RNA–Protein interactions for RNA: ENST00000564752.1

CLN6-204, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 900 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-204ENST00000564752 SSFA2P28290 1259 aa25.25■■□□□ 1.63
CLN6-204ENST00000564752 DCAF5Q96JK2 942 aa25.25■■□□□ 1.63
CLN6-204ENST00000564752 CD2APQ9Y5K6 639 aa25.25■■□□□ 1.63
CLN6-204ENST00000564752 AMOTQ4VCS5 1084 aa25.24■■□□□ 1.63
CLN6-204ENST00000564752 KIF7Q2M1P5 1343 aa25.23■■□□□ 1.63
CLN6-204ENST00000564752 SENP3-EIF4A1A0A087X0R7 540 aa25.23■■□□□ 1.63
CLN6-204ENST00000564752 YBX3P16989 372 aaKnown RBP eCLIP25.22■■□□□ 1.631e-7■■□□□ 13.8
CLN6-204ENST00000564752 AMER1Q5JTC6 1135 aaPredicted RBP25.22■■□□□ 1.63
CLN6-204ENST00000564752 ZNF530Q6P9A1 599 aaPredicted RBP25.22■■□□□ 1.63
CLN6-204ENST00000564752 AEBP1Q8IUX7 1158 aa25.22■■□□□ 1.63
CLN6-204ENST00000564752 C1QTNF8P60827 252 aa25.21■■□□□ 1.63
CLN6-204ENST00000564752 GNPATO15228 680 aa25.2■■□□□ 1.62
CLN6-204ENST00000564752 GRIN3BO60391 1043 aa25.2■■□□□ 1.62
CLN6-204ENST00000564752 IL13P35225 146 aa25.2■■□□□ 1.62
CLN6-204ENST00000564752 SULT6B1Q6IMI4 303 aa25.19■■□□□ 1.62
CLN6-204ENST00000564752 SLC4A9Q96Q91 983 aa25.19■■□□□ 1.62
CLN6-204ENST00000564752 MTHFSP49914 203 aa25.17■■□□□ 1.62
CLN6-204ENST00000564752 CABP4P57796 275 aa25.17■■□□□ 1.62
CLN6-204ENST00000564752 RBM42Q9BTD8 480 aaKnown RBP25.17■■□□□ 1.62
CLN6-204ENST00000564752 UBR3Q6ZT12 1888 aa25.17■■□□□ 1.62
CLN6-204ENST00000564752 KDRP35968 1356 aa25.17■■□□□ 1.62
CLN6-204ENST00000564752 KDM6AO15550 1401 aaPredicted RBP25.16■■□□□ 1.62
CLN6-204ENST00000564752 C1orf141Q5JVX7 400 aa25.15■■□□□ 1.62
CLN6-204ENST00000564752 PER1O15534 1290 aaPredicted RBP25.14■■□□□ 1.62
CLN6-204ENST00000564752 RC3H1Q5TC82 1133 aaKnown RBP25.14■■□□□ 1.62
CLN6-204ENST00000564752 GIGYF1O75420 1035 aaPredicted RBP25.13■■□□□ 1.61
CLN6-204ENST00000564752 TRAPPC3LQ5T215 181 aa25.13■■□□□ 1.61
CLN6-204ENST00000564752 RTCBQ9Y3I0 505 aaKnown RBP25.13■■□□□ 1.61
CLN6-204ENST00000564752 NFATC2IPQ8NCF5 419 aa25.12■■□□□ 1.61
CLN6-204ENST00000564752 CNTNAP4Q9C0A0 1308 aa25.1■■□□□ 1.61
CLN6-204ENST00000564752 ADRA2BP18089 450 aa25.09■■□□□ 1.61
CLN6-204ENST00000564752 ARHGEF1Q92888 912 aaKnown RBP25.09■■□□□ 1.61
CLN6-204ENST00000564752 PTCD1O75127 700 aaKnown RBP25.08■■□□□ 1.61
CLN6-204ENST00000564752 RPS6KA4O75676 772 aa25.08■■□□□ 1.61
CLN6-204ENST00000564752 MMP10P09238 476 aa25.08■■□□□ 1.61
CLN6-204ENST00000564752 AKAP4Q5JQC9 854 aa25.07■■□□□ 1.6
CLN6-204ENST00000564752 NLGN1Q8N2Q7 840 aa25.07■■□□□ 1.6
CLN6-204ENST00000564752 CC2D1BQ5T0F9 858 aaKnown RBP25.06■■□□□ 1.6
CLN6-204ENST00000564752 ZNF831Q5JPB2 1677 aa25.06■■□□□ 1.6
CLN6-204ENST00000564752 RFC4P35249 363 aa25.04■■□□□ 1.6
CLN6-204ENST00000564752 HMOX1P09601 288 aa25.03■■□□□ 1.6
CLN6-204ENST00000564752 GYS1P13807 737 aa25.03■■□□□ 1.6
CLN6-204ENST00000564752 LGR6Q9HBX8 967 aa25.03■■□□□ 1.6
CLN6-204ENST00000564752 DIAPH1O60610 1272 aaKnown RBP25.02■■□□□ 1.6
CLN6-204ENST00000564752 CRKLP46109 303 aaKnown RBP25.02■■□□□ 1.6
CLN6-204ENST00000564752 SLC52A2Q9HAB3 445 aa25.02■■□□□ 1.6
CLN6-204ENST00000564752 WWC3Q9ULE0 1092 aa25.01■■□□□ 1.59
CLN6-204ENST00000564752 RNMTO43148 476 aaKnown RBP24.99■■□□□ 1.59
CLN6-204ENST00000564752 TGFB2P61812 414 aa24.99■■□□□ 1.59
CLN6-204ENST00000564752 MTHFSDQ2M296 383 aaKnown RBP24.99■■□□□ 1.59
CLN6-204ENST00000564752 NPC1L1Q9UHC9 1359 aa24.99■■□□□ 1.59
CLN6-204ENST00000564752 COL5A3P25940 1745 aaPredicted RBP24.98■■□□□ 1.59
CLN6-204ENST00000564752 INTS5Q6P9B9 1019 aaKnown RBP24.97■■□□□ 1.59
CLN6-204ENST00000564752 ATP10DQ9P241 1426 aa24.96■■□□□ 1.59
CLN6-204ENST00000564752 CCDC87Q9NVE4 849 aa24.96■■□□□ 1.59
CLN6-204ENST00000564752 PARP3Q9Y6F1 533 aa24.96■■□□□ 1.59
CLN6-204ENST00000564752 MYH14Q7Z406 1995 aaKnown RBP24.96■■□□□ 1.59
CLN6-204ENST00000564752 A0A0G2JLW4 131 aa24.94■■□□□ 1.58
CLN6-204ENST00000564752 SLC39A6Q13433 755 aa24.94■■□□□ 1.58
CLN6-204ENST00000564752 DNAJC10Q8IXB1 793 aa24.94■■□□□ 1.58
CLN6-204ENST00000564752 SRP68Q9UHB9 627 aaKnown RBP24.94■■□□□ 1.58
CLN6-204ENST00000564752 PXDNLA1KZ92 1463 aa24.94■■□□□ 1.58
CLN6-204ENST00000564752 CICQ96RK0 1608 aaPredicted RBP24.94■■□□□ 1.58
CLN6-204ENST00000564752 ADCY9O60503 1353 aa24.93■■□□□ 1.58
CLN6-204ENST00000564752 SCN11AQ9UI33 1791 aa24.93■■□□□ 1.58
CLN6-204ENST00000564752 USP42Q9H9J4 1324 aaKnown RBP24.93■■□□□ 1.58
CLN6-204ENST00000564752 CNGB1Q14028 1251 aaPredicted RBP24.93■■□□□ 1.58
CLN6-204ENST00000564752 C10orf71Q711Q0 1435 aa24.93■■□□□ 1.58
CLN6-204ENST00000564752 FKBP8Q14318 412 aa24.92■■□□□ 1.58
CLN6-204ENST00000564752 CEP350Q5VT06 3117 aa24.92■■□□□ 1.58
CLN6-204ENST00000564752 MRC1P22897 1456 aa24.91■■□□□ 1.58
CLN6-204ENST00000564752 CYP19A1P11511 503 aaPredicted RBP24.9■■□□□ 1.58
CLN6-204ENST00000564752 DPEP1P16444 411 aa24.9■■□□□ 1.58
CLN6-204ENST00000564752 GPBP1L1Q9HC44 474 aaPredicted RBP24.9■■□□□ 1.58
CLN6-204ENST00000564752 U2SURPO15042 1029 aaKnown RBP24.89■■□□□ 1.58
CLN6-204ENST00000564752 BCS1LQ9Y276 419 aa24.89■■□□□ 1.58
CLN6-204ENST00000564752 TJP1Q07157 1748 aa24.89■■□□□ 1.57
CLN6-204ENST00000564752 COL3A1P02461 1466 aaPredicted RBP24.89■■□□□ 1.57
CLN6-204ENST00000564752 KIF13BQ9NQT8 1826 aa24.89■■□□□ 1.57
CLN6-204ENST00000564752 VSIG10Q8N0Z9 540 aa24.88■■□□□ 1.57
CLN6-204ENST00000564752 ZNF526Q8TF50 670 aaPredicted RBP24.88■■□□□ 1.57
CLN6-204ENST00000564752 SOS1Q07889 1333 aaPredicted RBP24.87■■□□□ 1.57
CLN6-204ENST00000564752 C4AP0C0L4 1744 aa24.87■■□□□ 1.57
CLN6-204ENST00000564752 KCNA3P22001 575 aa24.87■■□□□ 1.57
CLN6-204ENST00000564752 TM4SF1P30408 202 aa24.87■■□□□ 1.57
CLN6-204ENST00000564752 DDR1Q08345 913 aa24.87■■□□□ 1.57
CLN6-204ENST00000564752 ZPR1O75312 459 aa24.86■■□□□ 1.57
CLN6-204ENST00000564752 USPL1Q5W0Q7 1092 aa24.85■■□□□ 1.57
CLN6-204ENST00000564752 IL17REQ8NFR9 667 aa24.85■■□□□ 1.57
CLN6-204ENST00000564752 GAS2L2Q8NHY3 880 aa24.85■■□□□ 1.57
CLN6-204ENST00000564752 KCPQ6ZWJ8 1503 aa24.85■■□□□ 1.57
CLN6-204ENST00000564752 KIAA1551Q9HCM1 1747 aa24.84■■□□□ 1.57
CLN6-204ENST00000564752 GNAT3A8MTJ3 354 aa24.84■■□□□ 1.57
CLN6-204ENST00000564752 POLRMTO00411 1230 aaKnown RBP24.84■■□□□ 1.57
CLN6-204ENST00000564752 ZBTB1Q9Y2K1 713 aa24.84■■□□□ 1.57
CLN6-204ENST00000564752 ADAMTS7Q9UKP4 1686 aa24.84■■□□□ 1.57
CLN6-204ENST00000564752 FCHSD2O94868 740 aa24.83■■□□□ 1.57
CLN6-204ENST00000564752 NARFQ9UHQ1 456 aa24.83■■□□□ 1.57
CLN6-204ENST00000564752 ARHGAP27Q6ZUM4 889 aa24.82■■□□□ 1.56
CLN6-204ENST00000564752 TTC5Q8N0Z6 440 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms