RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 FAM83GA6ND36 823 aa26.4■■□□□ 1.82
SPSB3-208ENST00000566339 KLHL34Q8N239 644 aa26.4■■□□□ 1.82
SPSB3-208ENST00000566339 ZNF500O60304 480 aaPredicted RBP26.39■■□□□ 1.82
SPSB3-208ENST00000566339 EIF4A2Q14240 407 aaKnown RBP26.39■■□□□ 1.82
SPSB3-208ENST00000566339 C16orf71Q8IYS4 520 aaPredicted RBP26.39■■□□□ 1.82
SPSB3-208ENST00000566339 INTS4Q96HW7 963 aaKnown RBP26.39■■□□□ 1.82
SPSB3-208ENST00000566339 MCCP23508 829 aa26.38■■□□□ 1.81
SPSB3-208ENST00000566339 NOL7Q9UMY1 257 aaKnown RBP26.38■■□□□ 1.81
SPSB3-208ENST00000566339 USP31Q70CQ4 1352 aa26.38■■□□□ 1.81
SPSB3-208ENST00000566339 FMN2Q9NZ56 1722 aa26.38■■□□□ 1.81
SPSB3-208ENST00000566339 CAVIN1Q6NZI2 390 aaKnown RBP26.38■■□□□ 1.81
SPSB3-208ENST00000566339 CUL4AQ13619 759 aa26.37■■□□□ 1.81
SPSB3-208ENST00000566339 RRS1Q15050 365 aaKnown RBP26.36■■□□□ 1.81
SPSB3-208ENST00000566339 LRSAM1Q6UWE0 723 aa26.36■■□□□ 1.81
SPSB3-208ENST00000566339 AOX1Q06278 1338 aa26.36■■□□□ 1.81
SPSB3-208ENST00000566339 PDE1AP54750 535 aa26.35■■□□□ 1.81
SPSB3-208ENST00000566339 USP6P35125 1406 aa26.35■■□□□ 1.81
SPSB3-208ENST00000566339 PLEKHG3A1L390 1219 aa26.35■■□□□ 1.81
SPSB3-208ENST00000566339 SULT6B1Q6IMI4 303 aa26.35■■□□□ 1.81
SPSB3-208ENST00000566339 MEIS3Q99687 375 aa26.35■■□□□ 1.81
SPSB3-208ENST00000566339 SRCIN1Q9C0H9 1055 aa26.35■■□□□ 1.81
SPSB3-208ENST00000566339 SALL3Q9BXA9 1300 aa26.34■■□□□ 1.81
SPSB3-208ENST00000566339 TUBGCP6Q96RT7 1819 aa26.34■■□□□ 1.81
SPSB3-208ENST00000566339 DCTN1Q14203 1278 aa26.34■■□□□ 1.81
SPSB3-208ENST00000566339 OTUD7AQ8TE49 926 aaPredicted RBP26.33■■□□□ 1.81
SPSB3-208ENST00000566339 ZDHHC9Q9Y397 364 aa26.33■■□□□ 1.81
SPSB3-208ENST00000566339 HTATSF1O43719 755 aaKnown RBP26.33■■□□□ 1.8
SPSB3-208ENST00000566339 CSPP1Q1MSJ5 1256 aa26.33■■□□□ 1.8
SPSB3-208ENST00000566339 N4BP2Q86UW6 1770 aaPredicted RBP26.31■■□□□ 1.8
SPSB3-208ENST00000566339 BRD1O95696 1058 aa26.31■■□□□ 1.8
SPSB3-208ENST00000566339 GNAI2P04899 355 aa26.31■■□□□ 1.8
SPSB3-208ENST00000566339 SYAP1Q96A49 352 aaPredicted RBP26.31■■□□□ 1.8
SPSB3-208ENST00000566339 RBSNQ9H1K0 784 aa26.31■■□□□ 1.8
SPSB3-208ENST00000566339 PDCL3Q9H2J4 239 aa26.31■■□□□ 1.8
SPSB3-208ENST00000566339 PRPF40AO75400 957 aaKnown RBP26.3■■□□□ 1.8
SPSB3-208ENST00000566339 GNAI3P08754 354 aa26.3■■□□□ 1.8
SPSB3-208ENST00000566339 KIAA1211Q6ZU35 1233 aa26.3■■□□□ 1.8
SPSB3-208ENST00000566339 GPT2Q8TD30 523 aa26.3■■□□□ 1.8
SPSB3-208ENST00000566339 NCLP19338 710 aaKnown RBP26.3■■□□□ 1.8
SPSB3-208ENST00000566339 MAP7D2Q96T17 732 aa26.3■■□□□ 1.8
SPSB3-208ENST00000566339 STAP2Q9UGK3 403 aa26.3■■□□□ 1.8
SPSB3-208ENST00000566339 PXDNLA1KZ92 1463 aa26.3■■□□□ 1.8
SPSB3-208ENST00000566339 PTPRUQ92729 1446 aa26.29■■□□□ 1.8
SPSB3-208ENST00000566339 SLC4A2P04920 1241 aa26.29■■□□□ 1.8
SPSB3-208ENST00000566339 ZGPATQ8N5A5 531 aaKnown RBP26.29■■□□□ 1.8
SPSB3-208ENST00000566339 ESYT1Q9BSJ8 1104 aa26.29■■□□□ 1.8
SPSB3-208ENST00000566339 CCDC39Q9UFE4 941 aa26.29■■□□□ 1.8
SPSB3-208ENST00000566339 STRCP1A6NGW2 1772 aa26.28■■□□□ 1.8
SPSB3-208ENST00000566339 USP54Q70EL1 1684 aa26.28■■□□□ 1.8
SPSB3-208ENST00000566339 DIP2AQ14689 1571 aa26.28■■□□□ 1.8
SPSB3-208ENST00000566339 UBAP1LF5GYI3 381 aa26.28■■□□□ 1.8
SPSB3-208ENST00000566339 KDRP35968 1356 aa26.28■■□□□ 1.8
SPSB3-208ENST00000566339 SMARCA5O60264 1052 aaPredicted RBP26.28■■□□□ 1.8
SPSB3-208ENST00000566339 PRIM1P49642 420 aaKnown RBP26.28■■□□□ 1.8
SPSB3-208ENST00000566339 TMX3Q96JJ7 454 aa26.28■■□□□ 1.8
SPSB3-208ENST00000566339 SLC26A8Q96RN1 970 aa26.28■■□□□ 1.8
SPSB3-208ENST00000566339 BABAM1Q9NWV8 329 aa26.28■■□□□ 1.8
SPSB3-208ENST00000566339 PKP1Q13835 747 aa26.27■■□□□ 1.8
SPSB3-208ENST00000566339 AEBP1Q8IUX7 1158 aa26.27■■□□□ 1.8
SPSB3-208ENST00000566339 ZKSCAN5Q9Y2L8 839 aa26.27■■□□□ 1.8
SPSB3-208ENST00000566339 AK9Q5TCS8 1911 aa26.27■■□□□ 1.8
SPSB3-208ENST00000566339 PHF14O94880 888 aa26.26■■□□□ 1.79
SPSB3-208ENST00000566339 LRRCC1Q9C099 1032 aa26.26■■□□□ 1.79
SPSB3-208ENST00000566339 TTC21AQ8NDW8 1320 aa26.26■■□□□ 1.79
SPSB3-208ENST00000566339 LRRC37A3O60309 1634 aa26.26■■□□□ 1.79
SPSB3-208ENST00000566339 ACEP12821 1306 aa26.25■■□□□ 1.79
SPSB3-208ENST00000566339 CACNA1FO60840 1977 aa26.25■■□□□ 1.79
SPSB3-208ENST00000566339 NEK4P51957 841 aa26.24■■□□□ 1.79
SPSB3-208ENST00000566339 ATP8B2P98198 1209 aa26.24■■□□□ 1.79
SPSB3-208ENST00000566339 MCM10Q7L590 875 aa26.24■■□□□ 1.79
SPSB3-208ENST00000566339 RTF1Q92541 710 aaKnown RBP26.24■■□□□ 1.79
SPSB3-208ENST00000566339 XRN1Q8IZH2 1706 aaKnown RBP26.24■■□□□ 1.79
SPSB3-208ENST00000566339 KRT24Q2M2I5 525 aa26.23■■□□□ 1.79
SPSB3-208ENST00000566339 STK31Q9BXU1 1019 aa26.23■■□□□ 1.79
SPSB3-208ENST00000566339 TMEM63CQ9P1W3 806 aa26.23■■□□□ 1.79
SPSB3-208ENST00000566339 MX1P20591 662 aa26.22■■□□□ 1.79
SPSB3-208ENST00000566339 SBNO1A3KN83 1393 aa26.22■■□□□ 1.79
SPSB3-208ENST00000566339 UVSSAQ2YD98 709 aa26.21■■□□□ 1.79
SPSB3-208ENST00000566339 FAM184AQ8NB25 1140 aa26.21■■□□□ 1.79
SPSB3-208ENST00000566339 TSPYL4Q9UJ04 414 aa26.21■■□□□ 1.79
SPSB3-208ENST00000566339 FAM208AQ9UK61 1670 aaKnown RBP26.21■■□□□ 1.79
SPSB3-208ENST00000566339 PLEKHG5O94827 1062 aa26.2■■□□□ 1.79
SPSB3-208ENST00000566339 CHMLP26374 656 aa26.2■■□□□ 1.79
SPSB3-208ENST00000566339 MTERF4Q7Z6M4 381 aaKnown RBP26.2■■□□□ 1.79
SPSB3-208ENST00000566339 CCDC30Q5VVM6 783 aa26.2■■□□□ 1.78
SPSB3-208ENST00000566339 FLT4P35916 1363 aa26.2■■□□□ 1.78
SPSB3-208ENST00000566339 PIK3C2AO00443 1686 aa26.2■■□□□ 1.78
SPSB3-208ENST00000566339 MARF1Q9Y4F3 1742 aaKnown RBP26.19■■□□□ 1.78
SPSB3-208ENST00000566339 TMEM87AQ8NBN3 555 aa26.19■■□□□ 1.78
SPSB3-208ENST00000566339 WDR33Q9C0J8 1336 aaKnown RBP26.18■■□□□ 1.78
SPSB3-208ENST00000566339 TSPY26PQ9H489 355 aa26.18■■□□□ 1.78
SPSB3-208ENST00000566339 EIF2AK3Q9NZJ5 1116 aaKnown RBP26.18■■□□□ 1.78
SPSB3-208ENST00000566339 RGPD8O14715 1765 aaPredicted RBP26.18■■□□□ 1.78
SPSB3-208ENST00000566339 RAB11FIP3O75154 756 aa26.17■■□□□ 1.78
SPSB3-208ENST00000566339 LETM1O95202 739 aaPredicted RBP26.17■■□□□ 1.78
SPSB3-208ENST00000566339 IGSF1Q8N6C5 1336 aa26.16■■□□□ 1.78
SPSB3-208ENST00000566339 RBM27Q9P2N5 1060 aaKnown RBP26.16■■□□□ 1.78
SPSB3-208ENST00000566339 SYCE3A1L190 88 aa26.15■■□□□ 1.78
SPSB3-208ENST00000566339 APBB1O00213 710 aa26.15■■□□□ 1.78
SPSB3-208ENST00000566339 PIP4K2BP78356 416 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms