RNA–Protein interactions for RNA: ENST00000566818.1

IFT140-208, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 722 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-208ENST00000566818 ATG3Q9NT62 314 aa25.33■■□□□ 1.65
IFT140-208ENST00000566818 COL3A1P02461 1466 aaPredicted RBP25.32■■□□□ 1.64
IFT140-208ENST00000566818 HMOX1P09601 288 aa25.31■■□□□ 1.64
IFT140-208ENST00000566818 ATP6V1AP38606 617 aa25.31■■□□□ 1.64
IFT140-208ENST00000566818 ZNF831Q5JPB2 1677 aa25.31■■□□□ 1.64
IFT140-208ENST00000566818 UBR3Q6ZT12 1888 aa25.3■■□□□ 1.64
IFT140-208ENST00000566818 AKAP4Q5JQC9 854 aa25.3■■□□□ 1.64
IFT140-208ENST00000566818 LINC00116Q8NCU8 138 aa25.29■■□□□ 1.64
IFT140-208ENST00000566818 SCN11AQ9UI33 1791 aa25.28■■□□□ 1.64
IFT140-208ENST00000566818 SSFA2P28290 1259 aa25.28■■□□□ 1.64
IFT140-208ENST00000566818 KLHL34Q8N239 644 aa25.28■■□□□ 1.64
IFT140-208ENST00000566818 CFAP53Q96M91 514 aa25.28■■□□□ 1.64
IFT140-208ENST00000566818 PHF14O94880 888 aa25.27■■□□□ 1.64
IFT140-208ENST00000566818 ITPK1Q13572 414 aa25.27■■□□□ 1.64
IFT140-208ENST00000566818 RBM42Q9BTD8 480 aaKnown RBP25.27■■□□□ 1.64
IFT140-208ENST00000566818 MSL1Q68DK7 614 aa25.26■■□□□ 1.63
IFT140-208ENST00000566818 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.25■■□□□ 1.63
IFT140-208ENST00000566818 U2SURPO15042 1029 aaKnown RBP25.25■■□□□ 1.63
IFT140-208ENST00000566818 GNPATO15228 680 aa25.25■■□□□ 1.63
IFT140-208ENST00000566818 MRC1P22897 1456 aa25.23■■□□□ 1.63
IFT140-208ENST00000566818 NFATC2IPQ8NCF5 419 aa25.23■■□□□ 1.63
IFT140-208ENST00000566818 COL5A3P25940 1745 aaPredicted RBP25.23■■□□□ 1.63
IFT140-208ENST00000566818 YY1P25490 414 aa25.21■■□□□ 1.63
IFT140-208ENST00000566818 CNTNAP4Q9C0A0 1308 aa25.2■■□□□ 1.62
IFT140-208ENST00000566818 MTHFSDQ2M296 383 aaKnown RBP25.2■■□□□ 1.62
IFT140-208ENST00000566818 AMIGO3Q86WK7 504 aa25.2■■□□□ 1.62
IFT140-208ENST00000566818 SLC52A2Q9HAB3 445 aa25.2■■□□□ 1.62
IFT140-208ENST00000566818 CICQ96RK0 1608 aaPredicted RBP25.19■■□□□ 1.62
IFT140-208ENST00000566818 RNMTO43148 476 aaKnown RBP25.19■■□□□ 1.62
IFT140-208ENST00000566818 SLC4A9Q96Q91 983 aa25.19■■□□□ 1.62
IFT140-208ENST00000566818 NUDCQ9Y266 331 aa25.19■■□□□ 1.62
IFT140-208ENST00000566818 RTCBQ9Y3I0 505 aaKnown RBP25.19■■□□□ 1.62
IFT140-208ENST00000566818 ADAMTS7Q9UKP4 1686 aa25.19■■□□□ 1.62
IFT140-208ENST00000566818 VIRMAQ69YN4 1812 aaKnown RBP25.19■■□□□ 1.62
IFT140-208ENST00000566818 PTCD1O75127 700 aaKnown RBP25.18■■□□□ 1.62
IFT140-208ENST00000566818 RC3H1Q5TC82 1133 aaKnown RBP25.18■■□□□ 1.62
IFT140-208ENST00000566818 GAS2L2Q8NHY3 880 aa25.18■■□□□ 1.62
IFT140-208ENST00000566818 PPP2R1AP30153 589 aa25.17■■□□□ 1.62
IFT140-208ENST00000566818 ADRA2BP18089 450 aa25.16■■□□□ 1.62
IFT140-208ENST00000566818 SMIM5Q71RC9 77 aa25.16■■□□□ 1.62
IFT140-208ENST00000566818 LGR6Q9HBX8 967 aa25.16■■□□□ 1.62
IFT140-208ENST00000566818 TJP1Q07157 1748 aa25.15■■□□□ 1.62
IFT140-208ENST00000566818 GPR162Q16538 588 aa25.14■■□□□ 1.62
IFT140-208ENST00000566818 TRAPPC3LQ5T215 181 aa25.14■■□□□ 1.62
IFT140-208ENST00000566818 NLGN2Q8NFZ4 835 aa25.13■■□□□ 1.61
IFT140-208ENST00000566818 CD2APQ9Y5K6 639 aa25.13■■□□□ 1.61
IFT140-208ENST00000566818 GNAT3A8MTJ3 354 aa25.11■■□□□ 1.61
IFT140-208ENST00000566818 RPS6KA4O75676 772 aa25.11■■□□□ 1.61
IFT140-208ENST00000566818 PELP1Q8IZL8 1130 aaKnown RBP25.11■■□□□ 1.61
IFT140-208ENST00000566818 PRKAR2BP31323 418 aa25.1■■□□□ 1.61
IFT140-208ENST00000566818 CRKLP46109 303 aaKnown RBP25.1■■□□□ 1.61
IFT140-208ENST00000566818 KCPQ6ZWJ8 1503 aa25.09■■□□□ 1.61
IFT140-208ENST00000566818 U2AF1L5P0DN76 240 aaPredicted RBP25.09■■□□□ 1.61
IFT140-208ENST00000566818 RFC4P35249 363 aa25.09■■□□□ 1.61
IFT140-208ENST00000566818 U2AF1Q01081 240 aaKnown RBP eCLIP25.09■■□□□ 1.61
IFT140-208ENST00000566818 TEFQ10587 303 aa25.09■■□□□ 1.61
IFT140-208ENST00000566818 RSPH6AQ9H0K4 717 aa25.09■■□□□ 1.61
IFT140-208ENST00000566818 MYH14Q7Z406 1995 aaKnown RBP25.08■■□□□ 1.61
IFT140-208ENST00000566818 ARHGEF1Q92888 912 aaKnown RBP25.08■■□□□ 1.61
IFT140-208ENST00000566818 C4AP0C0L4 1744 aa25.08■■□□□ 1.61
IFT140-208ENST00000566818 SLC39A6Q13433 755 aa25.07■■□□□ 1.6
IFT140-208ENST00000566818 TTC5Q8N0Z6 440 aa25.07■■□□□ 1.6
IFT140-208ENST00000566818 NLGN1Q8N2Q7 840 aa25.07■■□□□ 1.6
IFT140-208ENST00000566818 CHD4Q14839 1912 aa25.07■■□□□ 1.6
IFT140-208ENST00000566818 UBR2Q8IWV8 1755 aa25.06■■□□□ 1.6
IFT140-208ENST00000566818 MMP10P09238 476 aa25.05■■□□□ 1.6
IFT140-208ENST00000566818 DNAJC10Q8IXB1 793 aa25.05■■□□□ 1.6
IFT140-208ENST00000566818 FCHSD2O94868 740 aa25.04■■□□□ 1.6
IFT140-208ENST00000566818 VSIG10Q8N0Z9 540 aa25.04■■□□□ 1.6
IFT140-208ENST00000566818 CCDC87Q9NVE4 849 aa25.04■■□□□ 1.6
IFT140-208ENST00000566818 SIPA1L3O60292 1781 aaPredicted RBP25.03■■□□□ 1.6
IFT140-208ENST00000566818 PHACTR3Q96KR7 559 aa25.03■■□□□ 1.6
IFT140-208ENST00000566818 GRIN3BO60391 1043 aa25.02■■□□□ 1.6
IFT140-208ENST00000566818 GYS1P13807 737 aa25.02■■□□□ 1.6
IFT140-208ENST00000566818 IL17REQ8NFR9 667 aa25.02■■□□□ 1.6
IFT140-208ENST00000566818 CEMIPQ8WUJ3 1361 aa25.02■■□□□ 1.6
IFT140-208ENST00000566818 INTS5Q6P9B9 1019 aaKnown RBP25.01■■□□□ 1.59
IFT140-208ENST00000566818 NEFMP07197 916 aa25■■□□□ 1.59
IFT140-208ENST00000566818 CYP19A1P11511 503 aaPredicted RBP25■■□□□ 1.59
IFT140-208ENST00000566818 RTF1Q92541 710 aaKnown RBP25■■□□□ 1.59
IFT140-208ENST00000566818 USP42Q9H9J4 1324 aaKnown RBP25■■□□□ 1.59
IFT140-208ENST00000566818 UTRNP46939 3433 aa24.99■■□□□ 1.59
IFT140-208ENST00000566818 SOS1Q07889 1333 aaPredicted RBP24.98■■□□□ 1.59
IFT140-208ENST00000566818 YBX3P16989 372 aaKnown RBP eCLIP24.98■■□□□ 1.59
IFT140-208ENST00000566818 ZNF790Q6PG37 636 aa24.98■■□□□ 1.59
IFT140-208ENST00000566818 PARP3Q9Y6F1 533 aa24.98■■□□□ 1.59
IFT140-208ENST00000566818 KIF13BQ9NQT8 1826 aa24.97■■□□□ 1.59
IFT140-208ENST00000566818 C10orf71Q711Q0 1435 aa24.96■■□□□ 1.59
IFT140-208ENST00000566818 COL15A1P39059 1388 aa24.96■■□□□ 1.59
IFT140-208ENST00000566818 ZPR1O75312 459 aa24.96■■□□□ 1.59
IFT140-208ENST00000566818 STARD3NLO95772 234 aa24.96■■□□□ 1.59
IFT140-208ENST00000566818 RALBP1Q15311 655 aa24.96■■□□□ 1.59
IFT140-208ENST00000566818 SRP68Q9UHB9 627 aaKnown RBP24.96■■□□□ 1.59
IFT140-208ENST00000566818 HEG1Q9ULI3 1381 aa24.95■■□□□ 1.59
IFT140-208ENST00000566818 TEX13AQ9BXU3 409 aaPredicted RBP24.95■■□□□ 1.58
IFT140-208ENST00000566818 ZBTB1Q9Y2K1 713 aa24.95■■□□□ 1.58
IFT140-208ENST00000566818 BTBD11A6QL63 1104 aa24.94■■□□□ 1.58
IFT140-208ENST00000566818 ZNF496Q96IT1 587 aaPredicted RBP24.94■■□□□ 1.58
IFT140-208ENST00000566818 FMNL2Q96PY5 1086 aa24.94■■□□□ 1.58
IFT140-208ENST00000566818 HTATSF1O43719 755 aaKnown RBP24.93■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms