RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 CNTNAP5Q8WYK1 1306 aa5.03□□□□□ -1.6
HERPUD1-211ENST00000566550 LILRB3O75022 631 aa5.03□□□□□ -1.6
HERPUD1-211ENST00000566550 BCRP11274 1271 aa5.03□□□□□ -1.6
HERPUD1-211ENST00000566550 CTSOP43234 321 aaPredicted RBP5.03□□□□□ -1.6
HERPUD1-211ENST00000566550 RELBQ01201 579 aa5.03□□□□□ -1.6
HERPUD1-211ENST00000566550 SH3BP5LQ7L8J4 393 aa5.03□□□□□ -1.6
HERPUD1-211ENST00000566550 HELBQ8NG08 1087 aaPredicted RBP5.03□□□□□ -1.6
HERPUD1-211ENST00000566550 MBIPQ9NS73 344 aa5.03□□□□□ -1.6
HERPUD1-211ENST00000566550 IGSF5Q9NSI5 407 aa5.03□□□□□ -1.6
HERPUD1-211ENST00000566550 GNEQ9Y223 722 aaKnown RBP5.03□□□□□ -1.6
HERPUD1-211ENST00000566550 MAFBQ9Y5Q3 323 aaPredicted RBP5.03□□□□□ -1.6
HERPUD1-211ENST00000566550 ALYREFQ86V81 257 aaKnown RBP5.02□□□□□ -1.61
HERPUD1-211ENST00000566550 GIPC2Q8TF65 315 aa5.02□□□□□ -1.61
HERPUD1-211ENST00000566550 SLC10A4Q96EP9 437 aa5.02□□□□□ -1.61
HERPUD1-211ENST00000566550 PSMG3-AS1Q96PY0 264 aa5.02□□□□□ -1.61
HERPUD1-211ENST00000566550 KCTD15Q96SI1 283 aaPredicted RBP5.02□□□□□ -1.61
HERPUD1-211ENST00000566550 INSM2Q96T92 566 aaPredicted RBP5.02□□□□□ -1.61
HERPUD1-211ENST00000566550 PPP1R1BQ9UD71 204 aaPredicted RBP5.02□□□□□ -1.61
HERPUD1-211ENST00000566550 TCF3P15923 654 aa5.01□□□□□ -1.61
HERPUD1-211ENST00000566550 ZNF16P17020 682 aaPredicted RBP5.01□□□□□ -1.61
HERPUD1-211ENST00000566550 SEMA3FQ13275 785 aa5.01□□□□□ -1.61
HERPUD1-211ENST00000566550 TUSC1Q2TAM9 212 aa5.01□□□□□ -1.61
HERPUD1-211ENST00000566550 ERFEQ4G0M1 354 aa5.01□□□□□ -1.61
HERPUD1-211ENST00000566550 TBC1D9Q6ZT07 1266 aa5.01□□□□□ -1.61
HERPUD1-211ENST00000566550 ZBTB33Q86T24 672 aa5.01□□□□□ -1.61
HERPUD1-211ENST00000566550 TXNDC2Q86VQ3 553 aa5.01□□□□□ -1.61
HERPUD1-211ENST00000566550 Q8N3U1 123 aa5.01□□□□□ -1.61
HERPUD1-211ENST00000566550 RNF217Q8TC41 542 aa5.01□□□□□ -1.61
HERPUD1-211ENST00000566550 STK32AQ8WU08 396 aa5.01□□□□□ -1.61
HERPUD1-211ENST00000566550 TRERF1Q96PN7 1200 aa5.01□□□□□ -1.61
HERPUD1-211ENST00000566550 ALG2Q9H553 416 aa5.01□□□□□ -1.61
HERPUD1-211ENST00000566550 LRRC4BQ9NT99 713 aa5.01□□□□□ -1.61
HERPUD1-211ENST00000566550 BIN2Q9UBW5 565 aaPredicted RBP5.01□□□□□ -1.61
HERPUD1-211ENST00000566550 H7C1W4 665 aa5□□□□□ -1.61
HERPUD1-211ENST00000566550 PER1O15534 1290 aaPredicted RBP5□□□□□ -1.61
HERPUD1-211ENST00000566550 GPR37L1O60883 481 aa5□□□□□ -1.61
HERPUD1-211ENST00000566550 PROCP04070 461 aa5□□□□□ -1.61
HERPUD1-211ENST00000566550 CTDSPL2Q05D32 466 aa5□□□□□ -1.61
HERPUD1-211ENST00000566550 TMEM164Q5U3C3 297 aa5□□□□□ -1.61
HERPUD1-211ENST00000566550 DNAJC14Q6Y2X3 702 aaPredicted RBP5□□□□□ -1.61
HERPUD1-211ENST00000566550 LYSMD3Q7Z3D4 306 aa5□□□□□ -1.61
HERPUD1-211ENST00000566550 LRRN4Q8WUT4 740 aa5□□□□□ -1.61
HERPUD1-211ENST00000566550 AGBL1Q96MI9 1066 aa5□□□□□ -1.61
HERPUD1-211ENST00000566550 ARHGAP9Q9BRR9 750 aa5□□□□□ -1.61
HERPUD1-211ENST00000566550 POLR3GLQ9BT43 218 aa5□□□□□ -1.61
HERPUD1-211ENST00000566550 TRIM34Q9BYJ4 488 aa5□□□□□ -1.61
HERPUD1-211ENST00000566550 KRTAP4-8Q9BYQ9 185 aa5□□□□□ -1.61
HERPUD1-211ENST00000566550 IGF1RP08069 1367 aa5□□□□□ -1.61
HERPUD1-211ENST00000566550 SMARCA5O60264 1052 aaPredicted RBP4.99□□□□□ -1.61
HERPUD1-211ENST00000566550 BAG6P46379 1132 aa4.99□□□□□ -1.61
HERPUD1-211ENST00000566550 CCDC125Q86Z20 511 aa4.99□□□□□ -1.61
HERPUD1-211ENST00000566550 ZNF395Q9H8N7 513 aaPredicted RBP4.99□□□□□ -1.61
HERPUD1-211ENST00000566550 ZMIZ1Q9ULJ6 1067 aa4.99□□□□□ -1.61
HERPUD1-211ENST00000566550 TTBK1Q5TCY1 1321 aaPredicted RBP4.98□□□□□ -1.61
HERPUD1-211ENST00000566550 PIK3R2O00459 728 aa4.98□□□□□ -1.61
HERPUD1-211ENST00000566550 SERPINB4P48594 390 aa4.98□□□□□ -1.61
HERPUD1-211ENST00000566550 GAS6Q14393 721 aa4.98□□□□□ -1.61
HERPUD1-211ENST00000566550 PDXDC2PQ6P474 469 aa4.98□□□□□ -1.61
HERPUD1-211ENST00000566550 TRIM22Q8IYM9 498 aa4.98□□□□□ -1.61
HERPUD1-211ENST00000566550 EPS8L1Q8TE68 723 aa4.98□□□□□ -1.61
HERPUD1-211ENST00000566550 SREK1Q8WXA9 508 aaKnown RBP4.98□□□□□ -1.61
HERPUD1-211ENST00000566550 DRC1Q96MC2 740 aa4.98□□□□□ -1.61
HERPUD1-211ENST00000566550 NOVA2Q9UNW9 492 aaKnown RBP4.98□□□□□ -1.61
HERPUD1-211ENST00000566550 SENP3-EIF4A1A0A087X0R7 540 aa4.97□□□□□ -1.61
HERPUD1-211ENST00000566550 ATP9BO43861 1147 aa4.97□□□□□ -1.61
HERPUD1-211ENST00000566550 ERCC3P19447 782 aa4.97□□□□□ -1.61
HERPUD1-211ENST00000566550 RIPOR1Q6ZS17 1223 aa4.97□□□□□ -1.61
HERPUD1-211ENST00000566550 MKL2Q9ULH7 1088 aa4.97□□□□□ -1.61
HERPUD1-211ENST00000566550 SOWAHDA6NJG2 315 aa4.96□□□□□ -1.62
HERPUD1-211ENST00000566550 ADH1AP07327 375 aa4.96□□□□□ -1.62
HERPUD1-211ENST00000566550 ARID4AP29374 1257 aaPredicted RBP4.96□□□□□ -1.62
HERPUD1-211ENST00000566550 SOX11P35716 441 aa4.96□□□□□ -1.62
HERPUD1-211ENST00000566550 PTGIRP43119 386 aa4.96□□□□□ -1.62
HERPUD1-211ENST00000566550 PTK2Q05397 1052 aa4.96□□□□□ -1.62
HERPUD1-211ENST00000566550 NBPF20Q3BBV1 942 aa4.96□□□□□ -1.62
HERPUD1-211ENST00000566550 PHLDB3Q6NSJ2 640 aa4.96□□□□□ -1.62
HERPUD1-211ENST00000566550 SIRT1Q96EB6 747 aa4.96□□□□□ -1.62
HERPUD1-211ENST00000566550 ANKRD33BA6NCL7 494 aa4.95□□□□□ -1.62
HERPUD1-211ENST00000566550 PIK3CDO00329 1044 aa4.95□□□□□ -1.62
HERPUD1-211ENST00000566550 ITGB2P05107 769 aa4.95□□□□□ -1.62
HERPUD1-211ENST00000566550 FURINP09958 794 aa4.95□□□□□ -1.62
HERPUD1-211ENST00000566550 MX2P20592 715 aa4.95□□□□□ -1.62
HERPUD1-211ENST00000566550 NOM1Q5C9Z4 860 aaKnown RBP4.95□□□□□ -1.62
HERPUD1-211ENST00000566550 INTS6LQ5JSJ4 861 aaKnown RBP4.95□□□□□ -1.62
HERPUD1-211ENST00000566550 PRICKLE2Q7Z3G6 844 aa4.95□□□□□ -1.62
HERPUD1-211ENST00000566550 PNMA1Q8ND90 353 aa4.95□□□□□ -1.62
HERPUD1-211ENST00000566550 ZNF837Q96EG3 531 aaPredicted RBP4.95□□□□□ -1.62
HERPUD1-211ENST00000566550 ZC3H4Q9UPT8 1303 aaKnown RBP4.95□□□□□ -1.62
HERPUD1-211ENST00000566550 GPR25O00155 361 aa4.94□□□□□ -1.62
HERPUD1-211ENST00000566550 OIP5O43482 229 aa4.94□□□□□ -1.62
HERPUD1-211ENST00000566550 MAP2K3P46734 347 aa4.94□□□□□ -1.62
HERPUD1-211ENST00000566550 EIF4G2P78344 907 aaKnown RBP eCLIP4.94□□□□□ -1.62
HERPUD1-211ENST00000566550 ZNF326Q5BKZ1 582 aaKnown RBP4.94□□□□□ -1.62
HERPUD1-211ENST00000566550 KANK4Q5T7N3 995 aaPredicted RBP4.94□□□□□ -1.62
HERPUD1-211ENST00000566550 DEPDC4Q8N2C3 294 aa4.94□□□□□ -1.62
HERPUD1-211ENST00000566550 ACDQ96AP0 544 aa4.94□□□□□ -1.62
HERPUD1-211ENST00000566550 CUEDC1Q9NWM3 386 aaPredicted RBP4.94□□□□□ -1.62
HERPUD1-211ENST00000566550 USP17L3A6NCW0 530 aa4.93□□□□□ -1.62
HERPUD1-211ENST00000566550 USP17L4A6NCW7 530 aa4.93□□□□□ -1.62
HERPUD1-211ENST00000566550 SKIP12755 728 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms