RNA–Protein interactions for RNA: ENST00000566371.5

SPG7-214, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-214ENST00000566371 MRC1P22897 1456 aa28.96■■■□□ 2.23
SPG7-214ENST00000566371 DDX10Q13206 875 aaKnown RBP28.95■■■□□ 2.22
SPG7-214ENST00000566371 ATF5Q9Y2D1 282 aaPredicted RBP28.95■■■□□ 2.22
SPG7-214ENST00000566371 NFATC2IPQ8NCF5 419 aa28.94■■■□□ 2.22
SPG7-214ENST00000566371 VIRMAQ69YN4 1812 aaKnown RBP28.93■■■□□ 2.22
SPG7-214ENST00000566371 SGIP1Q9BQI5 828 aa28.93■■■□□ 2.22
SPG7-214ENST00000566371 RSPH6AQ9H0K4 717 aa28.93■■■□□ 2.22
SPG7-214ENST00000566371 COL24A1Q17RW2 1714 aa28.93■■■□□ 2.22
SPG7-214ENST00000566371 ATP6V1AP38606 617 aa28.92■■■□□ 2.22
SPG7-214ENST00000566371 RALBP1Q15311 655 aa28.92■■■□□ 2.22
SPG7-214ENST00000566371 GAS2L2Q8NHY3 880 aa28.92■■■□□ 2.22
SPG7-214ENST00000566371 RNMTO43148 476 aaKnown RBP28.91■■■□□ 2.22
SPG7-214ENST00000566371 FLAD1Q8NFF5 587 aa28.91■■■□□ 2.22
SPG7-214ENST00000566371 SLC52A2Q9HAB3 445 aa28.91■■■□□ 2.22
SPG7-214ENST00000566371 U2AF1L5P0DN76 240 aaPredicted RBP28.9■■■□□ 2.22
SPG7-214ENST00000566371 PRKAR2BP31323 418 aa28.9■■■□□ 2.22
SPG7-214ENST00000566371 U2AF1Q01081 240 aaKnown RBP eCLIP28.9■■■□□ 2.221e-21■■□□□ 12.5
SPG7-214ENST00000566371 ITPK1Q13572 414 aa28.9■■■□□ 2.22
SPG7-214ENST00000566371 LINC00116Q8NCU8 138 aa28.9■■■□□ 2.22
SPG7-214ENST00000566371 AK7Q96M32 723 aa28.9■■■□□ 2.22
SPG7-214ENST00000566371 LGR6Q9HBX8 967 aa28.9■■■□□ 2.22
SPG7-214ENST00000566371 UBR3Q6ZT12 1888 aa28.89■■■□□ 2.22
SPG7-214ENST00000566371 FCHSD2O94868 740 aa28.89■■■□□ 2.22
SPG7-214ENST00000566371 MAP3K5Q99683 1374 aa28.88■■■□□ 2.21
SPG7-214ENST00000566371 COL23A1Q86Y22 540 aaPredicted RBP28.88■■■□□ 2.21
SPG7-214ENST00000566371 CICQ96RK0 1608 aaPredicted RBP28.87■■■□□ 2.21
SPG7-214ENST00000566371 SLC4A9Q96Q91 983 aa28.87■■■□□ 2.21
SPG7-214ENST00000566371 RBM42Q9BTD8 480 aaKnown RBP28.87■■■□□ 2.21
SPG7-214ENST00000566371 COL5A3P25940 1745 aaPredicted RBP28.86■■■□□ 2.21
SPG7-214ENST00000566371 GNAT3A8MTJ3 354 aa28.86■■■□□ 2.21
SPG7-214ENST00000566371 PHACTR3Q96KR7 559 aa28.86■■■□□ 2.21
SPG7-214ENST00000566371 MSH5O43196 834 aa28.83■■■□□ 2.21
SPG7-214ENST00000566371 SSFA2P28290 1259 aa28.83■■■□□ 2.21
SPG7-214ENST00000566371 POLD1P28340 1107 aa28.82■■■□□ 2.2
SPG7-214ENST00000566371 ARXQ96QS3 562 aa28.82■■■□□ 2.2
SPG7-214ENST00000566371 PTCD1O75127 700 aaKnown RBP28.81■■■□□ 2.2
SPG7-214ENST00000566371 AMIGO3Q86WK7 504 aa28.81■■■□□ 2.2
SPG7-214ENST00000566371 CNTNAP4Q9C0A0 1308 aa28.8■■■□□ 2.2
SPG7-214ENST00000566371 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.8■■■□□ 2.2
SPG7-214ENST00000566371 GNPATO15228 680 aa28.8■■■□□ 2.2
SPG7-214ENST00000566371 RC3H1Q5TC82 1133 aaKnown RBP28.8■■■□□ 2.2
SPG7-214ENST00000566371 TJP1Q07157 1748 aa28.8■■■□□ 2.2
SPG7-214ENST00000566371 CEMIPQ8WUJ3 1361 aa28.79■■■□□ 2.2
SPG7-214ENST00000566371 IL17REQ8NFR9 667 aa28.79■■■□□ 2.2
SPG7-214ENST00000566371 SIPA1L3O60292 1781 aaPredicted RBP28.79■■■□□ 2.2
SPG7-214ENST00000566371 MYBBP1AQ9BQG0 1328 aaKnown RBP28.78■■■□□ 2.2
SPG7-214ENST00000566371 KCPQ6ZWJ8 1503 aa28.78■■■□□ 2.2
SPG7-214ENST00000566371 PHF14O94880 888 aa28.77■■■□□ 2.2
SPG7-214ENST00000566371 FHDC1Q9C0D6 1143 aaPredicted RBP28.77■■■□□ 2.2
SPG7-214ENST00000566371 UBR2Q8IWV8 1755 aa28.77■■■□□ 2.2
SPG7-214ENST00000566371 TEFQ10587 303 aa28.76■■■□□ 2.19
SPG7-214ENST00000566371 SLC39A6Q13433 755 aa28.74■■■□□ 2.19
SPG7-214ENST00000566371 SYT17Q9BSW7 474 aa28.74■■■□□ 2.19
SPG7-214ENST00000566371 RTCBQ9Y3I0 505 aaKnown RBP28.74■■■□□ 2.19
SPG7-214ENST00000566371 ADRA2BP18089 450 aa28.73■■■□□ 2.19
SPG7-214ENST00000566371 MYH14Q7Z406 1995 aaKnown RBP28.72■■■□□ 2.19
SPG7-214ENST00000566371 NEFMP07197 916 aa28.72■■■□□ 2.19
SPG7-214ENST00000566371 MSL1Q68DK7 614 aa28.72■■■□□ 2.19
SPG7-214ENST00000566371 SMIM5Q71RC9 77 aa28.72■■■□□ 2.19
SPG7-214ENST00000566371 VSIG10Q8N0Z9 540 aa28.72■■■□□ 2.19
SPG7-214ENST00000566371 PNNQ9H307 717 aaKnown RBP28.72■■■□□ 2.19
SPG7-214ENST00000566371 HTATSF1O43719 755 aaKnown RBP28.71■■■□□ 2.19
SPG7-214ENST00000566371 RPS6KA4O75676 772 aa28.71■■■□□ 2.19
SPG7-214ENST00000566371 TTC5Q8N0Z6 440 aa28.71■■■□□ 2.19
SPG7-214ENST00000566371 PLEKHF1Q96S99 279 aa28.71■■■□□ 2.19
SPG7-214ENST00000566371 CRKLP46109 303 aaKnown RBP28.7■■■□□ 2.18
SPG7-214ENST00000566371 TRAPPC3LQ5T215 181 aa28.7■■■□□ 2.18
SPG7-214ENST00000566371 RTF1Q92541 710 aaKnown RBP28.7■■■□□ 2.18
SPG7-214ENST00000566371 PRKRIP1Q9H875 184 aaPredicted RBP28.69■■■□□ 2.18
SPG7-214ENST00000566371 ZNF790Q6PG37 636 aa28.68■■■□□ 2.18
SPG7-214ENST00000566371 DNAJC10Q8IXB1 793 aa28.67■■■□□ 2.18
SPG7-214ENST00000566371 C4AP0C0L4 1744 aa28.66■■■□□ 2.18
SPG7-214ENST00000566371 DCAF8L1A6NGE4 600 aa28.65■■■□□ 2.18
SPG7-214ENST00000566371 INTS5Q6P9B9 1019 aaKnown RBP28.65■■■□□ 2.18
SPG7-214ENST00000566371 MCM10Q7L590 875 aa28.65■■■□□ 2.18
SPG7-214ENST00000566371 ARHGEF1Q92888 912 aaKnown RBP28.65■■■□□ 2.18
SPG7-214ENST00000566371 CYP19A1P11511 503 aaPredicted RBP28.64■■■□□ 2.18
SPG7-214ENST00000566371 CCDC87Q9NVE4 849 aa28.64■■■□□ 2.18
SPG7-214ENST00000566371 DLG5Q8TDM6 1919 aa28.64■■■□□ 2.18
SPG7-214ENST00000566371 MAPK8IP3Q9UPT6 1336 aa28.64■■■□□ 2.17
SPG7-214ENST00000566371 BTBD11A6QL63 1104 aa28.63■■■□□ 2.17
SPG7-214ENST00000566371 ZNF496Q96IT1 587 aaPredicted RBP28.63■■■□□ 2.17
SPG7-214ENST00000566371 RFC4P35249 363 aa28.62■■■□□ 2.17
SPG7-214ENST00000566371 NFE2L2Q16236 605 aa28.62■■■□□ 2.17
SPG7-214ENST00000566371 HEG1Q9ULI3 1381 aa28.62■■■□□ 2.17
SPG7-214ENST00000566371 ZNF316A6NFI3 1004 aaPredicted RBP28.61■■■□□ 2.17
SPG7-214ENST00000566371 FMNL2Q96PY5 1086 aa28.61■■■□□ 2.17
SPG7-214ENST00000566371 KLHL34Q8N239 644 aa28.6■■■□□ 2.17
SPG7-214ENST00000566371 NLGN1Q8N2Q7 840 aa28.6■■■□□ 2.17
SPG7-214ENST00000566371 TEX13AQ9BXU3 409 aaPredicted RBP28.6■■■□□ 2.17
SPG7-214ENST00000566371 STARD3NLO95772 234 aa28.59■■■□□ 2.17
SPG7-214ENST00000566371 DCTN1Q14203 1278 aa28.59■■■□□ 2.17
SPG7-214ENST00000566371 SOS1Q07889 1333 aaPredicted RBP28.59■■■□□ 2.17
SPG7-214ENST00000566371 CD2APQ9Y5K6 639 aa28.58■■■□□ 2.17
SPG7-214ENST00000566371 GYS1P13807 737 aa28.57■■■□□ 2.16
SPG7-214ENST00000566371 USP42Q9H9J4 1324 aaKnown RBP28.56■■■□□ 2.16
SPG7-214ENST00000566371 MMP10P09238 476 aa28.55■■■□□ 2.16
SPG7-214ENST00000566371 WDR43Q15061 677 aaKnown RBP eCLIP28.55■■■□□ 2.16
SPG7-214ENST00000566371 TAF7Q15545 349 aaPredicted RBP28.55■■■□□ 2.16
SPG7-214ENST00000566371 ZBTB1Q9Y2K1 713 aa28.55■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms