RNA–Protein interactions for RNA: ENST00000567377.5

COMMD4-218, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-218ENST00000567377 MAP3K5Q99683 1374 aa24.4■■□□□ 1.5
COMMD4-218ENST00000567377 SYT17Q9BSW7 474 aa24.39■■□□□ 1.49
COMMD4-218ENST00000567377 COL3A1P02461 1466 aaPredicted RBP24.38■■□□□ 1.49
COMMD4-218ENST00000567377 U2SURPO15042 1029 aaKnown RBP24.38■■□□□ 1.49
COMMD4-218ENST00000567377 SSFA2P28290 1259 aa24.38■■□□□ 1.49
COMMD4-218ENST00000567377 FHDC1Q9C0D6 1143 aaPredicted RBP24.38■■□□□ 1.49
COMMD4-218ENST00000567377 C4BP0C0L5 1744 aa24.38■■□□□ 1.49
COMMD4-218ENST00000567377 TUBGCP6Q96RT7 1819 aa24.38■■□□□ 1.49
COMMD4-218ENST00000567377 NFATC2IPQ8NCF5 419 aa24.37■■□□□ 1.49
COMMD4-218ENST00000567377 PPP2R1AP30153 589 aa24.36■■□□□ 1.49
COMMD4-218ENST00000567377 LINC00116Q8NCU8 138 aa24.36■■□□□ 1.49
COMMD4-218ENST00000567377 RBM42Q9BTD8 480 aaKnown RBP24.36■■□□□ 1.49
COMMD4-218ENST00000567377 COL24A1Q17RW2 1714 aa24.35■■□□□ 1.49
COMMD4-218ENST00000567377 ZNF831Q5JPB2 1677 aa24.35■■□□□ 1.49
COMMD4-218ENST00000567377 ITPK1Q13572 414 aa24.35■■□□□ 1.49
COMMD4-218ENST00000567377 MTHFSDQ2M296 383 aaKnown RBP24.35■■□□□ 1.49
COMMD4-218ENST00000567377 RC3H1Q5TC82 1133 aaKnown RBP24.35■■□□□ 1.49
COMMD4-218ENST00000567377 GAS2L2Q8NHY3 880 aa24.34■■□□□ 1.49
COMMD4-218ENST00000567377 SLC52A2Q9HAB3 445 aa24.34■■□□□ 1.49
COMMD4-218ENST00000567377 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.33■■□□□ 1.49
COMMD4-218ENST00000567377 RNMTO43148 476 aaKnown RBP24.33■■□□□ 1.49
COMMD4-218ENST00000567377 SCN11AQ9UI33 1791 aa24.31■■□□□ 1.48
COMMD4-218ENST00000567377 GNPATO15228 680 aa24.31■■□□□ 1.48
COMMD4-218ENST00000567377 ADRA2BP18089 450 aa24.3■■□□□ 1.48
COMMD4-218ENST00000567377 SLC4A9Q96Q91 983 aa24.3■■□□□ 1.48
COMMD4-218ENST00000567377 LGR6Q9HBX8 967 aa24.3■■□□□ 1.48
COMMD4-218ENST00000567377 RTCBQ9Y3I0 505 aaKnown RBP24.3■■□□□ 1.48
COMMD4-218ENST00000567377 CNTNAP4Q9C0A0 1308 aa24.3■■□□□ 1.48
COMMD4-218ENST00000567377 UBR3Q6ZT12 1888 aa24.29■■□□□ 1.48
COMMD4-218ENST00000567377 GNAT3A8MTJ3 354 aa24.28■■□□□ 1.48
COMMD4-218ENST00000567377 PTCD1O75127 700 aaKnown RBP24.28■■□□□ 1.48
COMMD4-218ENST00000567377 FCHSD2O94868 740 aa24.28■■□□□ 1.48
COMMD4-218ENST00000567377 PHF14O94880 888 aa24.28■■□□□ 1.48
COMMD4-218ENST00000567377 TRAPPC3LQ5T215 181 aa24.27■■□□□ 1.48
COMMD4-218ENST00000567377 MRC1P22897 1456 aa24.26■■□□□ 1.47
COMMD4-218ENST00000567377 RPS6KA4O75676 772 aa24.26■■□□□ 1.47
COMMD4-218ENST00000567377 U2AF1L5P0DN76 240 aaPredicted RBP24.26■■□□□ 1.47
COMMD4-218ENST00000567377 U2AF1Q01081 240 aaKnown RBP eCLIP24.26■■□□□ 1.47
COMMD4-218ENST00000567377 RSPH6AQ9H0K4 717 aa24.26■■□□□ 1.47
COMMD4-218ENST00000567377 PRKAR2BP31323 418 aa24.25■■□□□ 1.47
COMMD4-218ENST00000567377 MSL1Q68DK7 614 aa24.25■■□□□ 1.47
COMMD4-218ENST00000567377 AMIGO3Q86WK7 504 aa24.25■■□□□ 1.47
COMMD4-218ENST00000567377 ADAMTS7Q9UKP4 1686 aa24.24■■□□□ 1.47
COMMD4-218ENST00000567377 TEFQ10587 303 aa24.23■■□□□ 1.47
COMMD4-218ENST00000567377 RALBP1Q15311 655 aa24.23■■□□□ 1.47
COMMD4-218ENST00000567377 VSIG10Q8N0Z9 540 aa24.23■■□□□ 1.47
COMMD4-218ENST00000567377 KLHL34Q8N239 644 aa24.23■■□□□ 1.47
COMMD4-218ENST00000567377 CD2APQ9Y5K6 639 aa24.23■■□□□ 1.47
COMMD4-218ENST00000567377 NLGN1Q8N2Q7 840 aa24.21■■□□□ 1.47
COMMD4-218ENST00000567377 NEFMP07197 916 aa24.2■■□□□ 1.46
COMMD4-218ENST00000567377 RFC4P35249 363 aa24.2■■□□□ 1.46
COMMD4-218ENST00000567377 CRKLP46109 303 aaKnown RBP24.2■■□□□ 1.46
COMMD4-218ENST00000567377 TTC5Q8N0Z6 440 aa24.2■■□□□ 1.46
COMMD4-218ENST00000567377 IL17REQ8NFR9 667 aa24.2■■□□□ 1.46
COMMD4-218ENST00000567377 PHACTR3Q96KR7 559 aa24.2■■□□□ 1.46
COMMD4-218ENST00000567377 COL5A3P25940 1745 aaPredicted RBP24.2■■□□□ 1.46
COMMD4-218ENST00000567377 CICQ96RK0 1608 aaPredicted RBP24.2■■□□□ 1.46
COMMD4-218ENST00000567377 ZEB1P37275 1124 aaPredicted RBP24.19■■□□□ 1.46
COMMD4-218ENST00000567377 ARHGEF1Q92888 912 aaKnown RBP24.19■■□□□ 1.46
COMMD4-218ENST00000567377 PNNQ9H307 717 aaKnown RBP24.19■■□□□ 1.46
COMMD4-218ENST00000567377 HTATSF1O43719 755 aaKnown RBP24.18■■□□□ 1.46
COMMD4-218ENST00000567377 SLC39A6Q13433 755 aa24.18■■□□□ 1.46
COMMD4-218ENST00000567377 SMIM5Q71RC9 77 aa24.18■■□□□ 1.46
COMMD4-218ENST00000567377 CEMIPQ8WUJ3 1361 aa24.17■■□□□ 1.46
COMMD4-218ENST00000567377 VIRMAQ69YN4 1812 aaKnown RBP24.17■■□□□ 1.46
COMMD4-218ENST00000567377 YY1P25490 414 aa24.17■■□□□ 1.46
COMMD4-218ENST00000567377 GPR162Q16538 588 aa24.17■■□□□ 1.46
COMMD4-218ENST00000567377 RTF1Q92541 710 aaKnown RBP24.17■■□□□ 1.46
COMMD4-218ENST00000567377 DDX10Q13206 875 aaKnown RBP24.16■■□□□ 1.46
COMMD4-218ENST00000567377 TEX13AQ9BXU3 409 aaPredicted RBP24.16■■□□□ 1.46
COMMD4-218ENST00000567377 CCDC87Q9NVE4 849 aa24.16■■□□□ 1.46
COMMD4-218ENST00000567377 MYH14Q7Z406 1995 aaKnown RBP24.15■■□□□ 1.46
COMMD4-218ENST00000567377 DNAJC10Q8IXB1 793 aa24.15■■□□□ 1.46
COMMD4-218ENST00000567377 CYP19A1P11511 503 aaPredicted RBP24.14■■□□□ 1.45
COMMD4-218ENST00000567377 INTS5Q6P9B9 1019 aaKnown RBP24.14■■□□□ 1.45
COMMD4-218ENST00000567377 ZNF790Q6PG37 636 aa24.14■■□□□ 1.45
COMMD4-218ENST00000567377 STARD3NLO95772 234 aa24.13■■□□□ 1.45
COMMD4-218ENST00000567377 NLGN2Q8NFZ4 835 aa24.13■■□□□ 1.45
COMMD4-218ENST00000567377 KCPQ6ZWJ8 1503 aa24.12■■□□□ 1.45
COMMD4-218ENST00000567377 GRIN3BO60391 1043 aa24.12■■□□□ 1.45
COMMD4-218ENST00000567377 MMP10P09238 476 aa24.12■■□□□ 1.45
COMMD4-218ENST00000567377 GYS1P13807 737 aa24.12■■□□□ 1.45
COMMD4-218ENST00000567377 TJP1Q07157 1748 aa24.12■■□□□ 1.45
COMMD4-218ENST00000567377 BTBD11A6QL63 1104 aa24.1■■□□□ 1.45
COMMD4-218ENST00000567377 FMNL2Q96PY5 1086 aa24.1■■□□□ 1.45
COMMD4-218ENST00000567377 SOS1Q07889 1333 aaPredicted RBP24.09■■□□□ 1.45
COMMD4-218ENST00000567377 USP42Q9H9J4 1324 aaKnown RBP24.09■■□□□ 1.45
COMMD4-218ENST00000567377 HEG1Q9ULI3 1381 aa24.08■■□□□ 1.45
COMMD4-218ENST00000567377 ZPR1O75312 459 aa24.08■■□□□ 1.45
COMMD4-218ENST00000567377 ZNF496Q96IT1 587 aaPredicted RBP24.08■■□□□ 1.45
COMMD4-218ENST00000567377 PARP3Q9Y6F1 533 aa24.08■■□□□ 1.45
COMMD4-218ENST00000567377 UBR2Q8IWV8 1755 aa24.08■■□□□ 1.44
COMMD4-218ENST00000567377 UTRNP46939 3433 aa24.07■■□□□ 1.44
COMMD4-218ENST00000567377 PELP1Q8IZL8 1130 aaKnown RBP24.07■■□□□ 1.44
COMMD4-218ENST00000567377 MYBBP1AQ9BQG0 1328 aaKnown RBP24.07■■□□□ 1.44
COMMD4-218ENST00000567377 SIPA1L3O60292 1781 aaPredicted RBP24.06■■□□□ 1.44
COMMD4-218ENST00000567377 A0A087WZG4 1122 aa24.05■■□□□ 1.44
COMMD4-218ENST00000567377 PLEKHF1Q96S99 279 aa24.05■■□□□ 1.44
COMMD4-218ENST00000567377 CHD4Q14839 1912 aa24.05■■□□□ 1.44
COMMD4-218ENST00000567377 MAPK8IP3Q9UPT6 1336 aa24.05■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms