.02■□□□□ 0.8
CHTF18-217ENST00000567620 PHF14O94880 888 aa20.01■□□□□ 0.79
CHTF18-217ENST00000567620 FLAD1Q8NFF5 587 aa20.01■□□□□ 0.79
CHTF18-217ENST00000567620 LGR6Q9HBX8 967 aa20.01■□□□□ 0.79
CHTF18-217ENST00000567620 KDM6AO15550 1401 aaPredicted RBP20.01■□□□□ 0.79
CHTF18-217ENST00000567620 PTCD1O75127 700 aaKnown RBP20■□□□□ 0.79
CHTF18-217ENST00000567620 KLHL34Q8N239 644 aa20■□□□□ 0.79
CHTF18-217ENST00000567620 ARXQ96QS3 562 aa20■□□□□ 0.79
CHTF18-217ENST00000567620 RNMTO43148 476 aaKnown RBP19.99■□□□□ 0.79
CHTF18-217ENST00000567620 ITPK1Q13572 414 aa19.99■□□□□ 0.79
CHTF18-217ENST00000567620 LINC00116Q8NCU8 138 aa19.99■□□□□ 0.79
CHTF18-217ENST00000567620 PRKAR2BP31323 418 aa19.98■□□□□ 0.79
CHTF18-217ENST00000567620 GAS2L2Q8NHY3 880 aa19.98■□□□□ 0.79
CHTF18-217ENST00000567620 GNPATO15228 680 aa19.97■□□□□ 0.79
CHTF18-217ENST00000567620 MSL1Q68DK7 614 aa19.97■□□□□ 0.79
CHTF18-217ENST00000567620 SMIM5Q71RC9 77 aa19.97■□□□□ 0.79
CHTF18-217ENST00000567620 FHDC1Q9C0D6 1143 aaPredicted RBP19.97■□□□□ 0.79
CHTF18-217ENST00000567620 SLC52A2Q9HAB3 445 aa19.97■□□□□ 0.79
CHTF18-217ENST00000567620 COL3A1P02461 1466 aaPredicted RBP19.97■□□□□ 0.79
CHTF18-217ENST00000567620 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.95■□□□□ 0.78
CHTF18-217ENST00000567620 GNAT3A8MTJ3 354 aa19.95■□□□□ 0.78
CHTF18-217ENST00000567620 SGIP1Q9BQI5 828 aa19.95■□□□□ 0.78
CHTF18-217ENST00000567620 C5P01031 1676 aa19.94■□□□□ 0.78
CHTF18-217ENST00000567620 NEFMP07197 916 aa19.94■□□□□ 0.78
CHTF18-217ENST00000567620 PHACTR3Q96KR7 559 aa19.94■□□□□ 0.78
CHTF18-217ENST00000567620 FCHSD2O94868 740 aa19.93■□□□□ 0.78
CHTF18-217ENST00000567620 TEFQ10587 303 aa19.93■□□□□ 0.78
CHTF18-217ENST00000567620 SLC4A9Q96Q91 983 aa19.93■□□□□ 0.78
CHTF18-217ENST00000567620 SYT17Q9BSW7 474 aa19.93■□□□□ 0.78
CHTF18-217ENST00000567620 RSPH6AQ9H0K4 717 aa19.93■□□□□ 0.78
CHTF18-217ENST00000567620 RTCBQ9Y3I0 505 aaKnown RBP19.93■□□□□ 0.78
CHTF18-217ENST00000567620 SSFA2P28290 1259 aa19.92■□□□□ 0.78
CHTF18-217ENST00000567620 SLC39A6Q13433 755 aa19.92■□□□□ 0.78
CHTF18-217ENST00000567620 RALBP1Q15311 655 aa19.92■□□□□ 0.78
CHTF18-217ENST00000567620 C4BP0C0L5 1744 aa19.91■□□□□ 0.78
CHTF18-217ENST00000567620 TRAPPC3LQ5T215 181 aa19.91■□□□□ 0.78
CHTF18-217ENST00000567620 AMIGO3Q86WK7 504 aa19.91■□□□□ 0.78
CHTF18-217ENST00000567620 MAP3K5Q99683 1374 aa19.91■□□□□ 0.78
CHTF18-217ENST00000567620 TTC5Q8N0Z6 440 aa19.9■□□□□ 0.78
CHTF18-217ENST00000567620 RTF1Q92541 710 aaKnown RBP19.9■□□□□ 0.78
CHTF18-217ENST00000567620 RC3H1Q5TC82 1133 aaKnown RBP19.89■□□□□ 0.77
CHTF18-217ENST00000567620 TAF1LQ8IZX4 1826 aa19.89■□□□□ 0.77
CHTF18-217ENST00000567620 IL17REQ8NFR9 667 aa19.89■□□□□ 0.77
CHTF18-217ENST00000567620 TUBGCP6Q96RT7 1819 aa19.88■□□□□ 0.77
CHTF18-217ENST00000567620 QSER1Q2KHR3 1735 aa19.88■□□□□ 0.77
CHTF18-217ENST00000567620 RFC4P35249 363 aa19.87■□□□□ 0.77
CHTF18-217ENST00000567620 CRKLP46109 303 aaKnown RBP19.87■□□□□ 0.77
CHTF18-217ENST00000567620 SCN11AQ9UI33 1791 aa19.86■□□□□ 0.77
CHTF18-217ENST00000567620 CNTNAP4Q9C0A0 1308 aa19.86■□□□□ 0.77
CHTF18-217ENST00000567620 RPS6KA4O75676 772 aa19.86■□□□□ 0.77
CHTF18-217ENST00000567620 DNAJC10Q8IXB1 793 aa19.86■□□□□ 0.77
CHTF18-217ENST00000567620 PELP1Q8IZL8 1130 aaKnown RBP19.86■□□□□ 0.77
CHTF18-217ENST00000567620 PNNQ9H307 717 aaKnown RBP19.86■□□□□ 0.77
CHTF18-217ENST00000567620 ARHGEF1Q92888 912 aaKnown RBP19.85■□□□□ 0.77
CHTF18-217ENST00000567620 BTBD11A6QL63 1104 aa19.83■□□□□ 0.77
CHTF18-217ENST00000567620 ADRA2BP18089 450 aa19.83■□□□□ 0.77
CHTF18-217ENST00000567620 GPR162Q16538 588 aa19.83■□□□□ 0.77
CHTF18-217ENST00000567620 MCM10Q7L590 875 aa19.83■□□□□ 0.77
CHTF18-217ENST00000567620 CCDC87Q9NVE4 849 aa19.82■□□□□ 0.76
CHTF18-217ENST00000567620 MYBBP1AQ9BQG0 1328 aaKnown RBP19.81■□□□□ 0.76
CHTF18-217ENST00000567620 MAPK8IP3Q9UPT6 1336 aa19.81■□□□□ 0.76
CHTF18-217ENST00000567620 DCTN1Q14203 1278 aa19.81■□□□□ 0.76
CHTF18-217ENST00000567620 ZNF790Q6PG37 636 aa19.81■□□□□ 0.76
CHTF18-217ENST00000567620 NLGN1Q8N2Q7 840 aa19.81■□□□□ 0.76
CHTF18-217ENST00000567620 UBR3Q6ZT12 1888 aa19.8■□□□□ 0.76
CHTF18-217ENST00000567620 STARD3NLO95772 234 aa19.8■□□□□ 0.76
CHTF18-217ENST00000567620 INTS5Q6P9B9 1019 aaKnown RBP19.8■□□□□ 0.76
CHTF18-217ENST00000567620 NLGN2Q8NFZ4 835 aa19.8■□□□□ 0.76
CHTF18-217ENST00000567620 MRC1P22897 1456 aa19.79■□□□□ 0.76
CHTF18-217ENST00000567620 HTATSF1O43719 755 aaKnown RBP19.79■□□□□ 0.76
CHTF18-217ENST00000567620 MMP10P09238 476 aa19.79■□□□□ 0.76
CHTF18-217ENST00000567620 CYP19A1P11511 503 aaPredicted RBP19.79■□□□□ 0.76
CHTF18-217ENST00000567620 VSIG10Q8N0Z9 540 aa19.79■□□□□ 0.76
CHTF18-217ENST00000567620 ZNF496Q96IT1 587 aaPredicted RBP19.79■□□□□ 0.76
CHTF18-217ENST00000567620 FMNL2Q96PY5 1086 aa19.79■□□□□ 0.76
CHTF18-217ENST00000567620 ZPR1O75312 459 aa19.78■□□□□ 0.76
CHTF18-217ENST00000567620 CANXP27824 592 aaKnown RBP19.78■□□□□ 0.76
CHTF18-217ENST00000567620 YY1P25490 414 aa19.77■□□□□ 0.76
CHTF18-217ENST00000567620 WDR43Q15061 677 aaKnown RBP eCLIP19.77■□□□□ 0.76
CHTF18-217ENST00000567620 TEX13AQ9BXU3 409 aaPredicted RBP19.77■□□□□ 0.76
CHTF18-217ENST00000567620 CD2APQ9Y5K6 639 aa19.77■□□□□ 0.76
CHTF18-217ENST00000567620 ZNF831Q5JPB2 1677 aa19.77■□□□□ 0.76
CHTF18-217ENST00000567620 CEMIPQ8WUJ3 1361 aa19.76■□□□□ 0.75
CHTF18-217ENST00000567620 KCNQ3O43525 872 aa19.76■□□□□ 0.75
CHTF18-217ENST00000567620 GYS1P13807 737 aa19.76■□□□□ 0.75
CHTF18-217ENST00000567620 NPM2Q86SE8 214 aaKnown RBP19.76■□□□□ 0.75
CHTF18-217ENST00000567620 PLEKHF1Q96S99 279 aa19.76■□□□□ 0.75
CHTF18-217ENST00000567620 SRP68Q9UHB9 627 aaKnown RBP19.76■□□□□ 0.75
CHTF18-217ENST00000567620 ZNF330Q9Y3S2 320 aaPredicted RBP19.76■□□□□ 0.75
CHTF18-217ENST00000567620 PARP3Q9Y6F1 533 aa19.76■□□□□ 0.75
CHTF18-217ENST00000567620 TAF7Q15545 349 aaPredicted RBP19.75■□□□□ 0.75
CHTF18-217ENST00000567620 NFE2L2Q16236 605 aa19.75■□□□□ 0.75
CHTF18-217ENST00000567620 VIRMAQ69YN4 1812 aaKnown RBP19.74■□□□□ 0.75
CHTF18-217ENST00000567620 HEG1Q9ULI3 1381 aa19.74■□□□□ 0.75
CHTF18-217ENST00000567620 PRKRIP1Q9H875 184 aaPredicted RBP19.74■□□□□ 0.75
CHTF18-217ENST00000567620 ZBTB1Q9Y2K1 713 aa19.74■□□□□ 0.75
CHTF18-217ENST00000567620 ADAMTS7Q9UKP4 1686 aa19.74■□□□□ 0.75
CHTF18-217ENST00000567620 KCPQ6ZWJ8 1503 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms