RNA–Protein interactions for RNA: ENST00000564793.1

CFDP1-204, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 457 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-204ENST00000564793 DOLKQ9UPQ8 538 aa8.22□□□□□ -1.09
CFDP1-204ENST00000564793 PCDHB11Q9Y5F2 797 aa8.22□□□□□ -1.09
CFDP1-204ENST00000564793 V9GY48 417 aaPredicted RBP8.22□□□□□ -1.09
CFDP1-204ENST00000564793 FMN1Q68DA7 1419 aa8.21□□□□□ -1.09
CFDP1-204ENST00000564793 OXLD1Q5BKU9 147 aa8.21□□□□□ -1.1
CFDP1-204ENST00000564793 TRAF7Q6Q0C0 670 aa8.21□□□□□ -1.1
CFDP1-204ENST00000564793 SEPT12Q8IYM1 358 aa8.21□□□□□ -1.1
CFDP1-204ENST00000564793 CDK15Q96Q40 435 aa8.21□□□□□ -1.1
CFDP1-204ENST00000564793 KDM5CP41229 1560 aa8.21□□□□□ -1.1
CFDP1-204ENST00000564793 HECW2Q9P2P5 1572 aa8.21□□□□□ -1.1
CFDP1-204ENST00000564793 FYCO1Q9BQS8 1478 aa8.2□□□□□ -1.1
CFDP1-204ENST00000564793 MAP7D1Q3KQU3 841 aa8.2□□□□□ -1.1
CFDP1-204ENST00000564793 PKD2L1Q9P0L9 805 aa8.2□□□□□ -1.1
CFDP1-204ENST00000564793 FER1L4A9Z1Z3 1794 aa8.2□□□□□ -1.1
CFDP1-204ENST00000564793 FANCAO15360 1455 aa8.19□□□□□ -1.1
CFDP1-204ENST00000564793 ADH1CP00326 375 aa8.19□□□□□ -1.1
CFDP1-204ENST00000564793 EML3Q32P44 896 aa8.19□□□□□ -1.1
CFDP1-204ENST00000564793 KANK4Q5T7N3 995 aaPredicted RBP8.19□□□□□ -1.1
CFDP1-204ENST00000564793 MPNDQ8N594 471 aa8.19□□□□□ -1.1
CFDP1-204ENST00000564793 CDCA7Q9BWT1 371 aaPredicted RBP8.19□□□□□ -1.1
CFDP1-204ENST00000564793 VRTNQ9H8Y1 702 aa8.19□□□□□ -1.1
CFDP1-204ENST00000564793 MKRN1Q9UHC7 482 aaKnown RBP8.19□□□□□ -1.1
CFDP1-204ENST00000564793 ABCC1P33527 1531 aa8.19□□□□□ -1.1
CFDP1-204ENST00000564793 RIMS1Q86UR5 1692 aaKnown RBP8.18□□□□□ -1.1
CFDP1-204ENST00000564793 ERVH48-1M5A8F1 160 aa8.18□□□□□ -1.1
CFDP1-204ENST00000564793 GRM5P41594 1212 aa8.18□□□□□ -1.1
CFDP1-204ENST00000564793 RETREG2Q8NC44 543 aa8.18□□□□□ -1.1
CFDP1-204ENST00000564793 PHLDB1Q86UU1 1377 aa8.18□□□□□ -1.1
CFDP1-204ENST00000564793 CCDC18Q5T9S5 1454 aa8.18□□□□□ -1.1
CFDP1-204ENST00000564793 ZFYVE16Q7Z3T8 1539 aa8.18□□□□□ -1.1
CFDP1-204ENST00000564793 ABCA6Q8N139 1617 aa8.18□□□□□ -1.1
CFDP1-204ENST00000564793 TNFRSF10AO00220 468 aa8.17□□□□□ -1.1
CFDP1-204ENST00000564793 ALDH1A1P00352 501 aa8.17□□□□□ -1.1
CFDP1-204ENST00000564793 FAM9AQ8IZU1 332 aaPredicted RBP8.17□□□□□ -1.1
CFDP1-204ENST00000564793 POGZQ7Z3K3 1410 aa8.17□□□□□ -1.1
CFDP1-204ENST00000564793 CASKIN1Q8WXD9 1431 aa8.17□□□□□ -1.1
CFDP1-204ENST00000564793 REREQ9P2R6 1566 aa8.17□□□□□ -1.1
CFDP1-204ENST00000564793 LZTS3O60299 673 aaPredicted RBP8.16□□□□□ -1.1
CFDP1-204ENST00000564793 ATG7O95352 703 aa8.16□□□□□ -1.1
CFDP1-204ENST00000564793 NR3C2P08235 984 aa8.16□□□□□ -1.1
CFDP1-204ENST00000564793 TROQ12816 1431 aaPredicted RBP8.16□□□□□ -1.1
CFDP1-204ENST00000564793 CCDC125Q86Z20 511 aa8.16□□□□□ -1.1
CFDP1-204ENST00000564793 TMPRSS4Q9NRS4 437 aa8.16□□□□□ -1.1
CFDP1-204ENST00000564793 ACIN1Q9UKV3 1341 aaKnown RBP8.16□□□□□ -1.1
CFDP1-204ENST00000564793 DIP2CQ9Y2E4 1556 aa8.16□□□□□ -1.1
CFDP1-204ENST00000564793 ATP5J2-PTCD1G3V325 749 aa8.15□□□□□ -1.1
CFDP1-204ENST00000564793 GDF9O60383 454 aa8.15□□□□□ -1.1
CFDP1-204ENST00000564793 RASA1P20936 1047 aa8.15□□□□□ -1.1
CFDP1-204ENST00000564793 SCTRP47872 440 aa8.15□□□□□ -1.1
CFDP1-204ENST00000564793 NR5A1Q13285 461 aa8.15□□□□□ -1.1
CFDP1-204ENST00000564793 CRTC2Q53ET0 693 aaPredicted RBP8.15□□□□□ -1.1
CFDP1-204ENST00000564793 CCDC116Q8IYX3 515 aa8.15□□□□□ -1.1
CFDP1-204ENST00000564793 NOD1Q9Y239 953 aa8.15□□□□□ -1.1
CFDP1-204ENST00000564793 KIDINS220Q9ULH0 1771 aa8.15□□□□□ -1.11
CFDP1-204ENST00000564793 SAMD9LQ8IVG5 1584 aa8.14□□□□□ -1.11
CFDP1-204ENST00000564793 DENND4BO75064 1496 aaPredicted RBP8.14□□□□□ -1.11
CFDP1-204ENST00000564793 AKNAQ7Z591 1439 aa8.14□□□□□ -1.11
CFDP1-204ENST00000564793 USP17L15C9J2P7 530 aa8.14□□□□□ -1.11
CFDP1-204ENST00000564793 USP17L10C9JJH3 530 aa8.14□□□□□ -1.11
CFDP1-204ENST00000564793 USP17L13C9JLJ4 530 aa8.14□□□□□ -1.11
CFDP1-204ENST00000564793 USP17L12C9JPN9 530 aa8.14□□□□□ -1.11
CFDP1-204ENST00000564793 USP17L11C9JVI0 530 aa8.14□□□□□ -1.11
CFDP1-204ENST00000564793 USP17L21D6R901 530 aa8.14□□□□□ -1.11
CFDP1-204ENST00000564793 USP17L18D6R9N7 530 aa8.14□□□□□ -1.11
CFDP1-204ENST00000564793 USP17L22D6RA61 530 aa8.14□□□□□ -1.11
CFDP1-204ENST00000564793 USP17L17D6RBQ6 530 aa8.14□□□□□ -1.11
CFDP1-204ENST00000564793 USP17L19D6RCP7 530 aa8.14□□□□□ -1.11
CFDP1-204ENST00000564793 USP17L20D6RJB6 530 aa8.14□□□□□ -1.11
CFDP1-204ENST00000564793 DHX9Q08211 1270 aaKnown RBP8.14□□□□□ -1.11
CFDP1-204ENST00000564793 USP17L24Q0WX57 530 aa8.14□□□□□ -1.11
CFDP1-204ENST00000564793 PPP1R26Q5T8A7 1209 aaPredicted RBP8.14□□□□□ -1.11
CFDP1-204ENST00000564793 TRIM67Q6ZTA4 783 aa8.14□□□□□ -1.11
CFDP1-204ENST00000564793 SNIP1Q8TAD8 396 aaKnown RBP8.14□□□□□ -1.11
CFDP1-204ENST00000564793 ZNF594Q96JF6 807 aaPredicted RBP8.14□□□□□ -1.11
CFDP1-204ENST00000564793 CYLDQ9NQC7 956 aa8.14□□□□□ -1.11
CFDP1-204ENST00000564793 WASF2Q9Y6W5 498 aa8.14□□□□□ -1.11
CFDP1-204ENST00000564793 INO80Q9ULG1 1556 aaPredicted RBP8.14□□□□□ -1.11
CFDP1-204ENST00000564793 PLCH2O75038 1416 aa8.13□□□□□ -1.11
CFDP1-204ENST00000564793 TTC24A2A3L6 582 aaPredicted RBP8.13□□□□□ -1.11
CFDP1-204ENST00000564793 FAM196BA6NMK8 535 aa8.13□□□□□ -1.11
CFDP1-204ENST00000564793 CSB-PGBD3P0DP91 1061 aa8.13□□□□□ -1.11
CFDP1-204ENST00000564793 GTF2IP78347 998 aa8.13□□□□□ -1.11
CFDP1-204ENST00000564793 CLDN10P78369 228 aa8.13□□□□□ -1.11
CFDP1-204ENST00000564793 NNTQ13423 1086 aa8.13□□□□□ -1.11
CFDP1-204ENST00000564793 LARP1Q6PKG0 1096 aaKnown RBP8.13□□□□□ -1.11
CFDP1-204ENST00000564793 TRIM50Q86XT4 487 aa8.13□□□□□ -1.11
CFDP1-204ENST00000564793 CYP4X1Q8N118 509 aa8.13□□□□□ -1.11
CFDP1-204ENST00000564793 OGFOD1Q8N543 542 aa8.13□□□□□ -1.11
CFDP1-204ENST00000564793 ZNF784Q8NCA9 323 aaPredicted RBP8.13□□□□□ -1.11
CFDP1-204ENST00000564793 TIAM1Q13009 1591 aa8.13□□□□□ -1.11
CFDP1-204ENST00000564793 ARHGAP5Q13017 1502 aa8.13□□□□□ -1.11
CFDP1-204ENST00000564793 MAGI2Q86UL8 1455 aa8.13□□□□□ -1.11
CFDP1-204ENST00000564793 YEATS2Q9ULM3 1422 aa8.12□□□□□ -1.11
CFDP1-204ENST00000564793 J3QL48 77 aa8.12□□□□□ -1.11
CFDP1-204ENST00000564793 MYCP01106 439 aaPredicted RBP8.12□□□□□ -1.11
CFDP1-204ENST00000564793 ERVK-9P63128 1117 aa8.12□□□□□ -1.11
CFDP1-204ENST00000564793 USP4Q13107 963 aa8.12□□□□□ -1.11
CFDP1-204ENST00000564793 SIRT1Q96EB6 747 aa8.12□□□□□ -1.11
CFDP1-204ENST00000564793 DNAAF2Q9NVR5 837 aaKnown RBP8.12□□□□□ -1.11
CFDP1-204ENST00000564793 ZMIZ1Q9ULJ6 1067 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms