RNA–Protein interactions for RNA: ENST00000566581.5

LPCAT4-206, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 1 (best)

Gene LPCAT4, Length 915 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-206ENST00000566581 FLAD1Q8NFF5 587 aa17.01■□□□□ 0.31
LPCAT4-206ENST00000566581 COL23A1Q86Y22 540 aaPredicted RBP16.99■□□□□ 0.31
LPCAT4-206ENST00000566581 NFATC2IPQ8NCF5 419 aa16.99■□□□□ 0.31
LPCAT4-206ENST00000566581 ADAMTS7Q9UKP4 1686 aa16.99■□□□□ 0.31
LPCAT4-206ENST00000566581 MYH14Q7Z406 1995 aaKnown RBP16.98■□□□□ 0.31
LPCAT4-206ENST00000566581 U2SURPO15042 1029 aaKnown RBP16.98■□□□□ 0.31
LPCAT4-206ENST00000566581 ATP6V1AP38606 617 aa16.98■□□□□ 0.31
LPCAT4-206ENST00000566581 MTHFSDQ2M296 383 aaKnown RBP16.98■□□□□ 0.31
LPCAT4-206ENST00000566581 COL5A3P25940 1745 aaPredicted RBP16.97■□□□□ 0.31
LPCAT4-206ENST00000566581 ITPK1Q13572 414 aa16.97■□□□□ 0.31
LPCAT4-206ENST00000566581 ARXQ96QS3 562 aa16.97■□□□□ 0.31
LPCAT4-206ENST00000566581 NUDCQ9Y266 331 aa16.97■□□□□ 0.31
LPCAT4-206ENST00000566581 RNMTO43148 476 aaKnown RBP16.96■□□□□ 0.31
LPCAT4-206ENST00000566581 LINC00116Q8NCU8 138 aa16.96■□□□□ 0.31
LPCAT4-206ENST00000566581 AK7Q96M32 723 aa16.96■□□□□ 0.31
LPCAT4-206ENST00000566581 SLC52A2Q9HAB3 445 aa16.96■□□□□ 0.31
LPCAT4-206ENST00000566581 LGR6Q9HBX8 967 aa16.96■□□□□ 0.31
LPCAT4-206ENST00000566581 MRC1P22897 1456 aa16.95■□□□□ 0.3
LPCAT4-206ENST00000566581 MAP3K5Q99683 1374 aa16.95■□□□□ 0.3
LPCAT4-206ENST00000566581 POLD1P28340 1107 aa16.95■□□□□ 0.3
LPCAT4-206ENST00000566581 SLC4A9Q96Q91 983 aa16.95■□□□□ 0.3
LPCAT4-206ENST00000566581 SSFA2P28290 1259 aa16.94■□□□□ 0.3
LPCAT4-206ENST00000566581 RC3H1Q5TC82 1133 aaKnown RBP16.94■□□□□ 0.3
LPCAT4-206ENST00000566581 GAS2L2Q8NHY3 880 aa16.94■□□□□ 0.3
LPCAT4-206ENST00000566581 SYT17Q9BSW7 474 aa16.94■□□□□ 0.3
LPCAT4-206ENST00000566581 RBM42Q9BTD8 480 aaKnown RBP16.94■□□□□ 0.3
LPCAT4-206ENST00000566581 FHDC1Q9C0D6 1143 aaPredicted RBP16.94■□□□□ 0.3
LPCAT4-206ENST00000566581 CICQ96RK0 1608 aaPredicted RBP16.94■□□□□ 0.3
LPCAT4-206ENST00000566581 MSH5O43196 834 aa16.93■□□□□ 0.3
LPCAT4-206ENST00000566581 FCHSD2O94868 740 aa16.93■□□□□ 0.3
LPCAT4-206ENST00000566581 RSPH6AQ9H0K4 717 aa16.93■□□□□ 0.3
LPCAT4-206ENST00000566581 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.92■□□□□ 0.3
LPCAT4-206ENST00000566581 AMIGO3Q86WK7 504 aa16.92■□□□□ 0.3
LPCAT4-206ENST00000566581 GNAT3A8MTJ3 354 aa16.91■□□□□ 0.3
LPCAT4-206ENST00000566581 PTCD1O75127 700 aaKnown RBP16.91■□□□□ 0.3
LPCAT4-206ENST00000566581 U2AF1L5P0DN76 240 aaPredicted RBP16.91■□□□□ 0.3
LPCAT4-206ENST00000566581 PRKAR2BP31323 418 aa16.91■□□□□ 0.3
LPCAT4-206ENST00000566581 U2AF1Q01081 240 aaKnown RBP eCLIP16.91■□□□□ 0.3
LPCAT4-206ENST00000566581 SIPA1L3O60292 1781 aaPredicted RBP16.91■□□□□ 0.3
LPCAT4-206ENST00000566581 DCAF8L1A6NGE4 600 aa16.9■□□□□ 0.3
LPCAT4-206ENST00000566581 GNPATO15228 680 aa16.9■□□□□ 0.3
LPCAT4-206ENST00000566581 DDX10Q13206 875 aaKnown RBP16.9■□□□□ 0.3
LPCAT4-206ENST00000566581 PHACTR3Q96KR7 559 aa16.9■□□□□ 0.3
LPCAT4-206ENST00000566581 CNTNAP4Q9C0A0 1308 aa16.9■□□□□ 0.3
LPCAT4-206ENST00000566581 GOLGB1Q14789 3259 aaKnown RBP16.9■□□□□ 0.3
LPCAT4-206ENST00000566581 UBR2Q8IWV8 1755 aa16.89■□□□□ 0.3
LPCAT4-206ENST00000566581 UTRNP46939 3433 aa16.89■□□□□ 0.29
LPCAT4-206ENST00000566581 ZEB1P37275 1124 aaPredicted RBP16.89■□□□□ 0.29
LPCAT4-206ENST00000566581 RALBP1Q15311 655 aa16.89■□□□□ 0.29
LPCAT4-206ENST00000566581 IL17REQ8NFR9 667 aa16.89■□□□□ 0.29
LPCAT4-206ENST00000566581 RTCBQ9Y3I0 505 aaKnown RBP16.89■□□□□ 0.29
LPCAT4-206ENST00000566581 TJP1Q07157 1748 aa16.89■□□□□ 0.29
LPCAT4-206ENST00000566581 CHD4Q14839 1912 aa16.88■□□□□ 0.29
LPCAT4-206ENST00000566581 PHF14O94880 888 aa16.88■□□□□ 0.29
LPCAT4-206ENST00000566581 ADRA2BP18089 450 aa16.88■□□□□ 0.29
LPCAT4-206ENST00000566581 RPS6KA4O75676 772 aa16.87■□□□□ 0.29
LPCAT4-206ENST00000566581 TRAPPC3LQ5T215 181 aa16.87■□□□□ 0.29
LPCAT4-206ENST00000566581 SMIM5Q71RC9 77 aa16.87■□□□□ 0.29
LPCAT4-206ENST00000566581 DLG5Q8TDM6 1919 aa16.87■□□□□ 0.29
LPCAT4-206ENST00000566581 CEMIPQ8WUJ3 1361 aa16.87■□□□□ 0.29
LPCAT4-206ENST00000566581 SLC39A6Q13433 755 aa16.86■□□□□ 0.29
LPCAT4-206ENST00000566581 MSL1Q68DK7 614 aa16.86■□□□□ 0.29
LPCAT4-206ENST00000566581 CRKLP46109 303 aaKnown RBP16.85■□□□□ 0.29
LPCAT4-206ENST00000566581 TEFQ10587 303 aa16.85■□□□□ 0.29
LPCAT4-206ENST00000566581 VSIG10Q8N0Z9 540 aa16.85■□□□□ 0.29
LPCAT4-206ENST00000566581 KCPQ6ZWJ8 1503 aa16.85■□□□□ 0.29
LPCAT4-206ENST00000566581 C4AP0C0L4 1744 aa16.84■□□□□ 0.29
LPCAT4-206ENST00000566581 ARHGEF1Q92888 912 aaKnown RBP16.84■□□□□ 0.29
LPCAT4-206ENST00000566581 HTATSF1O43719 755 aaKnown RBP16.83■□□□□ 0.28
LPCAT4-206ENST00000566581 INTS5Q6P9B9 1019 aaKnown RBP16.82■□□□□ 0.28
LPCAT4-206ENST00000566581 ZNF790Q6PG37 636 aa16.82■□□□□ 0.28
LPCAT4-206ENST00000566581 DNAJC10Q8IXB1 793 aa16.82■□□□□ 0.28
LPCAT4-206ENST00000566581 NLGN1Q8N2Q7 840 aa16.82■□□□□ 0.28
LPCAT4-206ENST00000566581 CD2APQ9Y5K6 639 aa16.82■□□□□ 0.28
LPCAT4-206ENST00000566581 CYP19A1P11511 503 aaPredicted RBP16.81■□□□□ 0.28
LPCAT4-206ENST00000566581 RFC4P35249 363 aa16.81■□□□□ 0.28
LPCAT4-206ENST00000566581 TTC5Q8N0Z6 440 aa16.81■□□□□ 0.28
LPCAT4-206ENST00000566581 RTF1Q92541 710 aaKnown RBP16.81■□□□□ 0.28
LPCAT4-206ENST00000566581 PNNQ9H307 717 aaKnown RBP16.81■□□□□ 0.28
LPCAT4-206ENST00000566581 CCDC87Q9NVE4 849 aa16.81■□□□□ 0.28
LPCAT4-206ENST00000566581 KIF13BQ9NQT8 1826 aa16.8■□□□□ 0.28
LPCAT4-206ENST00000566581 NEFMP07197 916 aa16.8■□□□□ 0.28
LPCAT4-206ENST00000566581 KLHL34Q8N239 644 aa16.8■□□□□ 0.28
LPCAT4-206ENST00000566581 PLEKHF1Q96S99 279 aa16.8■□□□□ 0.28
LPCAT4-206ENST00000566581 MYBBP1AQ9BQG0 1328 aaKnown RBP16.79■□□□□ 0.28
LPCAT4-206ENST00000566581 GYS1P13807 737 aa16.79■□□□□ 0.28
LPCAT4-206ENST00000566581 ZNF496Q96IT1 587 aaPredicted RBP16.79■□□□□ 0.28
LPCAT4-206ENST00000566581 TEX13AQ9BXU3 409 aaPredicted RBP16.79■□□□□ 0.28
LPCAT4-206ENST00000566581 STARD3NLO95772 234 aa16.78■□□□□ 0.28
LPCAT4-206ENST00000566581 NLGN2Q8NFZ4 835 aa16.78■□□□□ 0.28
LPCAT4-206ENST00000566581 HEG1Q9ULI3 1381 aa16.77■□□□□ 0.28
LPCAT4-206ENST00000566581 BTBD11A6QL63 1104 aa16.77■□□□□ 0.28
LPCAT4-206ENST00000566581 MMP10P09238 476 aa16.77■□□□□ 0.28
LPCAT4-206ENST00000566581 MCM10Q7L590 875 aa16.77■□□□□ 0.28
LPCAT4-206ENST00000566581 SOS1Q07889 1333 aaPredicted RBP16.76■□□□□ 0.27
LPCAT4-206ENST00000566581 USP42Q9H9J4 1324 aaKnown RBP16.76■□□□□ 0.27
LPCAT4-206ENST00000566581 FMNL2Q96PY5 1086 aa16.76■□□□□ 0.27
LPCAT4-206ENST00000566581 NFE2L2Q16236 605 aa16.75■□□□□ 0.27
LPCAT4-206ENST00000566581 GPR162Q16538 588 aa16.75■□□□□ 0.27
LPCAT4-206ENST00000566581 PRKRIP1Q9H875 184 aaPredicted RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms