RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 PANK3Q9H999 370 aa22.66■■□□□ 1.22
TSR3-202ENST00000566296 ITPK1Q13572 414 aa22.65■■□□□ 1.22
TSR3-202ENST00000566296 SMIM5Q71RC9 77 aa22.65■■□□□ 1.22
TSR3-202ENST00000566296 ATG3Q9NT62 314 aa22.64■■□□□ 1.21
TSR3-202ENST00000566296 KDRP35968 1356 aa22.63■■□□□ 1.21
TSR3-202ENST00000566296 PLEKHO1Q53GL0 409 aaPredicted RBP22.63■■□□□ 1.21
TSR3-202ENST00000566296 ZNF831Q5JPB2 1677 aa22.62■■□□□ 1.21
TSR3-202ENST00000566296 ERVV-2B6SEH9 535 aa22.62■■□□□ 1.21
TSR3-202ENST00000566296 DCAF5Q96JK2 942 aa22.62■■□□□ 1.21
TSR3-202ENST00000566296 ATP10DQ9P241 1426 aa22.62■■□□□ 1.21
TSR3-202ENST00000566296 AMOTQ4VCS5 1084 aa22.61■■□□□ 1.21
TSR3-202ENST00000566296 ZNF530Q6P9A1 599 aaPredicted RBP22.61■■□□□ 1.21
TSR3-202ENST00000566296 MORC1Q86VD1 984 aa22.61■■□□□ 1.21
TSR3-202ENST00000566296 KDM6AO15550 1401 aaPredicted RBP22.59■■□□□ 1.21
TSR3-202ENST00000566296 RBM42Q9BTD8 480 aaKnown RBP22.59■■□□□ 1.21
TSR3-202ENST00000566296 RTCBQ9Y3I0 505 aaKnown RBP22.59■■□□□ 1.21
TSR3-202ENST00000566296 COL5A3P25940 1745 aaPredicted RBP22.59■■□□□ 1.21
TSR3-202ENST00000566296 CABP4P57796 275 aa22.58■■□□□ 1.21
TSR3-202ENST00000566296 C1orf141Q5JVX7 400 aa22.58■■□□□ 1.21
TSR3-202ENST00000566296 CCER1Q8TC90 406 aaPredicted RBP22.58■■□□□ 1.21
TSR3-202ENST00000566296 MMP10P09238 476 aa22.57■■□□□ 1.2
TSR3-202ENST00000566296 WWC3Q9ULE0 1092 aa22.57■■□□□ 1.2
TSR3-202ENST00000566296 KNSTRNQ9Y448 316 aa22.57■■□□□ 1.2
TSR3-202ENST00000566296 ADRA2BP18089 450 aa22.56■■□□□ 1.2
TSR3-202ENST00000566296 TRAPPC3LQ5T215 181 aa22.56■■□□□ 1.2
TSR3-202ENST00000566296 CNTNAP4Q9C0A0 1308 aa22.56■■□□□ 1.2
TSR3-202ENST00000566296 ADCY9O60503 1353 aa22.55■■□□□ 1.2
TSR3-202ENST00000566296 AEBP1Q8IUX7 1158 aa22.55■■□□□ 1.2
TSR3-202ENST00000566296 CICQ96RK0 1608 aaPredicted RBP22.55■■□□□ 1.2
TSR3-202ENST00000566296 KIF13BQ9NQT8 1826 aa22.54■■□□□ 1.2
TSR3-202ENST00000566296 MTHFSP49914 203 aa22.54■■□□□ 1.2
TSR3-202ENST00000566296 RC3H1Q5TC82 1133 aaKnown RBP22.54■■□□□ 1.2
TSR3-202ENST00000566296 SLC4A9Q96Q91 983 aa22.54■■□□□ 1.2
TSR3-202ENST00000566296 GPBP1L1Q9HC44 474 aaPredicted RBP22.54■■□□□ 1.2
TSR3-202ENST00000566296 NLGN1Q8N2Q7 840 aa22.53■■□□□ 1.2
TSR3-202ENST00000566296 C4AP0C0L4 1744 aa22.52■■□□□ 1.2
TSR3-202ENST00000566296 SULT6B1Q6IMI4 303 aa22.52■■□□□ 1.2
TSR3-202ENST00000566296 PXDNLA1KZ92 1463 aa22.52■■□□□ 1.2
TSR3-202ENST00000566296 MYH14Q7Z406 1995 aaKnown RBP22.51■■□□□ 1.19
TSR3-202ENST00000566296 RFC4P35249 363 aa22.51■■□□□ 1.19
TSR3-202ENST00000566296 C10orf71Q711Q0 1435 aa22.5■■□□□ 1.19
TSR3-202ENST00000566296 RPS6KA4O75676 772 aa22.5■■□□□ 1.19
TSR3-202ENST00000566296 CCDC87Q9NVE4 849 aa22.5■■□□□ 1.19
TSR3-202ENST00000566296 SCN11AQ9UI33 1791 aa22.5■■□□□ 1.19
TSR3-202ENST00000566296 KIAA1551Q9HCM1 1747 aa22.49■■□□□ 1.19
TSR3-202ENST00000566296 N4BP2Q86UW6 1770 aaPredicted RBP22.49■■□□□ 1.19
TSR3-202ENST00000566296 ZNF526Q8TF50 670 aaPredicted RBP22.49■■□□□ 1.19
TSR3-202ENST00000566296 ARHGEF1Q92888 912 aaKnown RBP22.49■■□□□ 1.19
TSR3-202ENST00000566296 PTCD1O75127 700 aaKnown RBP22.48■■□□□ 1.19
TSR3-202ENST00000566296 TGFB2P61812 414 aa22.48■■□□□ 1.19
TSR3-202ENST00000566296 GYS1P13807 737 aa22.47■■□□□ 1.19
TSR3-202ENST00000566296 IL13P35225 146 aa22.47■■□□□ 1.19
TSR3-202ENST00000566296 PARP3Q9Y6F1 533 aa22.47■■□□□ 1.19
TSR3-202ENST00000566296 TJP1Q07157 1748 aa22.47■■□□□ 1.19
TSR3-202ENST00000566296 NFATC2IPQ8NCF5 419 aa22.46■■□□□ 1.19
TSR3-202ENST00000566296 CRKLP46109 303 aaKnown RBP22.45■■□□□ 1.18
TSR3-202ENST00000566296 AMER1Q5JTC6 1135 aaPredicted RBP22.45■■□□□ 1.18
TSR3-202ENST00000566296 BCS1LQ9Y276 419 aa22.45■■□□□ 1.18
TSR3-202ENST00000566296 AKAP4Q5JQC9 854 aa22.44■■□□□ 1.18
TSR3-202ENST00000566296 KIF7Q2M1P5 1343 aa22.43■■□□□ 1.18
TSR3-202ENST00000566296 VIRMAQ69YN4 1812 aaKnown RBP22.43■■□□□ 1.18
TSR3-202ENST00000566296 BRCA1P38398 1863 aaKnown RBP22.42■■□□□ 1.18
TSR3-202ENST00000566296 MRC1P22897 1456 aa22.41■■□□□ 1.18
TSR3-202ENST00000566296 USP42Q9H9J4 1324 aaKnown RBP22.41■■□□□ 1.18
TSR3-202ENST00000566296 A0A0G2JLW4 131 aa22.41■■□□□ 1.18
TSR3-202ENST00000566296 DPEP1P16444 411 aa22.4■■□□□ 1.18
TSR3-202ENST00000566296 SLC52A2Q9HAB3 445 aa22.4■■□□□ 1.18
TSR3-202ENST00000566296 FCHSD2O94868 740 aa22.39■■□□□ 1.17
TSR3-202ENST00000566296 SRP68Q9UHB9 627 aaKnown RBP22.39■■□□□ 1.17
TSR3-202ENST00000566296 HMOX1P09601 288 aa22.38■■□□□ 1.17
TSR3-202ENST00000566296 ARFGEF1Q9Y6D6 1849 aa22.38■■□□□ 1.17
TSR3-202ENST00000566296 FKBP8Q14318 412 aa22.37■■□□□ 1.17
TSR3-202ENST00000566296 ARHGAP27Q6ZUM4 889 aa22.37■■□□□ 1.17
TSR3-202ENST00000566296 RNMTO43148 476 aaKnown RBP22.36■■□□□ 1.17
TSR3-202ENST00000566296 HSPA6P17066 643 aa22.36■■□□□ 1.17
TSR3-202ENST00000566296 DNAJC10Q8IXB1 793 aa22.36■■□□□ 1.17
TSR3-202ENST00000566296 DIAPH1O60610 1272 aaKnown RBP22.35■■□□□ 1.17
TSR3-202ENST00000566296 ZPR1O75312 459 aa22.35■■□□□ 1.17
TSR3-202ENST00000566296 CC2D1BQ5T0F9 858 aaKnown RBP22.35■■□□□ 1.17
TSR3-202ENST00000566296 INTS5Q6P9B9 1019 aaKnown RBP22.35■■□□□ 1.17
TSR3-202ENST00000566296 ADAMTS7Q9UKP4 1686 aa22.35■■□□□ 1.17
TSR3-202ENST00000566296 KIF3CO14782 793 aa22.34■■□□□ 1.17
TSR3-202ENST00000566296 DDR1Q08345 913 aa22.34■■□□□ 1.17
TSR3-202ENST00000566296 LGR6Q9HBX8 967 aa22.34■■□□□ 1.17
TSR3-202ENST00000566296 PIM2Q9P1W9 311 aa22.34■■□□□ 1.17
TSR3-202ENST00000566296 KCPQ6ZWJ8 1503 aa22.34■■□□□ 1.17
TSR3-202ENST00000566296 SOS1Q07889 1333 aaPredicted RBP22.33■■□□□ 1.17
TSR3-202ENST00000566296 SLC39A6Q13433 755 aa22.32■■□□□ 1.16
TSR3-202ENST00000566296 COL15A1P39059 1388 aa22.31■■□□□ 1.16
TSR3-202ENST00000566296 MTHFSDQ2M296 383 aaKnown RBP22.31■■□□□ 1.16
TSR3-202ENST00000566296 DALRD3Q5D0E6 543 aaKnown RBP22.31■■□□□ 1.16
TSR3-202ENST00000566296 POLRMTO00411 1230 aaKnown RBP22.3■■□□□ 1.16
TSR3-202ENST00000566296 CYP19A1P11511 503 aaPredicted RBP22.3■■□□□ 1.16
TSR3-202ENST00000566296 USPL1Q5W0Q7 1092 aa22.3■■□□□ 1.16
TSR3-202ENST00000566296 UBR2Q8IWV8 1755 aa22.3■■□□□ 1.16
TSR3-202ENST00000566296 NPC1L1Q9UHC9 1359 aa22.29■■□□□ 1.16
TSR3-202ENST00000566296 PER1O15534 1290 aaPredicted RBP22.29■■□□□ 1.16
TSR3-202ENST00000566296 KCNA3P22001 575 aa22.29■■□□□ 1.16
TSR3-202ENST00000566296 COL3A1P02461 1466 aaPredicted RBP22.28■■□□□ 1.16
TSR3-202ENST00000566296 TTC5Q8N0Z6 440 aa22.28■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms