RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 DCTN1Q14203 1278 aa10.79□□□□□ -0.68
CDH13-208ENST00000566333 MCM10Q7L590 875 aa10.79□□□□□ -0.68
CDH13-208ENST00000566333 UPF1Q92900 1129 aaKnown RBP eCLIP10.79□□□□□ -0.68
CDH13-208ENST00000566333 BCL11BQ9C0K0 894 aaPredicted RBP10.79□□□□□ -0.68
CDH13-208ENST00000566333 TRIM35Q9UPQ4 493 aa10.79□□□□□ -0.68
CDH13-208ENST00000566333 MYH14Q7Z406 1995 aaKnown RBP10.79□□□□□ -0.68
CDH13-208ENST00000566333 SENP3-EIF4A1A0A087X0R7 540 aa10.78□□□□□ -0.68
CDH13-208ENST00000566333 ERVV-2B6SEH9 535 aa10.78□□□□□ -0.68
CDH13-208ENST00000566333 HTATSF1O43719 755 aaKnown RBP10.78□□□□□ -0.68
CDH13-208ENST00000566333 NEFMP07197 916 aa10.78□□□□□ -0.68
CDH13-208ENST00000566333 RIPK4P57078 832 aa10.78□□□□□ -0.68
CDH13-208ENST00000566333 PIGBQ92521 554 aa10.78□□□□□ -0.68
CDH13-208ENST00000566333 THUMPD2Q9BTF0 503 aaKnown RBP10.78□□□□□ -0.68
CDH13-208ENST00000566333 SLC52A2Q9HAB3 445 aa10.78□□□□□ -0.68
CDH13-208ENST00000566333 UBR3Q6ZT12 1888 aa10.78□□□□□ -0.68
CDH13-208ENST00000566333 SYTL4Q96C24 671 aaPredicted RBP10.77□□□□□ -0.69
CDH13-208ENST00000566333 TMOD3Q9NYL9 352 aa10.77□□□□□ -0.69
CDH13-208ENST00000566333 C4BP0C0L5 1744 aa10.77□□□□□ -0.69
CDH13-208ENST00000566333 PALLDQ8WX93 1383 aa10.77□□□□□ -0.69
CDH13-208ENST00000566333 ZNF521Q96K83 1311 aa10.76□□□□□ -0.69
CDH13-208ENST00000566333 C4AP0C0L4 1744 aa10.75□□□□□ -0.69
CDH13-208ENST00000566333 LMOD3Q0VAK6 560 aa10.75□□□□□ -0.69
CDH13-208ENST00000566333 NEUROD2Q15784 382 aa10.75□□□□□ -0.69
CDH13-208ENST00000566333 CCDC27Q2M243 656 aa10.75□□□□□ -0.69
CDH13-208ENST00000566333 NCBP3Q53F19 620 aaKnown RBP10.75□□□□□ -0.69
CDH13-208ENST00000566333 NFATC2IPQ8NCF5 419 aa10.75□□□□□ -0.69
CDH13-208ENST00000566333 RTF1Q92541 710 aaKnown RBP10.75□□□□□ -0.69
CDH13-208ENST00000566333 ATG3Q9NT62 314 aa10.75□□□□□ -0.69
CDH13-208ENST00000566333 ASAP1Q9ULH1 1129 aa10.75□□□□□ -0.69
CDH13-208ENST00000566333 CABP4P57796 275 aa10.74□□□□□ -0.69
CDH13-208ENST00000566333 DEFB132Q7Z7B7 95 aa10.74□□□□□ -0.69
CDH13-208ENST00000566333 CASZ1Q86V15 1759 aa10.73□□□□□ -0.69
CDH13-208ENST00000566333 SOCS7O14512 581 aa10.73□□□□□ -0.69
CDH13-208ENST00000566333 PLSCR1O15162 318 aa10.73□□□□□ -0.69
CDH13-208ENST00000566333 APBA3O96018 575 aa10.73□□□□□ -0.69
CDH13-208ENST00000566333 TEFQ10587 303 aa10.73□□□□□ -0.69
CDH13-208ENST00000566333 SLC39A6Q13433 755 aa10.73□□□□□ -0.69
CDH13-208ENST00000566333 CCDC125Q86Z20 511 aa10.73□□□□□ -0.69
CDH13-208ENST00000566333 WWC1Q8IX03 1113 aa10.73□□□□□ -0.69
CDH13-208ENST00000566333 CAMKK2Q96RR4 588 aa10.73□□□□□ -0.69
CDH13-208ENST00000566333 EN1Q05925 392 aaPredicted RBP10.72□□□□□ -0.69
CDH13-208ENST00000566333 PROM2Q8N271 834 aa10.72□□□□□ -0.69
CDH13-208ENST00000566333 SLC4A9Q96Q91 983 aa10.72□□□□□ -0.69
CDH13-208ENST00000566333 HEG1Q9ULI3 1381 aa10.72□□□□□ -0.69
CDH13-208ENST00000566333 KCNQ3O43525 872 aa10.71□□□□□ -0.69
CDH13-208ENST00000566333 ZNF853P0CG23 659 aa10.71□□□□□ -0.69
CDH13-208ENST00000566333 BAG6P46379 1132 aa10.71□□□□□ -0.69
CDH13-208ENST00000566333 EZH2Q15910 746 aaKnown RBP10.71□□□□□ -0.69
CDH13-208ENST00000566333 ZNF790Q6PG37 636 aa10.71□□□□□ -0.69
CDH13-208ENST00000566333 BCORQ6W2J9 1755 aa10.71□□□□□ -0.69
CDH13-208ENST00000566333 NGEFQ8N5V2 710 aa10.71□□□□□ -0.69
CDH13-208ENST00000566333 LRRC4BQ9NT99 713 aa10.71□□□□□ -0.69
CDH13-208ENST00000566333 SCN7AQ01118 1682 aa10.7□□□□□ -0.7
CDH13-208ENST00000566333 SF3B2Q13435 895 aaKnown RBP10.7□□□□□ -0.7
CDH13-208ENST00000566333 TAF7Q15545 349 aaPredicted RBP10.7□□□□□ -0.7
CDH13-208ENST00000566333 TXNRD1Q16881 649 aa10.7□□□□□ -0.7
CDH13-208ENST00000566333 SMARCC1Q92922 1105 aaPredicted RBP10.7□□□□□ -0.7
CDH13-208ENST00000566333 ZNF496Q96IT1 587 aaPredicted RBP10.7□□□□□ -0.7
CDH13-208ENST00000566333 SALL2Q9Y467 1007 aaPredicted RBP10.7□□□□□ -0.7
CDH13-208ENST00000566333 CACNA1FO60840 1977 aa10.7□□□□□ -0.7
CDH13-208ENST00000566333 IL16Q14005 1332 aa10.69□□□□□ -0.7
CDH13-208ENST00000566333 LOC102724428A0A0B4J2F2 783 aa10.69□□□□□ -0.7
CDH13-208ENST00000566333 BTBD11A6QL63 1104 aa10.69□□□□□ -0.7
CDH13-208ENST00000566333 CHL1O00533 1208 aa10.69□□□□□ -0.7
CDH13-208ENST00000566333 KCNQ4P56696 695 aa10.69□□□□□ -0.7
CDH13-208ENST00000566333 SIK1P57059 783 aa10.69□□□□□ -0.7
CDH13-208ENST00000566333 ITPK1Q13572 414 aa10.69□□□□□ -0.7
CDH13-208ENST00000566333 SPINK5Q9NQ38 1064 aaPredicted RBP10.69□□□□□ -0.7
CDH13-208ENST00000566333 IFT57Q9NWB7 429 aa10.69□□□□□ -0.7
CDH13-208ENST00000566333 MIS18AQ9NYP9 233 aa10.69□□□□□ -0.7
CDH13-208ENST00000566333 COL24A1Q17RW2 1714 aa10.69□□□□□ -0.7
CDH13-208ENST00000566333 PTCD1O75127 700 aaKnown RBP10.68□□□□□ -0.7
CDH13-208ENST00000566333 SLC27A3Q5K4L6 730 aa10.68□□□□□ -0.7
CDH13-208ENST00000566333 CFAP44Q96MT7 982 aa10.68□□□□□ -0.7
CDH13-208ENST00000566333 ANO8Q9HCE9 1232 aaPredicted RBP10.68□□□□□ -0.7
CDH13-208ENST00000566333 MBIPQ9NS73 344 aa10.68□□□□□ -0.7
CDH13-208ENST00000566333 BABAM1Q9NWV8 329 aa10.68□□□□□ -0.7
CDH13-208ENST00000566333 TSPYL4Q9UJ04 414 aa10.68□□□□□ -0.7
CDH13-208ENST00000566333 CCNL1Q9UK58 526 aaPredicted RBP10.68□□□□□ -0.7
CDH13-208ENST00000566333 FANCIQ9NVI1 1328 aa10.67□□□□□ -0.7
CDH13-208ENST00000566333 EIF4A1P60842 406 aaKnown RBP10.67□□□□□ -0.7
CDH13-208ENST00000566333 HNRNPUQ00839 825 aaKnown RBP eCLIP10.67□□□□□ -0.7
CDH13-208ENST00000566333 CALD1Q05682 793 aaKnown RBP10.67□□□□□ -0.7
CDH13-208ENST00000566333 WDR63Q8IWG1 891 aa10.67□□□□□ -0.7
CDH13-208ENST00000566333 TTC5Q8N0Z6 440 aa10.67□□□□□ -0.7
CDH13-208ENST00000566333 LINC00116Q8NCU8 138 aa10.67□□□□□ -0.7
CDH13-208ENST00000566333 TSR2Q969E8 191 aaKnown RBP10.67□□□□□ -0.7
CDH13-208ENST00000566333 ZBED9Q6R2W3 1325 aa10.66□□□□□ -0.7
CDH13-208ENST00000566333 PRAMEF22A3QJZ6 481 aa10.66□□□□□ -0.7
CDH13-208ENST00000566333 GNAI1P63096 354 aa10.66□□□□□ -0.7
CDH13-208ENST00000566333 ZNF827Q17R98 1081 aa10.66□□□□□ -0.7
CDH13-208ENST00000566333 KRT24Q2M2I5 525 aa10.66□□□□□ -0.7
CDH13-208ENST00000566333 RBM42Q9BTD8 480 aaKnown RBP10.66□□□□□ -0.7
CDH13-208ENST00000566333 ANKRD36CQ5JPF3 1778 aa10.65□□□□□ -0.7
CDH13-208ENST00000566333 CNTNAP4Q9C0A0 1308 aa10.65□□□□□ -0.7
CDH13-208ENST00000566333 ATP6V1AP38606 617 aa10.65□□□□□ -0.7
CDH13-208ENST00000566333 PPP4R3CPQ6ZMV5 832 aa10.65□□□□□ -0.7
CDH13-208ENST00000566333 AMIGO3Q86WK7 504 aa10.65□□□□□ -0.7
CDH13-208ENST00000566333 DNAJC10Q8IXB1 793 aa10.65□□□□□ -0.7
CDH13-208ENST00000566333 VSIG10Q8N0Z9 540 aa10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms