RNA–Protein interactions for RNA: ENST00000567445.1

CDH13-210, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 1,456 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-210ENST00000567445 SEC24BO95487 1268 aa12.79□□□□□ -0.36
CDH13-210ENST00000567445 PTGER2P43116 358 aa12.79□□□□□ -0.36
CDH13-210ENST00000567445 PAPPAQ13219 1627 aa12.79□□□□□ -0.36
CDH13-210ENST00000567445 RGPD2P0DJD1 1756 aa12.79□□□□□ -0.36
CDH13-210ENST00000567445 ZCRB1Q8TBF4 217 aaKnown RBP12.78□□□□□ -0.36
CDH13-210ENST00000567445 MTFR1LQ9H019 292 aa12.78□□□□□ -0.36
CDH13-210ENST00000567445 MEGF6O75095 1541 aa12.78□□□□□ -0.36
CDH13-210ENST00000567445 SMG6Q86US8 1419 aaKnown RBP12.78□□□□□ -0.36
CDH13-210ENST00000567445 SLC27A3Q5K4L6 730 aa12.78□□□□□ -0.36
CDH13-210ENST00000567445 NBPF6Q5VWK0 638 aa12.78□□□□□ -0.36
CDH13-210ENST00000567445 NBPF4Q96M43 638 aa12.78□□□□□ -0.36
CDH13-210ENST00000567445 LRRC4BQ9NT99 713 aa12.78□□□□□ -0.36
CDH13-210ENST00000567445 KIF20BQ96Q89 1820 aa12.77□□□□□ -0.36
CDH13-210ENST00000567445 CGNL1Q0VF96 1302 aa12.77□□□□□ -0.37
CDH13-210ENST00000567445 CLSPNQ9HAW4 1339 aa12.77□□□□□ -0.37
CDH13-210ENST00000567445 POTEJP0CG39 1038 aa12.77□□□□□ -0.37
CDH13-210ENST00000567445 MAMSTRQ6ZN01 415 aa12.77□□□□□ -0.37
CDH13-210ENST00000567445 SYTL4Q96C24 671 aaPredicted RBP12.77□□□□□ -0.37
CDH13-210ENST00000567445 MYOM1P52179 1685 aa12.76□□□□□ -0.37
CDH13-210ENST00000567445 INSRP06213 1382 aa12.76□□□□□ -0.37
CDH13-210ENST00000567445 FLT4P35916 1363 aa12.76□□□□□ -0.37
CDH13-210ENST00000567445 KIF24Q5T7B8 1368 aa12.76□□□□□ -0.37
CDH13-210ENST00000567445 SHANK3Q9BYB0 1731 aa12.76□□□□□ -0.37
CDH13-210ENST00000567445 PRIM1P49642 420 aaKnown RBP12.76□□□□□ -0.37
CDH13-210ENST00000567445 ZNF827Q17R98 1081 aa12.76□□□□□ -0.37
CDH13-210ENST00000567445 HSP90AB2PQ58FF8 381 aa12.76□□□□□ -0.37
CDH13-210ENST00000567445 RAPGEF4Q8WZA2 1011 aa12.76□□□□□ -0.37
CDH13-210ENST00000567445 CARD14Q9BXL6 1004 aa12.76□□□□□ -0.37
CDH13-210ENST00000567445 DOT1LQ8TEK3 1739 aa12.75□□□□□ -0.37
CDH13-210ENST00000567445 YY1P25490 414 aa12.75□□□□□ -0.37
CDH13-210ENST00000567445 USHBP1Q8N6Y0 703 aa12.75□□□□□ -0.37
CDH13-210ENST00000567445 COLQQ9Y215 455 aaPredicted RBP12.75□□□□□ -0.37
CDH13-210ENST00000567445 NSD3Q9BZ95 1437 aa12.75□□□□□ -0.37
CDH13-210ENST00000567445 NSD2O96028 1365 aa12.74□□□□□ -0.37
CDH13-210ENST00000567445 PCGF6Q9BYE7 350 aa12.74□□□□□ -0.37
CDH13-210ENST00000567445 FHDC1Q9C0D6 1143 aaPredicted RBP12.74□□□□□ -0.37
CDH13-210ENST00000567445 TATP17735 454 aaPredicted RBP12.73□□□□□ -0.37
CDH13-210ENST00000567445 ARXQ96QS3 562 aa12.72□□□□□ -0.37
CDH13-210ENST00000567445 SYT17Q9BSW7 474 aa12.72□□□□□ -0.37
CDH13-210ENST00000567445 PCDH11XQ9BZA7 1347 aa12.72□□□□□ -0.37
CDH13-210ENST00000567445 PCDH11YQ9BZA8 1340 aa12.72□□□□□ -0.37
CDH13-210ENST00000567445 KCNQ4P56696 695 aa12.72□□□□□ -0.37
CDH13-210ENST00000567445 SLC16A10Q8TF71 515 aa12.72□□□□□ -0.37
CDH13-210ENST00000567445 EMILIN1Q9Y6C2 1016 aa12.72□□□□□ -0.37
CDH13-210ENST00000567445 LY75O60449 1722 aa12.71□□□□□ -0.37
CDH13-210ENST00000567445 QSER1Q2KHR3 1735 aa12.71□□□□□ -0.37
CDH13-210ENST00000567445 PNPLA7Q6ZV29 1317 aa12.71□□□□□ -0.37
CDH13-210ENST00000567445 SCUBE2Q9NQ36 999 aa12.71□□□□□ -0.38
CDH13-210ENST00000567445 TFCP2L1Q9NZI6 479 aa12.71□□□□□ -0.38
CDH13-210ENST00000567445 CCNL1Q9UK58 526 aaPredicted RBP12.71□□□□□ -0.38
CDH13-210ENST00000567445 PPM1GO15355 546 aaPredicted RBP12.7□□□□□ -0.38
CDH13-210ENST00000567445 UTRNP46939 3433 aa12.7□□□□□ -0.38
CDH13-210ENST00000567445 MAP3K5Q99683 1374 aa12.7□□□□□ -0.38
CDH13-210ENST00000567445 WASHC2AQ641Q2 1341 aa12.68□□□□□ -0.38
CDH13-210ENST00000567445 ANKRD26Q9UPS8 1709 aa12.68□□□□□ -0.38
CDH13-210ENST00000567445 TUBGCP6Q96RT7 1819 aa12.68□□□□□ -0.38
CDH13-210ENST00000567445 CYP27B1O15528 508 aa12.68□□□□□ -0.38
CDH13-210ENST00000567445 PSEN1P49768 467 aa12.68□□□□□ -0.38
CDH13-210ENST00000567445 NCAPD2Q15021 1401 aa12.68□□□□□ -0.38
CDH13-210ENST00000567445 PLCG2P16885 1265 aa12.67□□□□□ -0.38
CDH13-210ENST00000567445 POLD1P28340 1107 aa12.67□□□□□ -0.38
CDH13-210ENST00000567445 POLR3GLQ9BT43 218 aa12.67□□□□□ -0.38
CDH13-210ENST00000567445 MAP2P11137 1827 aaKnown RBP12.67□□□□□ -0.38
CDH13-210ENST00000567445 HMGB2P26583 209 aaKnown RBP12.66□□□□□ -0.38
CDH13-210ENST00000567445 EIF4G2P78344 907 aaKnown RBP eCLIP12.66□□□□□ -0.38
CDH13-210ENST00000567445 IRX5P78411 483 aaPredicted RBP12.66□□□□□ -0.38
CDH13-210ENST00000567445 DAXXQ9UER7 740 aaPredicted RBP12.66□□□□□ -0.38
CDH13-210ENST00000567445 COL24A1Q17RW2 1714 aa12.66□□□□□ -0.38
CDH13-210ENST00000567445 PKD1L3Q7Z443 1732 aa12.66□□□□□ -0.38
CDH13-210ENST00000567445 PDAP1Q13442 181 aaKnown RBP12.65□□□□□ -0.38
CDH13-210ENST00000567445 MPRIPQ6WCQ1 1025 aa12.65□□□□□ -0.38
CDH13-210ENST00000567445 POLKQ9UBT6 870 aa12.65□□□□□ -0.38
CDH13-210ENST00000567445 SPG7Q9UQ90 795 aa12.65□□□□□ -0.38
CDH13-210ENST00000567445 PALLDQ8WX93 1383 aa12.65□□□□□ -0.38
CDH13-210ENST00000567445 HSPA5P11021 654 aaKnown RBP12.65□□□□□ -0.38
CDH13-210ENST00000567445 NKX1-1Q15270 411 aaPredicted RBP12.65□□□□□ -0.38
CDH13-210ENST00000567445 EYA1Q99502 592 aa12.65□□□□□ -0.38
CDH13-210ENST00000567445 GOLGA2Q08379 1002 aa12.64□□□□□ -0.39
CDH13-210ENST00000567445 COL23A1Q86Y22 540 aaPredicted RBP12.64□□□□□ -0.39
CDH13-210ENST00000567445 SMARCC1Q92922 1105 aaPredicted RBP12.64□□□□□ -0.39
CDH13-210ENST00000567445 OCEL1Q9H607 264 aa12.64□□□□□ -0.39
CDH13-210ENST00000567445 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.64□□□□□ -0.39
CDH13-210ENST00000567445 TOGARAM1Q9Y4F4 1720 aa12.64□□□□□ -0.39
CDH13-210ENST00000567445 ITGB4P16144 1822 aa12.63□□□□□ -0.39
CDH13-210ENST00000567445 C5P01031 1676 aa12.63□□□□□ -0.39
CDH13-210ENST00000567445 TNNT2P45379 298 aaPredicted RBP12.63□□□□□ -0.39
CDH13-210ENST00000567445 FLAD1Q8NFF5 587 aa12.62□□□□□ -0.39
CDH13-210ENST00000567445 CCER1Q8TC90 406 aaPredicted RBP12.62□□□□□ -0.39
CDH13-210ENST00000567445 PIGBQ92521 554 aa12.62□□□□□ -0.39
CDH13-210ENST00000567445 PANK3Q9H999 370 aa12.62□□□□□ -0.39
CDH13-210ENST00000567445 CHD4Q14839 1912 aa12.62□□□□□ -0.39
CDH13-210ENST00000567445 TAF1LQ8IZX4 1826 aa12.62□□□□□ -0.39
CDH13-210ENST00000567445 EIF4A2Q14240 407 aaKnown RBP12.61□□□□□ -0.39
CDH13-210ENST00000567445 GPR162Q16538 588 aa12.61□□□□□ -0.39
CDH13-210ENST00000567445 PLEKHG2Q9H7P9 1386 aa12.61□□□□□ -0.39
CDH13-210ENST00000567445 GOLGB1Q14789 3259 aaKnown RBP12.61□□□□□ -0.39
CDH13-210ENST00000567445 MKRN3Q13064 507 aaKnown RBP12.6□□□□□ -0.39
CDH13-210ENST00000567445 IFNL2Q8IZJ0 200 aa12.6□□□□□ -0.39
CDH13-210ENST00000567445 ZNF784Q8NCA9 323 aaPredicted RBP12.6□□□□□ -0.39
CDH13-210ENST00000567445 PHKG2P15735 406 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms