RNA–Protein interactions for RNA: ENST00000565256.1

SNHG20-203, Transcript of small nucleolar RNA host gene 20, humanhuman

TSL 1 (best)

Gene SNHG20, Length 1,234 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG20-203ENST00000565256 LGR6Q9HBX8 967 aa17.25■□□□□ 0.35
SNHG20-203ENST00000565256 ADAMTS7Q9UKP4 1686 aa17.24■□□□□ 0.35
SNHG20-203ENST00000565256 CHL1O00533 1208 aa17.24■□□□□ 0.35
SNHG20-203ENST00000565256 PHKG2P15735 406 aa17.24■□□□□ 0.35
SNHG20-203ENST00000565256 NBPF14Q5TI25 921 aa17.24■□□□□ 0.35
SNHG20-203ENST00000565256 MPRIPQ6WCQ1 1025 aa17.24■□□□□ 0.35
SNHG20-203ENST00000565256 ZCRB1Q8TBF4 217 aaKnown RBP17.24■□□□□ 0.35
SNHG20-203ENST00000565256 PPP1R1BQ9UD71 204 aaPredicted RBP17.24■□□□□ 0.35
SNHG20-203ENST00000565256 CEMIPQ8WUJ3 1361 aa17.24■□□□□ 0.35
SNHG20-203ENST00000565256 UTRNP46939 3433 aa17.24■□□□□ 0.35
SNHG20-203ENST00000565256 WNK3Q9BYP7 1800 aa17.24■□□□□ 0.35
SNHG20-203ENST00000565256 CYP27B1O15528 508 aa17.23■□□□□ 0.35
SNHG20-203ENST00000565256 EXOSC9Q06265 439 aaKnown RBP17.23■□□□□ 0.35
SNHG20-203ENST00000565256 IFNL2Q8IZJ0 200 aa17.23■□□□□ 0.35
SNHG20-203ENST00000565256 MBIPQ9NS73 344 aa17.23■□□□□ 0.35
SNHG20-203ENST00000565256 SHANK3Q9BYB0 1731 aa17.23■□□□□ 0.35
SNHG20-203ENST00000565256 SCN11AQ9UI33 1791 aa17.23■□□□□ 0.35
SNHG20-203ENST00000565256 RNMTO43148 476 aaKnown RBP17.22■□□□□ 0.35
SNHG20-203ENST00000565256 THRAP3Q9Y2W1 955 aaKnown RBP17.22■□□□□ 0.35
SNHG20-203ENST00000565256 CASZ1Q86V15 1759 aa17.21■□□□□ 0.35
SNHG20-203ENST00000565256 TAF7Q15545 349 aaPredicted RBP17.21■□□□□ 0.35
SNHG20-203ENST00000565256 ANO8Q9HCE9 1232 aaPredicted RBP17.21■□□□□ 0.35
SNHG20-203ENST00000565256 RNF123Q5XPI4 1314 aa17.21■□□□□ 0.34
SNHG20-203ENST00000565256 BABAM1Q9NWV8 329 aa17.2■□□□□ 0.34
SNHG20-203ENST00000565256 MIS18AQ9NYP9 233 aa17.2■□□□□ 0.34
SNHG20-203ENST00000565256 SIPA1L3O60292 1781 aaPredicted RBP17.2■□□□□ 0.34
SNHG20-203ENST00000565256 PCDH11XQ9BZA7 1347 aa17.2■□□□□ 0.34
SNHG20-203ENST00000565256 PCDH11YQ9BZA8 1340 aa17.2■□□□□ 0.34
SNHG20-203ENST00000565256 ZNF784Q8NCA9 323 aaPredicted RBP17.19■□□□□ 0.34
SNHG20-203ENST00000565256 PDGFDQ9GZP0 370 aaPredicted RBP17.19■□□□□ 0.34
SNHG20-203ENST00000565256 HSP90AB1P08238 724 aaKnown RBP17.18■□□□□ 0.34
SNHG20-203ENST00000565256 CT47B1P0C2W7 299 aaPredicted RBP17.18■□□□□ 0.34
SNHG20-203ENST00000565256 TEFQ10587 303 aa17.18■□□□□ 0.34
SNHG20-203ENST00000565256 CDCA7Q9BWT1 371 aaPredicted RBP17.18■□□□□ 0.34
SNHG20-203ENST00000565256 TSPYL4Q9UJ04 414 aa17.18■□□□□ 0.34
SNHG20-203ENST00000565256 KDM6AO15550 1401 aaPredicted RBP17.18■□□□□ 0.34
SNHG20-203ENST00000565256 NKX1-1Q15270 411 aaPredicted RBP17.17■□□□□ 0.34
SNHG20-203ENST00000565256 DDX54Q8TDD1 881 aaKnown RBP17.17■□□□□ 0.34
SNHG20-203ENST00000565256 DCAF5Q96JK2 942 aa17.17■□□□□ 0.34
SNHG20-203ENST00000565256 GTF3C3Q9Y5Q9 886 aa17.17■□□□□ 0.34
SNHG20-203ENST00000565256 RGPD3A6NKT7 1758 aaPredicted RBP17.16■□□□□ 0.34
SNHG20-203ENST00000565256 RGPD4Q7Z3J3 1758 aa17.16■□□□□ 0.34
SNHG20-203ENST00000565256 EXOC5O00471 708 aa17.16■□□□□ 0.34
SNHG20-203ENST00000565256 PTF1AQ7RTS3 328 aa17.16■□□□□ 0.34
SNHG20-203ENST00000565256 C8orf58Q8NAV2 365 aa17.16■□□□□ 0.34
SNHG20-203ENST00000565256 KDM3BQ7LBC6 1761 aa17.15■□□□□ 0.34
SNHG20-203ENST00000565256 DCAF8L1A6NGE4 600 aa17.15■□□□□ 0.34
SNHG20-203ENST00000565256 VAMP4O75379 141 aa17.15■□□□□ 0.34
SNHG20-203ENST00000565256 PTGER2P43116 358 aa17.15■□□□□ 0.34
SNHG20-203ENST00000565256 RARSP54136 660 aaKnown RBP17.15■□□□□ 0.34
SNHG20-203ENST00000565256 TSPYL6Q8N831 410 aa17.15■□□□□ 0.34
SNHG20-203ENST00000565256 BCAR3O75815 825 aa17.14■□□□□ 0.33
SNHG20-203ENST00000565256 RRP1P56182 461 aaKnown RBP17.14■□□□□ 0.33
SNHG20-203ENST00000565256 BTBD11A6QL63 1104 aa17.13■□□□□ 0.33
SNHG20-203ENST00000565256 ELL2O00472 640 aaPredicted RBP17.13■□□□□ 0.33
SNHG20-203ENST00000565256 NEFLP07196 543 aa17.13■□□□□ 0.33
SNHG20-203ENST00000565256 TWISTNBQ3B726 338 aaPredicted RBP17.13■□□□□ 0.33
SNHG20-203ENST00000565256 SLC52A2Q9HAB3 445 aa17.13■□□□□ 0.33
SNHG20-203ENST00000565256 TNS2Q63HR2 1409 aa17.13■□□□□ 0.33
SNHG20-203ENST00000565256 MRC1P22897 1456 aa17.12■□□□□ 0.33
SNHG20-203ENST00000565256 PLSCR1O15162 318 aa17.12■□□□□ 0.33
SNHG20-203ENST00000565256 KRT24Q2M2I5 525 aa17.12■□□□□ 0.33
SNHG20-203ENST00000565256 PROM2Q8N271 834 aa17.12■□□□□ 0.33
SNHG20-203ENST00000565256 NFATC2IPQ8NCF5 419 aa17.12■□□□□ 0.33
SNHG20-203ENST00000565256 ERVV-2B6SEH9 535 aa17.11■□□□□ 0.33
SNHG20-203ENST00000565256 KCNQ3O43525 872 aa17.11■□□□□ 0.33
SNHG20-203ENST00000565256 ZBTB7AO95365 584 aa17.11■□□□□ 0.33
SNHG20-203ENST00000565256 FKBP8Q14318 412 aa17.11■□□□□ 0.33
SNHG20-203ENST00000565256 DDB1Q16531 1140 aa17.11■□□□□ 0.33
SNHG20-203ENST00000565256 ZNF428Q96B54 188 aa17.11■□□□□ 0.33
SNHG20-203ENST00000565256 TOGARAM1Q9Y4F4 1720 aa17.1■□□□□ 0.33
SNHG20-203ENST00000565256 PLIN1O60240 522 aa17.1■□□□□ 0.33
SNHG20-203ENST00000565256 CABP4P57796 275 aa17.1■□□□□ 0.33
SNHG20-203ENST00000565256 IRX6P78412 446 aaPredicted RBP17.1■□□□□ 0.33
SNHG20-203ENST00000565256 ALDH1L2Q3SY69 923 aa17.1■□□□□ 0.33
SNHG20-203ENST00000565256 SSH1Q8WYL5 1049 aa17.1■□□□□ 0.33
SNHG20-203ENST00000565256 EIF4A1P60842 406 aaKnown RBP17.09■□□□□ 0.33
SNHG20-203ENST00000565256 SBF2Q86WG5 1849 aa17.09■□□□□ 0.33
SNHG20-203ENST00000565256 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.08■□□□□ 0.32
SNHG20-203ENST00000565256 BCL2L13Q9BXK5 485 aa17.08■□□□□ 0.32
SNHG20-203ENST00000565256 ITGB4P16144 1822 aa17.07■□□□□ 0.32
SNHG20-203ENST00000565256 C1QTNF8P60827 252 aa17.07■□□□□ 0.32
SNHG20-203ENST00000565256 MARCH10Q8NA82 808 aaPredicted RBP17.07■□□□□ 0.32
SNHG20-203ENST00000565256 FHDC1Q9C0D6 1143 aaPredicted RBP17.07■□□□□ 0.32
SNHG20-203ENST00000565256 SMC4Q9NTJ3 1288 aa17.07■□□□□ 0.32
SNHG20-203ENST00000565256 SOS1Q07889 1333 aaPredicted RBP17.06■□□□□ 0.32
SNHG20-203ENST00000565256 SLC39A6Q13433 755 aa17.06■□□□□ 0.32
SNHG20-203ENST00000565256 ZNF790Q6PG37 636 aa17.06■□□□□ 0.32
SNHG20-203ENST00000565256 SGIP1Q9BQI5 828 aa17.06■□□□□ 0.32
SNHG20-203ENST00000565256 SYT17Q9BSW7 474 aa17.06■□□□□ 0.32
SNHG20-203ENST00000565256 BCL11BQ9C0K0 894 aaPredicted RBP17.06■□□□□ 0.32
SNHG20-203ENST00000565256 ATF5Q9Y2D1 282 aaPredicted RBP17.06■□□□□ 0.32
SNHG20-203ENST00000565256 BRPF1P55201 1214 aaPredicted RBP17.05■□□□□ 0.32
SNHG20-203ENST00000565256 MRPL50Q8N5N7 158 aaKnown RBP17.05■□□□□ 0.32
SNHG20-203ENST00000565256 BCL9O00512 1426 aa17.04■□□□□ 0.32
SNHG20-203ENST00000565256 HEG1Q9ULI3 1381 aa17.04■□□□□ 0.32
SNHG20-203ENST00000565256 TCERG1O14776 1098 aaKnown RBP17.04■□□□□ 0.32
SNHG20-203ENST00000565256 IFFO2Q5TF58 517 aa17.04■□□□□ 0.32
SNHG20-203ENST00000565256 HOXB7P09629 217 aa17.03■□□□□ 0.32
SNHG20-203ENST00000565256 C20orf194Q5TEA3 1177 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms