RNA–Protein interactions for RNA: ENST00000565151.1

USB1-210, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 886 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-210ENST00000565151 CNGB1Q14028 1251 aaPredicted RBP20.04■□□□□ 0.8
USB1-210ENST00000565151 PLEKHO1Q53GL0 409 aaPredicted RBP20.04■□□□□ 0.8
USB1-210ENST00000565151 NPC1L1Q9UHC9 1359 aa20.04■□□□□ 0.8
USB1-210ENST00000565151 ADAMTS7Q9UKP4 1686 aa20.03■□□□□ 0.8
USB1-210ENST00000565151 TJP1Q07157 1748 aa20.03■□□□□ 0.8
USB1-210ENST00000565151 MSL1Q68DK7 614 aa20.03■□□□□ 0.8
USB1-210ENST00000565151 ERVV-2B6SEH9 535 aa20.02■□□□□ 0.8
USB1-210ENST00000565151 DCAF5Q96JK2 942 aa20.02■□□□□ 0.8
USB1-210ENST00000565151 HMOX1P09601 288 aa20.01■□□□□ 0.79
USB1-210ENST00000565151 AMOTQ4VCS5 1084 aa20.01■□□□□ 0.79
USB1-210ENST00000565151 MSH5O43196 834 aa20■□□□□ 0.79
USB1-210ENST00000565151 NLGN2Q8NFZ4 835 aa20■□□□□ 0.79
USB1-210ENST00000565151 C4AP0C0L4 1744 aa19.99■□□□□ 0.79
USB1-210ENST00000565151 CICQ96RK0 1608 aaPredicted RBP19.98■□□□□ 0.79
USB1-210ENST00000565151 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.98■□□□□ 0.79
USB1-210ENST00000565151 ATP6V1AP38606 617 aa19.98■□□□□ 0.79
USB1-210ENST00000565151 LGR6Q9HBX8 967 aa19.98■□□□□ 0.79
USB1-210ENST00000565151 PHF14O94880 888 aa19.97■□□□□ 0.79
USB1-210ENST00000565151 HSP90AB1P08238 724 aaKnown RBP19.97■□□□□ 0.79
USB1-210ENST00000565151 NFATC2IPQ8NCF5 419 aa19.97■□□□□ 0.79
USB1-210ENST00000565151 AK7Q96M32 723 aa19.97■□□□□ 0.79
USB1-210ENST00000565151 SIPA1L3O60292 1781 aaPredicted RBP19.96■□□□□ 0.79
USB1-210ENST00000565151 DIAPH1O60610 1272 aaKnown RBP19.96■□□□□ 0.79
USB1-210ENST00000565151 YY1P25490 414 aa19.96■□□□□ 0.79
USB1-210ENST00000565151 POLD1P28340 1107 aa19.96■□□□□ 0.79
USB1-210ENST00000565151 MRC1P22897 1456 aa19.96■□□□□ 0.79
USB1-210ENST00000565151 CABP4P57796 275 aa19.95■□□□□ 0.78
USB1-210ENST00000565151 MTHFSDQ2M296 383 aaKnown RBP19.95■□□□□ 0.78
USB1-210ENST00000565151 KLHL34Q8N239 644 aa19.95■□□□□ 0.78
USB1-210ENST00000565151 UBR2Q8IWV8 1755 aa19.94■□□□□ 0.78
USB1-210ENST00000565151 C1orf141Q5JVX7 400 aa19.94■□□□□ 0.78
USB1-210ENST00000565151 RBM42Q9BTD8 480 aaKnown RBP19.94■□□□□ 0.78
USB1-210ENST00000565151 KIAA1551Q9HCM1 1747 aa19.93■□□□□ 0.78
USB1-210ENST00000565151 GNPATO15228 680 aa19.93■□□□□ 0.78
USB1-210ENST00000565151 SSFA2P28290 1259 aa19.93■□□□□ 0.78
USB1-210ENST00000565151 AKAP4Q5JQC9 854 aa19.93■□□□□ 0.78
USB1-210ENST00000565151 FLAD1Q8NFF5 587 aa19.93■□□□□ 0.78
USB1-210ENST00000565151 KIF13BQ9NQT8 1826 aa19.92■□□□□ 0.78
USB1-210ENST00000565151 PTCD1O75127 700 aaKnown RBP19.91■□□□□ 0.78
USB1-210ENST00000565151 KCPQ6ZWJ8 1503 aa19.91■□□□□ 0.78
USB1-210ENST00000565151 RNMTO43148 476 aaKnown RBP19.9■□□□□ 0.78
USB1-210ENST00000565151 DCAF8L1A6NGE4 600 aa19.89■□□□□ 0.77
USB1-210ENST00000565151 YBX3P16989 372 aaKnown RBP eCLIP19.89■□□□□ 0.776e-6■□□□□ 10.9
USB1-210ENST00000565151 SLC52A2Q9HAB3 445 aa19.89■□□□□ 0.77
USB1-210ENST00000565151 N4BP2Q86UW6 1770 aaPredicted RBP19.88■□□□□ 0.77
USB1-210ENST00000565151 CNTNAP4Q9C0A0 1308 aa19.88■□□□□ 0.77
USB1-210ENST00000565151 SLC39A6Q13433 755 aa19.88■□□□□ 0.77
USB1-210ENST00000565151 RC3H1Q5TC82 1133 aaKnown RBP19.88■□□□□ 0.77
USB1-210ENST00000565151 U2SURPO15042 1029 aaKnown RBP19.87■□□□□ 0.77
USB1-210ENST00000565151 PPP2R1AP30153 589 aa19.87■□□□□ 0.77
USB1-210ENST00000565151 ARHGEF1Q92888 912 aaKnown RBP19.87■□□□□ 0.77
USB1-210ENST00000565151 HMGB2P26583 209 aaKnown RBP19.86■□□□□ 0.77
USB1-210ENST00000565151 GPR162Q16538 588 aa19.86■□□□□ 0.77
USB1-210ENST00000565151 PHACTR3Q96KR7 559 aa19.86■□□□□ 0.77
USB1-210ENST00000565151 DLG5Q8TDM6 1919 aa19.85■□□□□ 0.77
USB1-210ENST00000565151 RPS6KA4O75676 772 aa19.85■□□□□ 0.77
USB1-210ENST00000565151 INTS5Q6P9B9 1019 aaKnown RBP19.85■□□□□ 0.77
USB1-210ENST00000565151 IL17REQ8NFR9 667 aa19.85■□□□□ 0.77
USB1-210ENST00000565151 BRCA1P38398 1863 aaKnown RBP19.85■□□□□ 0.77
USB1-210ENST00000565151 CRKLP46109 303 aaKnown RBP19.84■□□□□ 0.77
USB1-210ENST00000565151 DNAJC10Q8IXB1 793 aa19.84■□□□□ 0.77
USB1-210ENST00000565151 RSPH6AQ9H0K4 717 aa19.84■□□□□ 0.77
USB1-210ENST00000565151 RTCBQ9Y3I0 505 aaKnown RBP19.84■□□□□ 0.77
USB1-210ENST00000565151 CD2APQ9Y5K6 639 aa19.84■□□□□ 0.77
USB1-210ENST00000565151 GYS1P13807 737 aa19.83■□□□□ 0.77
USB1-210ENST00000565151 TRAPPC3LQ5T215 181 aa19.83■□□□□ 0.77
USB1-210ENST00000565151 PELP1Q8IZL8 1130 aaKnown RBP19.82■□□□□ 0.76
USB1-210ENST00000565151 AFDNP55196 1824 aaKnown RBP19.81■□□□□ 0.76
USB1-210ENST00000565151 MMP10P09238 476 aa19.81■□□□□ 0.76
USB1-210ENST00000565151 ZNF784Q8NCA9 323 aaPredicted RBP19.81■□□□□ 0.76
USB1-210ENST00000565151 SRP68Q9UHB9 627 aaKnown RBP19.81■□□□□ 0.76
USB1-210ENST00000565151 PRKAR2BP31323 418 aa19.8■□□□□ 0.76
USB1-210ENST00000565151 CYP19A1P11511 503 aaPredicted RBP19.79■□□□□ 0.76
USB1-210ENST00000565151 ADRA2BP18089 450 aa19.79■□□□□ 0.76
USB1-210ENST00000565151 WWC3Q9ULE0 1092 aa19.79■□□□□ 0.76
USB1-210ENST00000565151 CEMIPQ8WUJ3 1361 aa19.78■□□□□ 0.76
USB1-210ENST00000565151 GNAT3A8MTJ3 354 aa19.77■□□□□ 0.76
USB1-210ENST00000565151 FKBP8Q14318 412 aa19.77■□□□□ 0.76
USB1-210ENST00000565151 PXDNLA1KZ92 1463 aa19.77■□□□□ 0.76
USB1-210ENST00000565151 SOS1Q07889 1333 aaPredicted RBP19.76■□□□□ 0.75
USB1-210ENST00000565151 RFC4P35249 363 aa19.76■□□□□ 0.75
USB1-210ENST00000565151 GAS2L2Q8NHY3 880 aa19.76■□□□□ 0.75
USB1-210ENST00000565151 C10orf71Q711Q0 1435 aa19.76■□□□□ 0.75
USB1-210ENST00000565151 USP42Q9H9J4 1324 aaKnown RBP19.76■□□□□ 0.75
USB1-210ENST00000565151 KCNQ3O43525 872 aa19.75■□□□□ 0.75
USB1-210ENST00000565151 NLGN1Q8N2Q7 840 aa19.75■□□□□ 0.75
USB1-210ENST00000565151 CFAP53Q96M91 514 aa19.75■□□□□ 0.75
USB1-210ENST00000565151 CCDC87Q9NVE4 849 aa19.75■□□□□ 0.75
USB1-210ENST00000565151 ZBTB1Q9Y2K1 713 aa19.75■□□□□ 0.75
USB1-210ENST00000565151 U2AF1L5P0DN76 240 aaPredicted RBP19.74■□□□□ 0.75
USB1-210ENST00000565151 U2AF1Q01081 240 aaKnown RBP eCLIP19.74■□□□□ 0.75
USB1-210ENST00000565151 DDR1Q08345 913 aa19.74■□□□□ 0.75
USB1-210ENST00000565151 ZNF496Q96IT1 587 aaPredicted RBP19.74■□□□□ 0.75
USB1-210ENST00000565151 NRXN2Q9P2S2 1712 aa19.73■□□□□ 0.75
USB1-210ENST00000565151 VSIG10Q8N0Z9 540 aa19.72■□□□□ 0.75
USB1-210ENST00000565151 BCL2L12Q9HB09 334 aa19.72■□□□□ 0.75
USB1-210ENST00000565151 ARFGEF1Q9Y6D6 1849 aa19.72■□□□□ 0.75
USB1-210ENST00000565151 TM4SF1P30408 202 aa19.71■□□□□ 0.75
USB1-210ENST00000565151 ZNF790Q6PG37 636 aa19.71■□□□□ 0.75
USB1-210ENST00000565151 HEG1Q9ULI3 1381 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms