RNA–Protein interactions for RNA: ENST00000567470.1

RBFOX1-217, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2

Gene RBFOX1, Length 420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-217ENST00000567470 MSL1Q68DK7 614 aa24.52■■□□□ 1.52
RBFOX1-217ENST00000567470 LINC00116Q8NCU8 138 aa24.52■■□□□ 1.52
RBFOX1-217ENST00000567470 UBR3Q6ZT12 1888 aa24.51■■□□□ 1.51
RBFOX1-217ENST00000567470 CABP4P57796 275 aa24.51■■□□□ 1.51
RBFOX1-217ENST00000567470 DIAPH1O60610 1272 aaKnown RBP24.5■■□□□ 1.51
RBFOX1-217ENST00000567470 PHF14O94880 888 aa24.5■■□□□ 1.51
RBFOX1-217ENST00000567470 HMOX1P09601 288 aa24.5■■□□□ 1.51
RBFOX1-217ENST00000567470 ATP6V1AP38606 617 aa24.5■■□□□ 1.51
RBFOX1-217ENST00000567470 ITPK1Q13572 414 aa24.5■■□□□ 1.51
RBFOX1-217ENST00000567470 AMIGO3Q86WK7 504 aa24.49■■□□□ 1.51
RBFOX1-217ENST00000567470 COL3A1P02461 1466 aaPredicted RBP24.48■■□□□ 1.51
RBFOX1-217ENST00000567470 YY1P25490 414 aa24.48■■□□□ 1.51
RBFOX1-217ENST00000567470 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.47■■□□□ 1.51
RBFOX1-217ENST00000567470 UTRNP46939 3433 aa24.46■■□□□ 1.51
RBFOX1-217ENST00000567470 GNPATO15228 680 aa24.46■■□□□ 1.51
RBFOX1-217ENST00000567470 SMIM5Q71RC9 77 aa24.46■■□□□ 1.51
RBFOX1-217ENST00000567470 RBM42Q9BTD8 480 aaKnown RBP24.46■■□□□ 1.51
RBFOX1-217ENST00000567470 SCN11AQ9UI33 1791 aa24.46■■□□□ 1.51
RBFOX1-217ENST00000567470 ZNF831Q5JPB2 1677 aa24.46■■□□□ 1.51
RBFOX1-217ENST00000567470 SSFA2P28290 1259 aa24.45■■□□□ 1.5
RBFOX1-217ENST00000567470 AKAP4Q5JQC9 854 aa24.44■■□□□ 1.5
RBFOX1-217ENST00000567470 SLC4A9Q96Q91 983 aa24.43■■□□□ 1.5
RBFOX1-217ENST00000567470 GOLGB1Q14789 3259 aaKnown RBP24.43■■□□□ 1.5
RBFOX1-217ENST00000567470 COL5A3P25940 1745 aaPredicted RBP24.42■■□□□ 1.5
RBFOX1-217ENST00000567470 NFATC2IPQ8NCF5 419 aa24.42■■□□□ 1.5
RBFOX1-217ENST00000567470 U2SURPO15042 1029 aaKnown RBP24.41■■□□□ 1.5
RBFOX1-217ENST00000567470 NLGN2Q8NFZ4 835 aa24.41■■□□□ 1.5
RBFOX1-217ENST00000567470 MRC1P22897 1456 aa24.39■■□□□ 1.5
RBFOX1-217ENST00000567470 PTCD1O75127 700 aaKnown RBP24.39■■□□□ 1.49
RBFOX1-217ENST00000567470 GPR162Q16538 588 aa24.38■■□□□ 1.49
RBFOX1-217ENST00000567470 MTHFSDQ2M296 383 aaKnown RBP24.38■■□□□ 1.49
RBFOX1-217ENST00000567470 PELP1Q8IZL8 1130 aaKnown RBP24.38■■□□□ 1.49
RBFOX1-217ENST00000567470 CNTNAP4Q9C0A0 1308 aa24.37■■□□□ 1.49
RBFOX1-217ENST00000567470 CFAP53Q96M91 514 aa24.37■■□□□ 1.49
RBFOX1-217ENST00000567470 SLC52A2Q9HAB3 445 aa24.37■■□□□ 1.49
RBFOX1-217ENST00000567470 LGR6Q9HBX8 967 aa24.37■■□□□ 1.49
RBFOX1-217ENST00000567470 RTCBQ9Y3I0 505 aaKnown RBP24.37■■□□□ 1.49
RBFOX1-217ENST00000567470 VIRMAQ69YN4 1812 aaKnown RBP24.37■■□□□ 1.49
RBFOX1-217ENST00000567470 RNMTO43148 476 aaKnown RBP24.36■■□□□ 1.49
RBFOX1-217ENST00000567470 TJP1Q07157 1748 aa24.35■■□□□ 1.49
RBFOX1-217ENST00000567470 ADAMTS7Q9UKP4 1686 aa24.35■■□□□ 1.49
RBFOX1-217ENST00000567470 CICQ96RK0 1608 aaPredicted RBP24.35■■□□□ 1.49
RBFOX1-217ENST00000567470 RC3H1Q5TC82 1133 aaKnown RBP24.34■■□□□ 1.49
RBFOX1-217ENST00000567470 TRAPPC3LQ5T215 181 aa24.33■■□□□ 1.49
RBFOX1-217ENST00000567470 ADRA2BP18089 450 aa24.32■■□□□ 1.48
RBFOX1-217ENST00000567470 PPP2R1AP30153 589 aa24.32■■□□□ 1.48
RBFOX1-217ENST00000567470 CD2APQ9Y5K6 639 aa24.32■■□□□ 1.48
RBFOX1-217ENST00000567470 CHD4Q14839 1912 aa24.31■■□□□ 1.48
RBFOX1-217ENST00000567470 MYH14Q7Z406 1995 aaKnown RBP24.31■■□□□ 1.48
RBFOX1-217ENST00000567470 C4AP0C0L4 1744 aa24.3■■□□□ 1.48
RBFOX1-217ENST00000567470 RPS6KA4O75676 772 aa24.3■■□□□ 1.48
RBFOX1-217ENST00000567470 CRKLP46109 303 aaKnown RBP24.3■■□□□ 1.48
RBFOX1-217ENST00000567470 GAS2L2Q8NHY3 880 aa24.3■■□□□ 1.48
RBFOX1-217ENST00000567470 SLC39A6Q13433 755 aa24.29■■□□□ 1.48
RBFOX1-217ENST00000567470 ARHGEF1Q92888 912 aaKnown RBP24.29■■□□□ 1.48
RBFOX1-217ENST00000567470 NUDCQ9Y266 331 aa24.29■■□□□ 1.48
RBFOX1-217ENST00000567470 KCPQ6ZWJ8 1503 aa24.29■■□□□ 1.48
RBFOX1-217ENST00000567470 MMP10P09238 476 aa24.28■■□□□ 1.48
RBFOX1-217ENST00000567470 RFC4P35249 363 aa24.28■■□□□ 1.48
RBFOX1-217ENST00000567470 PRKAR2BP31323 418 aa24.27■■□□□ 1.48
RBFOX1-217ENST00000567470 GNAT3A8MTJ3 354 aa24.26■■□□□ 1.47
RBFOX1-217ENST00000567470 YBX3P16989 372 aaKnown RBP eCLIP24.26■■□□□ 1.47
RBFOX1-217ENST00000567470 DNAJC10Q8IXB1 793 aa24.26■■□□□ 1.47
RBFOX1-217ENST00000567470 RSPH6AQ9H0K4 717 aa24.26■■□□□ 1.47
RBFOX1-217ENST00000567470 U2AF1L5P0DN76 240 aaPredicted RBP24.25■■□□□ 1.47
RBFOX1-217ENST00000567470 U2AF1Q01081 240 aaKnown RBP eCLIP24.25■■□□□ 1.47
RBFOX1-217ENST00000567470 UBR2Q8IWV8 1755 aa24.24■■□□□ 1.47
RBFOX1-217ENST00000567470 NLGN1Q8N2Q7 840 aa24.24■■□□□ 1.47
RBFOX1-217ENST00000567470 GYS1P13807 737 aa24.23■■□□□ 1.47
RBFOX1-217ENST00000567470 TEFQ10587 303 aa24.23■■□□□ 1.47
RBFOX1-217ENST00000567470 PHACTR3Q96KR7 559 aa24.23■■□□□ 1.47
RBFOX1-217ENST00000567470 CCDC87Q9NVE4 849 aa24.23■■□□□ 1.47
RBFOX1-217ENST00000567470 GRIN3BO60391 1043 aa24.22■■□□□ 1.47
RBFOX1-217ENST00000567470 INTS5Q6P9B9 1019 aaKnown RBP24.22■■□□□ 1.47
RBFOX1-217ENST00000567470 TTC5Q8N0Z6 440 aa24.22■■□□□ 1.47
RBFOX1-217ENST00000567470 ZNF784Q8NCA9 323 aaPredicted RBP24.21■■□□□ 1.47
RBFOX1-217ENST00000567470 IL17REQ8NFR9 667 aa24.21■■□□□ 1.47
RBFOX1-217ENST00000567470 SIPA1L3O60292 1781 aaPredicted RBP24.21■■□□□ 1.47
RBFOX1-217ENST00000567470 USP42Q9H9J4 1324 aaKnown RBP24.2■■□□□ 1.46
RBFOX1-217ENST00000567470 SRP68Q9UHB9 627 aaKnown RBP24.2■■□□□ 1.46
RBFOX1-217ENST00000567470 CYP19A1P11511 503 aaPredicted RBP24.19■■□□□ 1.46
RBFOX1-217ENST00000567470 WWC3Q9ULE0 1092 aa24.19■■□□□ 1.46
RBFOX1-217ENST00000567470 C10orf71Q711Q0 1435 aa24.18■■□□□ 1.46
RBFOX1-217ENST00000567470 SOS1Q07889 1333 aaPredicted RBP24.18■■□□□ 1.46
RBFOX1-217ENST00000567470 VSIG10Q8N0Z9 540 aa24.18■■□□□ 1.46
RBFOX1-217ENST00000567470 CEMIPQ8WUJ3 1361 aa24.17■■□□□ 1.46
RBFOX1-217ENST00000567470 KIF13BQ9NQT8 1826 aa24.17■■□□□ 1.46
RBFOX1-217ENST00000567470 FCHSD2O94868 740 aa24.17■■□□□ 1.46
RBFOX1-217ENST00000567470 PARP3Q9Y6F1 533 aa24.17■■□□□ 1.46
RBFOX1-217ENST00000567470 PXDNLA1KZ92 1463 aa24.16■■□□□ 1.46
RBFOX1-217ENST00000567470 ZNF790Q6PG37 636 aa24.16■■□□□ 1.46
RBFOX1-217ENST00000567470 ZBTB1Q9Y2K1 713 aa24.16■■□□□ 1.46
RBFOX1-217ENST00000567470 COL15A1P39059 1388 aa24.16■■□□□ 1.46
RBFOX1-217ENST00000567470 FKBP8Q14318 412 aa24.15■■□□□ 1.46
RBFOX1-217ENST00000567470 ZPR1O75312 459 aa24.14■■□□□ 1.45
RBFOX1-217ENST00000567470 ZNF496Q96IT1 587 aaPredicted RBP24.14■■□□□ 1.45
RBFOX1-217ENST00000567470 KIAA1551Q9HCM1 1747 aa24.14■■□□□ 1.45
RBFOX1-217ENST00000567470 HEG1Q9ULI3 1381 aa24.14■■□□□ 1.45
RBFOX1-217ENST00000567470 STARD3NLO95772 234 aa24.13■■□□□ 1.45
RBFOX1-217ENST00000567470 RTF1Q92541 710 aaKnown RBP24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms