RNA–Protein interactions for RNA: ENST00000566872.5

SCAMP5-211, Transcript of secretory carrier membrane protein 5, humanhuman

TSL 4

Gene SCAMP5, Length 561 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP5-211ENST00000566872 BAG6P46379 1132 aa18.6■□□□□ 0.57
SCAMP5-211ENST00000566872 THUMPD2Q9BTF0 503 aaKnown RBP18.6■□□□□ 0.57
SCAMP5-211ENST00000566872 SCN11AQ9UI33 1791 aa18.6■□□□□ 0.57
SCAMP5-211ENST00000566872 SOS1Q07889 1333 aaPredicted RBP18.59■□□□□ 0.57
SCAMP5-211ENST00000566872 RNMTO43148 476 aaKnown RBP18.59■□□□□ 0.57
SCAMP5-211ENST00000566872 DCTN1Q14203 1278 aa18.59■□□□□ 0.57
SCAMP5-211ENST00000566872 RCAN3Q9UKA8 241 aa18.59■□□□□ 0.57
SCAMP5-211ENST00000566872 KDM6AO15550 1401 aaPredicted RBP18.58■□□□□ 0.57
SCAMP5-211ENST00000566872 TAF7Q15545 349 aaPredicted RBP18.58■□□□□ 0.56
SCAMP5-211ENST00000566872 FAM182BQ5T319 152 aa18.58■□□□□ 0.56
SCAMP5-211ENST00000566872 MBIPQ9NS73 344 aa18.58■□□□□ 0.56
SCAMP5-211ENST00000566872 EN1Q05925 392 aaPredicted RBP18.57■□□□□ 0.56
SCAMP5-211ENST00000566872 SIPA1L3O60292 1781 aaPredicted RBP18.57■□□□□ 0.56
SCAMP5-211ENST00000566872 VIRMAQ69YN4 1812 aaKnown RBP18.56■□□□□ 0.56
SCAMP5-211ENST00000566872 ERVV-2B6SEH9 535 aa18.55■□□□□ 0.56
SCAMP5-211ENST00000566872 TSR2Q969E8 191 aaKnown RBP18.55■□□□□ 0.56
SCAMP5-211ENST00000566872 TEFQ10587 303 aa18.54■□□□□ 0.56
SCAMP5-211ENST00000566872 MPRIPQ6WCQ1 1025 aa18.54■□□□□ 0.56
SCAMP5-211ENST00000566872 LGR6Q9HBX8 967 aa18.54■□□□□ 0.56
SCAMP5-211ENST00000566872 USP35Q9P2H5 1018 aa18.54■□□□□ 0.56
SCAMP5-211ENST00000566872 KDM3BQ7LBC6 1761 aa18.53■□□□□ 0.56
SCAMP5-211ENST00000566872 EXOC5O00471 708 aa18.53■□□□□ 0.56
SCAMP5-211ENST00000566872 EXOSC9Q06265 439 aaKnown RBP18.53■□□□□ 0.56
SCAMP5-211ENST00000566872 SLC52A2Q9HAB3 445 aa18.53■□□□□ 0.56
SCAMP5-211ENST00000566872 TSPYL4Q9UJ04 414 aa18.53■□□□□ 0.56
SCAMP5-211ENST00000566872 HOXB7P09629 217 aa18.51■□□□□ 0.55
SCAMP5-211ENST00000566872 BRPF1P55201 1214 aaPredicted RBP18.51■□□□□ 0.55
SCAMP5-211ENST00000566872 CHMP4AQ9BY43 222 aa18.51■□□□□ 0.55
SCAMP5-211ENST00000566872 R3HDM1Q15032 1099 aaKnown RBP18.5■□□□□ 0.55
SCAMP5-211ENST00000566872 DDB1Q16531 1140 aa18.5■□□□□ 0.55
SCAMP5-211ENST00000566872 ALDH1L2Q3SY69 923 aa18.5■□□□□ 0.55
SCAMP5-211ENST00000566872 LAS1LQ9Y4W2 734 aaKnown RBP18.5■□□□□ 0.55
SCAMP5-211ENST00000566872 BCL9O00512 1426 aa18.49■□□□□ 0.55
SCAMP5-211ENST00000566872 RARSP54136 660 aaKnown RBP18.49■□□□□ 0.55
SCAMP5-211ENST00000566872 EZH2Q15910 746 aaKnown RBP18.49■□□□□ 0.55
SCAMP5-211ENST00000566872 SUPT16HQ9Y5B9 1047 aaKnown RBP18.49■□□□□ 0.55
SCAMP5-211ENST00000566872 HEG1Q9ULI3 1381 aa18.49■□□□□ 0.55
SCAMP5-211ENST00000566872 BTBD11A6QL63 1104 aa18.48■□□□□ 0.55
SCAMP5-211ENST00000566872 VAMP4O75379 141 aa18.48■□□□□ 0.55
SCAMP5-211ENST00000566872 RRP1P56182 461 aaKnown RBP18.47■□□□□ 0.55
SCAMP5-211ENST00000566872 TWISTNBQ3B726 338 aaPredicted RBP18.47■□□□□ 0.55
SCAMP5-211ENST00000566872 CAMKK2Q96RR4 588 aa18.47■□□□□ 0.55
SCAMP5-211ENST00000566872 TRIM37O94972 964 aa18.46■□□□□ 0.55
SCAMP5-211ENST00000566872 ERICH6BQ5W0A0 696 aa18.46■□□□□ 0.55
SCAMP5-211ENST00000566872 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.46■□□□□ 0.55
SCAMP5-211ENST00000566872 C8orf58Q8NAV2 365 aa18.46■□□□□ 0.55
SCAMP5-211ENST00000566872 DDX54Q8TDD1 881 aaKnown RBP18.46■□□□□ 0.55
SCAMP5-211ENST00000566872 RREB1Q92766 1687 aa18.46■□□□□ 0.55
SCAMP5-211ENST00000566872 TOGARAM1Q9Y4F4 1720 aa18.46■□□□□ 0.55
SCAMP5-211ENST00000566872 CABP4P57796 275 aa18.45■□□□□ 0.54
SCAMP5-211ENST00000566872 EIF4A1P60842 406 aaKnown RBP18.45■□□□□ 0.54
SCAMP5-211ENST00000566872 PAPPAQ13219 1627 aa18.45■□□□□ 0.54
SCAMP5-211ENST00000566872 NEFLP07196 543 aa18.44■□□□□ 0.54
SCAMP5-211ENST00000566872 ZNF790Q6PG37 636 aa18.44■□□□□ 0.54
SCAMP5-211ENST00000566872 FAM196AQ6ZSG2 479 aa18.44■□□□□ 0.54
SCAMP5-211ENST00000566872 NFATC2IPQ8NCF5 419 aa18.44■□□□□ 0.54
SCAMP5-211ENST00000566872 NUP188Q5SRE5 1749 aa18.43■□□□□ 0.54
SCAMP5-211ENST00000566872 TSPYL6Q8N831 410 aa18.43■□□□□ 0.54
SCAMP5-211ENST00000566872 MIS18AQ9NYP9 233 aa18.43■□□□□ 0.54
SCAMP5-211ENST00000566872 KIF16BQ96L93 1317 aa18.43■□□□□ 0.54
SCAMP5-211ENST00000566872 SSH1Q8WYL5 1049 aa18.42■□□□□ 0.54
SCAMP5-211ENST00000566872 CACNA1FO60840 1977 aa18.42■□□□□ 0.54
SCAMP5-211ENST00000566872 UBR2Q8IWV8 1755 aa18.41■□□□□ 0.54
SCAMP5-211ENST00000566872 MARCH10Q8NA82 808 aaPredicted RBP18.41■□□□□ 0.54
SCAMP5-211ENST00000566872 APBA3O96018 575 aa18.4■□□□□ 0.54
SCAMP5-211ENST00000566872 PDE3AQ14432 1141 aa18.4■□□□□ 0.54
SCAMP5-211ENST00000566872 ARHGAP45Q92619 1136 aa18.4■□□□□ 0.54
SCAMP5-211ENST00000566872 TMOD3Q9NYL9 352 aa18.4■□□□□ 0.54
SCAMP5-211ENST00000566872 BCAR3O75815 825 aa18.39■□□□□ 0.53
SCAMP5-211ENST00000566872 TTC5Q8N0Z6 440 aa18.39■□□□□ 0.53
SCAMP5-211ENST00000566872 SMC4Q9NTJ3 1288 aa18.39■□□□□ 0.53
SCAMP5-211ENST00000566872 ITGB4P16144 1822 aa18.39■□□□□ 0.53
SCAMP5-211ENST00000566872 IPO8O15397 1037 aaKnown RBP18.38■□□□□ 0.53
SCAMP5-211ENST00000566872 GIGYF1O75420 1035 aaPredicted RBP18.38■□□□□ 0.53
SCAMP5-211ENST00000566872 MS4A1P11836 297 aa18.38■□□□□ 0.53
SCAMP5-211ENST00000566872 CCDC30Q5VVM6 783 aa18.38■□□□□ 0.53
SCAMP5-211ENST00000566872 FMNL2Q96PY5 1086 aa18.38■□□□□ 0.53
SCAMP5-211ENST00000566872 KCPQ6ZWJ8 1503 aa18.38■□□□□ 0.53
SCAMP5-211ENST00000566872 DOT1LQ8TEK3 1739 aa18.37■□□□□ 0.53
SCAMP5-211ENST00000566872 KRT24Q2M2I5 525 aa18.37■□□□□ 0.53
SCAMP5-211ENST00000566872 MRPL50Q8N5N7 158 aaKnown RBP18.37■□□□□ 0.53
SCAMP5-211ENST00000566872 SBF2Q86WG5 1849 aa18.37■□□□□ 0.53
SCAMP5-211ENST00000566872 KCNQ3O43525 872 aa18.36■□□□□ 0.53
SCAMP5-211ENST00000566872 VSIG10Q8N0Z9 540 aa18.36■□□□□ 0.53
SCAMP5-211ENST00000566872 PIGBQ92521 554 aa18.36■□□□□ 0.53
SCAMP5-211ENST00000566872 ELL2O00472 640 aaPredicted RBP18.35■□□□□ 0.53
SCAMP5-211ENST00000566872 SNRPA1P09661 255 aaKnown RBP18.35■□□□□ 0.53
SCAMP5-211ENST00000566872 ZKSCAN2Q63HK3 967 aa18.35■□□□□ 0.53
SCAMP5-211ENST00000566872 ZNF496Q96IT1 587 aaPredicted RBP18.35■□□□□ 0.53
SCAMP5-211ENST00000566872 PTPRCP08575 1304 aa18.34■□□□□ 0.53
SCAMP5-211ENST00000566872 ERBB4Q15303 1308 aa18.34■□□□□ 0.53
SCAMP5-211ENST00000566872 HDGFL1Q5TGJ6 251 aa18.34■□□□□ 0.53
SCAMP5-211ENST00000566872 STK31Q9BXU1 1019 aa18.34■□□□□ 0.53
SCAMP5-211ENST00000566872 CICQ96RK0 1608 aaPredicted RBP18.34■□□□□ 0.53
SCAMP5-211ENST00000566872 LAMB4A4D0S4 1761 aa18.33■□□□□ 0.53
SCAMP5-211ENST00000566872 SLC39A6Q13433 755 aa18.33■□□□□ 0.52
SCAMP5-211ENST00000566872 ATF7IPQ6VMQ6 1270 aa18.33■□□□□ 0.52
SCAMP5-211ENST00000566872 GTF3C3Q9Y5Q9 886 aa18.33■□□□□ 0.52
SCAMP5-211ENST00000566872 AAMPQ13685 434 aa18.32■□□□□ 0.52
SCAMP5-211ENST00000566872 TEX13AQ9BXU3 409 aaPredicted RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms