RNA–Protein interactions for RNA: ENST00000565704.5

GDPD3-203, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 2

Gene GDPD3, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-203ENST00000565704 HEG1Q9ULI3 1381 aa17.74■□□□□ 0.43
GDPD3-203ENST00000565704 CT47B1P0C2W7 299 aaPredicted RBP17.73■□□□□ 0.43
GDPD3-203ENST00000565704 EXOSC9Q06265 439 aaKnown RBP17.73■□□□□ 0.43
GDPD3-203ENST00000565704 TEFQ10587 303 aa17.73■□□□□ 0.43
GDPD3-203ENST00000565704 SEPT12Q8IYM1 358 aa17.73■□□□□ 0.43
GDPD3-203ENST00000565704 TOGARAM1Q9Y4F4 1720 aa17.72■□□□□ 0.43
GDPD3-203ENST00000565704 C8orf58Q8NAV2 365 aa17.72■□□□□ 0.43
GDPD3-203ENST00000565704 LAS1LQ9Y4W2 734 aaKnown RBP17.72■□□□□ 0.43
GDPD3-203ENST00000565704 RNF123Q5XPI4 1314 aa17.72■□□□□ 0.43
GDPD3-203ENST00000565704 KCNQ3O43525 872 aa17.71■□□□□ 0.43
GDPD3-203ENST00000565704 VAMP4O75379 141 aa17.71■□□□□ 0.43
GDPD3-203ENST00000565704 POTEAQ6S8J7 498 aa17.71■□□□□ 0.43
GDPD3-203ENST00000565704 TSPYL4Q9UJ04 414 aa17.71■□□□□ 0.43
GDPD3-203ENST00000565704 KDM3BQ7LBC6 1761 aa17.71■□□□□ 0.43
GDPD3-203ENST00000565704 BTBD11A6QL63 1104 aa17.7■□□□□ 0.42
GDPD3-203ENST00000565704 CABP4P57796 275 aa17.7■□□□□ 0.42
GDPD3-203ENST00000565704 EIF4A1P60842 406 aaKnown RBP17.7■□□□□ 0.42
GDPD3-203ENST00000565704 TSPYL6Q8N831 410 aa17.7■□□□□ 0.42
GDPD3-203ENST00000565704 PIGBQ92521 554 aa17.69■□□□□ 0.42
GDPD3-203ENST00000565704 KRT24Q2M2I5 525 aa17.68■□□□□ 0.42
GDPD3-203ENST00000565704 ZNF790Q6PG37 636 aa17.68■□□□□ 0.42
GDPD3-203ENST00000565704 RCAN3Q9UKA8 241 aa17.68■□□□□ 0.42
GDPD3-203ENST00000565704 SOS1Q07889 1333 aaPredicted RBP17.68■□□□□ 0.42
GDPD3-203ENST00000565704 RXRBP28702 533 aa17.67■□□□□ 0.42
GDPD3-203ENST00000565704 RARSP54136 660 aaKnown RBP17.67■□□□□ 0.42
GDPD3-203ENST00000565704 ZNF428Q96B54 188 aa17.67■□□□□ 0.42
GDPD3-203ENST00000565704 PRIM1P49642 420 aaKnown RBP17.66■□□□□ 0.42
GDPD3-203ENST00000565704 BRPF1P55201 1214 aaPredicted RBP17.66■□□□□ 0.42
GDPD3-203ENST00000565704 SLC39A6Q13433 755 aa17.66■□□□□ 0.42
GDPD3-203ENST00000565704 ITGB4P16144 1822 aa17.65■□□□□ 0.42
GDPD3-203ENST00000565704 TWISTNBQ3B726 338 aaPredicted RBP17.65■□□□□ 0.42
GDPD3-203ENST00000565704 PAPPAQ13219 1627 aa17.65■□□□□ 0.42
GDPD3-203ENST00000565704 GIGYF1O75420 1035 aaPredicted RBP17.64■□□□□ 0.41
GDPD3-203ENST00000565704 HOXB7P09629 217 aa17.64■□□□□ 0.41
GDPD3-203ENST00000565704 ATG3Q9NT62 314 aa17.64■□□□□ 0.41
GDPD3-203ENST00000565704 TMOD3Q9NYL9 352 aa17.64■□□□□ 0.41
GDPD3-203ENST00000565704 ALDH1L2Q3SY69 923 aa17.63■□□□□ 0.41
GDPD3-203ENST00000565704 ZNF496Q96IT1 587 aaPredicted RBP17.63■□□□□ 0.41
GDPD3-203ENST00000565704 KCPQ6ZWJ8 1503 aa17.62■□□□□ 0.41
GDPD3-203ENST00000565704 KCNQ2O43526 872 aa17.62■□□□□ 0.41
GDPD3-203ENST00000565704 KRT27Q7Z3Y8 459 aa17.62■□□□□ 0.41
GDPD3-203ENST00000565704 SSH1Q8WYL5 1049 aa17.62■□□□□ 0.41
GDPD3-203ENST00000565704 ASAP1Q9ULH1 1129 aa17.62■□□□□ 0.41
GDPD3-203ENST00000565704 SUPT16HQ9Y5B9 1047 aaKnown RBP17.62■□□□□ 0.41
GDPD3-203ENST00000565704 BRWD3Q6RI45 1802 aa17.62■□□□□ 0.41
GDPD3-203ENST00000565704 DOT1LQ8TEK3 1739 aa17.61■□□□□ 0.41
GDPD3-203ENST00000565704 UBR2Q8IWV8 1755 aa17.61■□□□□ 0.41
GDPD3-203ENST00000565704 ELL2O00472 640 aaPredicted RBP17.61■□□□□ 0.41
GDPD3-203ENST00000565704 BCAR3O75815 825 aa17.61■□□□□ 0.41
GDPD3-203ENST00000565704 PTF1AQ7RTS3 328 aa17.6■□□□□ 0.41
GDPD3-203ENST00000565704 ACSBG1Q96GR2 724 aa17.6■□□□□ 0.41
GDPD3-203ENST00000565704 RGS12O14924 1447 aa17.6■□□□□ 0.41
GDPD3-203ENST00000565704 A0A0G2JS52 829 aa17.59■□□□□ 0.41
GDPD3-203ENST00000565704 MYT1Q01538 1121 aa17.59■□□□□ 0.41
GDPD3-203ENST00000565704 FAM182BQ5T319 152 aa17.59■□□□□ 0.41
GDPD3-203ENST00000565704 MRPL50Q8N5N7 158 aaKnown RBP17.59■□□□□ 0.41
GDPD3-203ENST00000565704 FMNL2Q96PY5 1086 aa17.59■□□□□ 0.41
GDPD3-203ENST00000565704 SLC4A9Q96Q91 983 aa17.59■□□□□ 0.41
GDPD3-203ENST00000565704 PRAMEF22A3QJZ6 481 aa17.58■□□□□ 0.4
GDPD3-203ENST00000565704 FAM196AQ6ZSG2 479 aa17.58■□□□□ 0.4
GDPD3-203ENST00000565704 VSIG10Q8N0Z9 540 aa17.58■□□□□ 0.4
GDPD3-203ENST00000565704 SBF2Q86WG5 1849 aa17.57■□□□□ 0.4
GDPD3-203ENST00000565704 SNRPA1P09661 255 aaKnown RBP17.57■□□□□ 0.4
GDPD3-203ENST00000565704 TTC5Q8N0Z6 440 aa17.57■□□□□ 0.4
GDPD3-203ENST00000565704 NHSQ6T4R5 1651 aa17.56■□□□□ 0.4
GDPD3-203ENST00000565704 RRP1P56182 461 aaKnown RBP17.56■□□□□ 0.4
GDPD3-203ENST00000565704 SYTL4Q96C24 671 aaPredicted RBP17.55■□□□□ 0.4
GDPD3-203ENST00000565704 BCL11BQ9C0K0 894 aaPredicted RBP17.55■□□□□ 0.4
GDPD3-203ENST00000565704 USP16Q9Y5T5 823 aa17.55■□□□□ 0.4
GDPD3-203ENST00000565704 PDIA6Q15084 440 aa17.54■□□□□ 0.4
GDPD3-203ENST00000565704 CCDC30Q5VVM6 783 aa17.54■□□□□ 0.4
GDPD3-203ENST00000565704 LRP10Q7Z4F1 713 aa17.54■□□□□ 0.4
GDPD3-203ENST00000565704 SMARCC1Q92922 1105 aaPredicted RBP17.54■□□□□ 0.4
GDPD3-203ENST00000565704 CHMP4AQ9BY43 222 aa17.54■□□□□ 0.4
GDPD3-203ENST00000565704 ARHGAP45Q92619 1136 aa17.53■□□□□ 0.4
GDPD3-203ENST00000565704 C5P01031 1676 aa17.52■□□□□ 0.4
GDPD3-203ENST00000565704 PTCD1O75127 700 aaKnown RBP17.52■□□□□ 0.4
GDPD3-203ENST00000565704 HDGFL1Q5TGJ6 251 aa17.52■□□□□ 0.4
GDPD3-203ENST00000565704 BCL2L13Q9BXK5 485 aa17.52■□□□□ 0.4
GDPD3-203ENST00000565704 SMC4Q9NTJ3 1288 aa17.52■□□□□ 0.4
GDPD3-203ENST00000565704 KAT6BQ8WYB5 2073 aa17.52■□□□□ 0.39
GDPD3-203ENST00000565704 CICQ96RK0 1608 aaPredicted RBP17.51■□□□□ 0.39
GDPD3-203ENST00000565704 TCERG1O14776 1098 aaKnown RBP17.51■□□□□ 0.39
GDPD3-203ENST00000565704 PLIN1O60240 522 aa17.51■□□□□ 0.39
GDPD3-203ENST00000565704 SLC4A2P04920 1241 aa17.51■□□□□ 0.39
GDPD3-203ENST00000565704 TEX13AQ9BXU3 409 aaPredicted RBP17.51■□□□□ 0.39
GDPD3-203ENST00000565704 ZNF831Q5JPB2 1677 aa17.51■□□□□ 0.39
GDPD3-203ENST00000565704 LOC102724428A0A0B4J2F2 783 aa17.5■□□□□ 0.39
GDPD3-203ENST00000565704 EIF2S2P20042 333 aaKnown RBP17.5■□□□□ 0.39
GDPD3-203ENST00000565704 SIK1P57059 783 aa17.5■□□□□ 0.39
GDPD3-203ENST00000565704 G2E3Q7L622 706 aa17.5■□□□□ 0.39
GDPD3-203ENST00000565704 NOB1Q9ULX3 412 aaKnown RBP17.5■□□□□ 0.39
GDPD3-203ENST00000565704 PALLDQ8WX93 1383 aa17.5■□□□□ 0.39
GDPD3-203ENST00000565704 CACNA1FO60840 1977 aa17.49■□□□□ 0.39
GDPD3-203ENST00000565704 ERBB4Q15303 1308 aa17.49■□□□□ 0.39
GDPD3-203ENST00000565704 BTAF1O14981 1849 aa17.49■□□□□ 0.39
GDPD3-203ENST00000565704 PROSER3Q2NL68 480 aa17.49■□□□□ 0.39
GDPD3-203ENST00000565704 DNAJC10Q8IXB1 793 aa17.49■□□□□ 0.39
GDPD3-203ENST00000565704 DDX21Q9NR30 783 aaKnown RBP eCLIP17.49■□□□□ 0.39
GDPD3-203ENST00000565704 DBF4Q9UBU7 674 aaPredicted RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms