RNA–Protein interactions for RNA: ENST00000564908.1

MSRB1-205, Transcript of methionine sulfoxide reductase B1, humanhuman

TSL 3 BASIC

Gene MSRB1, Length 550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB1-205ENST00000564908 MTHFSDQ2M296 383 aaKnown RBP17.36■□□□□ 0.37
MSRB1-205ENST00000564908 RBM42Q9BTD8 480 aaKnown RBP17.36■□□□□ 0.37
MSRB1-205ENST00000564908 U2SURPO15042 1029 aaKnown RBP17.35■□□□□ 0.37
MSRB1-205ENST00000564908 POLD1P28340 1107 aa17.35■□□□□ 0.37
MSRB1-205ENST00000564908 AK7Q96M32 723 aa17.35■□□□□ 0.37
MSRB1-205ENST00000564908 KDM6AO15550 1401 aaPredicted RBP17.35■□□□□ 0.37
MSRB1-205ENST00000564908 QSER1Q2KHR3 1735 aa17.35■□□□□ 0.37
MSRB1-205ENST00000564908 TAF1LQ8IZX4 1826 aa17.35■□□□□ 0.37
MSRB1-205ENST00000564908 TUBGCP6Q96RT7 1819 aa17.35■□□□□ 0.37
MSRB1-205ENST00000564908 DCAF8L1A6NGE4 600 aa17.34■□□□□ 0.37
MSRB1-205ENST00000564908 PPP2R1AP30153 589 aa17.34■□□□□ 0.37
MSRB1-205ENST00000564908 RNMTO43148 476 aaKnown RBP17.33■□□□□ 0.36
MSRB1-205ENST00000564908 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.32■□□□□ 0.36
MSRB1-205ENST00000564908 MSL1Q68DK7 614 aa17.32■□□□□ 0.36
MSRB1-205ENST00000564908 PTCD1O75127 700 aaKnown RBP17.31■□□□□ 0.36
MSRB1-205ENST00000564908 PHF14O94880 888 aa17.31■□□□□ 0.36
MSRB1-205ENST00000564908 CFAP53Q96M91 514 aa17.31■□□□□ 0.36
MSRB1-205ENST00000564908 C5P01031 1676 aa17.31■□□□□ 0.36
MSRB1-205ENST00000564908 SSFA2P28290 1259 aa17.3■□□□□ 0.36
MSRB1-205ENST00000564908 RC3H1Q5TC82 1133 aaKnown RBP17.3■□□□□ 0.36
MSRB1-205ENST00000564908 SLC52A2Q9HAB3 445 aa17.3■□□□□ 0.36
MSRB1-205ENST00000564908 COL3A1P02461 1466 aaPredicted RBP17.3■□□□□ 0.36
MSRB1-205ENST00000564908 C4BP0C0L5 1744 aa17.3■□□□□ 0.36
MSRB1-205ENST00000564908 GNPATO15228 680 aa17.29■□□□□ 0.36
MSRB1-205ENST00000564908 COL24A1Q17RW2 1714 aa17.28■□□□□ 0.36
MSRB1-205ENST00000564908 TRAPPC3LQ5T215 181 aa17.28■□□□□ 0.36
MSRB1-205ENST00000564908 KLHL34Q8N239 644 aa17.28■□□□□ 0.36
MSRB1-205ENST00000564908 PHACTR3Q96KR7 559 aa17.28■□□□□ 0.36
MSRB1-205ENST00000564908 NUDCQ9Y266 331 aa17.28■□□□□ 0.36
MSRB1-205ENST00000564908 MAP3K5Q99683 1374 aa17.28■□□□□ 0.36
MSRB1-205ENST00000564908 SLC39A6Q13433 755 aa17.27■□□□□ 0.36
MSRB1-205ENST00000564908 IL17REQ8NFR9 667 aa17.27■□□□□ 0.36
MSRB1-205ENST00000564908 RTCBQ9Y3I0 505 aaKnown RBP17.27■□□□□ 0.36
MSRB1-205ENST00000564908 RPS6KA4O75676 772 aa17.26■□□□□ 0.35
MSRB1-205ENST00000564908 ARHGEF1Q92888 912 aaKnown RBP17.26■□□□□ 0.35
MSRB1-205ENST00000564908 RSPH6AQ9H0K4 717 aa17.26■□□□□ 0.35
MSRB1-205ENST00000564908 UBR3Q6ZT12 1888 aa17.26■□□□□ 0.35
MSRB1-205ENST00000564908 SCN11AQ9UI33 1791 aa17.25■□□□□ 0.35
MSRB1-205ENST00000564908 U2AF1L5P0DN76 240 aaPredicted RBP17.25■□□□□ 0.35
MSRB1-205ENST00000564908 PRKAR2BP31323 418 aa17.25■□□□□ 0.35
MSRB1-205ENST00000564908 U2AF1Q01081 240 aaKnown RBP eCLIP17.25■□□□□ 0.35
MSRB1-205ENST00000564908 NLGN2Q8NFZ4 835 aa17.25■□□□□ 0.35
MSRB1-205ENST00000564908 GAS2L2Q8NHY3 880 aa17.25■□□□□ 0.35
MSRB1-205ENST00000564908 GNAT3A8MTJ3 354 aa17.24■□□□□ 0.35
MSRB1-205ENST00000564908 FCHSD2O94868 740 aa17.24■□□□□ 0.35
MSRB1-205ENST00000564908 DDX10Q13206 875 aaKnown RBP17.24■□□□□ 0.35
MSRB1-205ENST00000564908 MYH14Q7Z406 1995 aaKnown RBP17.24■□□□□ 0.35
MSRB1-205ENST00000564908 CNTNAP4Q9C0A0 1308 aa17.23■□□□□ 0.35
MSRB1-205ENST00000564908 YY1P25490 414 aa17.23■□□□□ 0.35
MSRB1-205ENST00000564908 UTRNP46939 3433 aa17.22■□□□□ 0.35
MSRB1-205ENST00000564908 CRKLP46109 303 aaKnown RBP17.22■□□□□ 0.35
MSRB1-205ENST00000564908 GPR162Q16538 588 aa17.22■□□□□ 0.35
MSRB1-205ENST00000564908 INTS5Q6P9B9 1019 aaKnown RBP17.22■□□□□ 0.35
MSRB1-205ENST00000564908 DNAJC10Q8IXB1 793 aa17.22■□□□□ 0.35
MSRB1-205ENST00000564908 CD2APQ9Y5K6 639 aa17.22■□□□□ 0.35
MSRB1-205ENST00000564908 ADRA2BP18089 450 aa17.21■□□□□ 0.35
MSRB1-205ENST00000564908 ZNF831Q5JPB2 1677 aa17.2■□□□□ 0.34
MSRB1-205ENST00000564908 RFC4P35249 363 aa17.2■□□□□ 0.34
MSRB1-205ENST00000564908 NLGN1Q8N2Q7 840 aa17.2■□□□□ 0.34
MSRB1-205ENST00000564908 CYP19A1P11511 503 aaPredicted RBP17.19■□□□□ 0.34
MSRB1-205ENST00000564908 TEFQ10587 303 aa17.19■□□□□ 0.34
MSRB1-205ENST00000564908 VIRMAQ69YN4 1812 aaKnown RBP17.19■□□□□ 0.34
MSRB1-205ENST00000564908 MMP10P09238 476 aa17.18■□□□□ 0.34
MSRB1-205ENST00000564908 GYS1P13807 737 aa17.18■□□□□ 0.34
MSRB1-205ENST00000564908 VSIG10Q8N0Z9 540 aa17.18■□□□□ 0.34
MSRB1-205ENST00000564908 ZNF790Q6PG37 636 aa17.17■□□□□ 0.34
MSRB1-205ENST00000564908 PELP1Q8IZL8 1130 aaKnown RBP17.17■□□□□ 0.34
MSRB1-205ENST00000564908 RALBP1Q15311 655 aa17.16■□□□□ 0.34
MSRB1-205ENST00000564908 TTC5Q8N0Z6 440 aa17.16■□□□□ 0.34
MSRB1-205ENST00000564908 ZNF496Q96IT1 587 aaPredicted RBP17.16■□□□□ 0.34
MSRB1-205ENST00000564908 CCDC87Q9NVE4 849 aa17.16■□□□□ 0.34
MSRB1-205ENST00000564908 SRP68Q9UHB9 627 aaKnown RBP17.16■□□□□ 0.34
MSRB1-205ENST00000564908 MRC1P22897 1456 aa17.16■□□□□ 0.34
MSRB1-205ENST00000564908 ADAMTS7Q9UKP4 1686 aa17.16■□□□□ 0.34
MSRB1-205ENST00000564908 COL5A3P25940 1745 aaPredicted RBP17.16■□□□□ 0.34
MSRB1-205ENST00000564908 KCNQ3O43525 872 aa17.15■□□□□ 0.34
MSRB1-205ENST00000564908 CEMIPQ8WUJ3 1361 aa17.15■□□□□ 0.34
MSRB1-205ENST00000564908 GOLGB1Q14789 3259 aaKnown RBP17.14■□□□□ 0.33
MSRB1-205ENST00000564908 BTBD11A6QL63 1104 aa17.14■□□□□ 0.33
MSRB1-205ENST00000564908 YBX3P16989 372 aaKnown RBP eCLIP17.14■□□□□ 0.33
MSRB1-205ENST00000564908 DCTN1Q14203 1278 aa17.14■□□□□ 0.33
MSRB1-205ENST00000564908 MCM10Q7L590 875 aa17.14■□□□□ 0.33
MSRB1-205ENST00000564908 RTF1Q92541 710 aaKnown RBP17.14■□□□□ 0.33
MSRB1-205ENST00000564908 PLEKHF1Q96S99 279 aa17.14■□□□□ 0.33
MSRB1-205ENST00000564908 HTATSF1O43719 755 aaKnown RBP17.13■□□□□ 0.33
MSRB1-205ENST00000564908 FKBP8Q14318 412 aa17.13■□□□□ 0.33
MSRB1-205ENST00000564908 KCPQ6ZWJ8 1503 aa17.12■□□□□ 0.33
MSRB1-205ENST00000564908 GRIN3BO60391 1043 aa17.12■□□□□ 0.33
MSRB1-205ENST00000564908 STARD3NLO95772 234 aa17.12■□□□□ 0.33
MSRB1-205ENST00000564908 TEX13AQ9BXU3 409 aaPredicted RBP17.12■□□□□ 0.33
MSRB1-205ENST00000564908 ZBTB1Q9Y2K1 713 aa17.12■□□□□ 0.33
MSRB1-205ENST00000564908 PARP3Q9Y6F1 533 aa17.12■□□□□ 0.33
MSRB1-205ENST00000564908 SOS1Q07889 1333 aaPredicted RBP17.12■□□□□ 0.33
MSRB1-205ENST00000564908 TJP1Q07157 1748 aa17.11■□□□□ 0.33
MSRB1-205ENST00000564908 ZPR1O75312 459 aa17.11■□□□□ 0.33
MSRB1-205ENST00000564908 CANXP27824 592 aaKnown RBP17.11■□□□□ 0.33
MSRB1-205ENST00000564908 TM4SF1P30408 202 aa17.11■□□□□ 0.33
MSRB1-205ENST00000564908 FMNL2Q96PY5 1086 aa17.11■□□□□ 0.33
MSRB1-205ENST00000564908 USP42Q9H9J4 1324 aaKnown RBP17.11■□□□□ 0.33
MSRB1-205ENST00000564908 CHD4Q14839 1912 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 93 ms