RNA–Protein interactions for RNA: ENST00000564738.5

NEIL1-205, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 612 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-205ENST00000564738 U2AF1Q01081 240 aaKnown RBP eCLIP25.29■■□□□ 1.64
NEIL1-205ENST00000564738 ITPK1Q13572 414 aa25.29■■□□□ 1.64
NEIL1-205ENST00000564738 COL23A1Q86Y22 540 aaPredicted RBP25.29■■□□□ 1.64
NEIL1-205ENST00000564738 LINC00116Q8NCU8 138 aa25.29■■□□□ 1.64
NEIL1-205ENST00000564738 PHACTR3Q96KR7 559 aa25.28■■□□□ 1.64
NEIL1-205ENST00000564738 SLC4A9Q96Q91 983 aa25.28■■□□□ 1.64
NEIL1-205ENST00000564738 PRKAR2BP31323 418 aa25.27■■□□□ 1.64
NEIL1-205ENST00000564738 AMIGO3Q86WK7 504 aa25.26■■□□□ 1.63
NEIL1-205ENST00000564738 RSPH6AQ9H0K4 717 aa25.26■■□□□ 1.63
NEIL1-205ENST00000564738 PTCD1O75127 700 aaKnown RBP25.25■■□□□ 1.63
NEIL1-205ENST00000564738 AK7Q96M32 723 aa25.25■■□□□ 1.63
NEIL1-205ENST00000564738 SGIP1Q9BQI5 828 aa25.25■■□□□ 1.63
NEIL1-205ENST00000564738 PHF14O94880 888 aa25.23■■□□□ 1.63
NEIL1-205ENST00000564738 SLC16A10Q8TF71 515 aa25.23■■□□□ 1.63
NEIL1-205ENST00000564738 SLC52A2Q9HAB3 445 aa25.23■■□□□ 1.63
NEIL1-205ENST00000564738 SLC39A6Q13433 755 aa25.22■■□□□ 1.63
NEIL1-205ENST00000564738 GAS2L2Q8NHY3 880 aa25.22■■□□□ 1.63
NEIL1-205ENST00000564738 TUBGCP6Q96RT7 1819 aa25.21■■□□□ 1.63
NEIL1-205ENST00000564738 C5P01031 1676 aa25.21■■□□□ 1.63
NEIL1-205ENST00000564738 MSL1Q68DK7 614 aa25.21■■□□□ 1.63
NEIL1-205ENST00000564738 RALBP1Q15311 655 aa25.2■■□□□ 1.62
NEIL1-205ENST00000564738 IL17REQ8NFR9 667 aa25.2■■□□□ 1.62
NEIL1-205ENST00000564738 TAF1LQ8IZX4 1826 aa25.19■■□□□ 1.62
NEIL1-205ENST00000564738 GNAT3A8MTJ3 354 aa25.19■■□□□ 1.62
NEIL1-205ENST00000564738 HMGB2P26583 209 aaKnown RBP25.19■■□□□ 1.62
NEIL1-205ENST00000564738 ARXQ96QS3 562 aa25.19■■□□□ 1.62
NEIL1-205ENST00000564738 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.18■■□□□ 1.62
NEIL1-205ENST00000564738 GNPATO15228 680 aa25.18■■□□□ 1.62
NEIL1-205ENST00000564738 FCHSD2O94868 740 aa25.18■■□□□ 1.62
NEIL1-205ENST00000564738 C4BP0C0L5 1744 aa25.17■■□□□ 1.62
NEIL1-205ENST00000564738 FLAD1Q8NFF5 587 aa25.17■■□□□ 1.62
NEIL1-205ENST00000564738 FHDC1Q9C0D6 1143 aaPredicted RBP25.17■■□□□ 1.62
NEIL1-205ENST00000564738 SCN11AQ9UI33 1791 aa25.17■■□□□ 1.62
NEIL1-205ENST00000564738 MAP3K5Q99683 1374 aa25.16■■□□□ 1.62
NEIL1-205ENST00000564738 POLD1P28340 1107 aa25.15■■□□□ 1.62
NEIL1-205ENST00000564738 QSER1Q2KHR3 1735 aa25.15■■□□□ 1.62
NEIL1-205ENST00000564738 KLHL34Q8N239 644 aa25.14■■□□□ 1.62
NEIL1-205ENST00000564738 SYT17Q9BSW7 474 aa25.13■■□□□ 1.61
NEIL1-205ENST00000564738 SSFA2P28290 1259 aa25.12■■□□□ 1.61
NEIL1-205ENST00000564738 TEFQ10587 303 aa25.12■■□□□ 1.61
NEIL1-205ENST00000564738 DNAJC10Q8IXB1 793 aa25.12■■□□□ 1.61
NEIL1-205ENST00000564738 DCTN1Q14203 1278 aa25.11■■□□□ 1.61
NEIL1-205ENST00000564738 RTCBQ9Y3I0 505 aaKnown RBP25.11■■□□□ 1.61
NEIL1-205ENST00000564738 RC3H1Q5TC82 1133 aaKnown RBP25.1■■□□□ 1.61
NEIL1-205ENST00000564738 MCM10Q7L590 875 aa25.1■■□□□ 1.61
NEIL1-205ENST00000564738 CRKLP46109 303 aaKnown RBP25.09■■□□□ 1.61
NEIL1-205ENST00000564738 TRAPPC3LQ5T215 181 aa25.09■■□□□ 1.61
NEIL1-205ENST00000564738 MYBBP1AQ9BQG0 1328 aaKnown RBP25.09■■□□□ 1.61
NEIL1-205ENST00000564738 MRC1P22897 1456 aa25.09■■□□□ 1.61
NEIL1-205ENST00000564738 RPS6KA4O75676 772 aa25.08■■□□□ 1.61
NEIL1-205ENST00000564738 CNTNAP4Q9C0A0 1308 aa25.08■■□□□ 1.6
NEIL1-205ENST00000564738 UBR3Q6ZT12 1888 aa25.07■■□□□ 1.6
NEIL1-205ENST00000564738 KCNQ3O43525 872 aa25.07■■□□□ 1.6
NEIL1-205ENST00000564738 RTF1Q92541 710 aaKnown RBP25.07■■□□□ 1.6
NEIL1-205ENST00000564738 ARHGEF1Q92888 912 aaKnown RBP25.07■■□□□ 1.6
NEIL1-205ENST00000564738 PLEKHF1Q96S99 279 aa25.07■■□□□ 1.6
NEIL1-205ENST00000564738 TTC5Q8N0Z6 440 aa25.06■■□□□ 1.6
NEIL1-205ENST00000564738 VIRMAQ69YN4 1812 aaKnown RBP25.06■■□□□ 1.6
NEIL1-205ENST00000564738 ADAMTS7Q9UKP4 1686 aa25.06■■□□□ 1.6
NEIL1-205ENST00000564738 ZNF316A6NFI3 1004 aaPredicted RBP25.05■■□□□ 1.6
NEIL1-205ENST00000564738 NEFMP07197 916 aa25.05■■□□□ 1.6
NEIL1-205ENST00000564738 INTS5Q6P9B9 1019 aaKnown RBP25.05■■□□□ 1.6
NEIL1-205ENST00000564738 PRKRIP1Q9H875 184 aaPredicted RBP25.05■■□□□ 1.6
NEIL1-205ENST00000564738 CEMIPQ8WUJ3 1361 aa25.05■■□□□ 1.6
NEIL1-205ENST00000564738 BTBD11A6QL63 1104 aa25.04■■□□□ 1.6
NEIL1-205ENST00000564738 ZNF790Q6PG37 636 aa25.04■■□□□ 1.6
NEIL1-205ENST00000564738 CYP19A1P11511 503 aaPredicted RBP25.03■■□□□ 1.6
NEIL1-205ENST00000564738 ZNF496Q96IT1 587 aaPredicted RBP25.03■■□□□ 1.6
NEIL1-205ENST00000564738 MYH14Q7Z406 1995 aaKnown RBP25.02■■□□□ 1.6
NEIL1-205ENST00000564738 KCPQ6ZWJ8 1503 aa25.02■■□□□ 1.6
NEIL1-205ENST00000564738 RFC4P35249 363 aa25.01■■□□□ 1.59
NEIL1-205ENST00000564738 NLGN2Q8NFZ4 835 aa25.01■■□□□ 1.59
NEIL1-205ENST00000564738 CCDC87Q9NVE4 849 aa25.01■■□□□ 1.59
NEIL1-205ENST00000564738 ZNF831Q5JPB2 1677 aa25.01■■□□□ 1.59
NEIL1-205ENST00000564738 COL24A1Q17RW2 1714 aa25■■□□□ 1.59
NEIL1-205ENST00000564738 DCAF8L1A6NGE4 600 aa25■■□□□ 1.59
NEIL1-205ENST00000564738 NFE2L2Q16236 605 aa25■■□□□ 1.59
NEIL1-205ENST00000564738 SRP68Q9UHB9 627 aaKnown RBP25■■□□□ 1.59
NEIL1-205ENST00000564738 COL5A3P25940 1745 aaPredicted RBP25■■□□□ 1.59
NEIL1-205ENST00000564738 TJP1Q07157 1748 aa25■■□□□ 1.59
NEIL1-205ENST00000564738 HTATSF1O43719 755 aaKnown RBP24.99■■□□□ 1.59
NEIL1-205ENST00000564738 VSIG10Q8N0Z9 540 aa24.99■■□□□ 1.59
NEIL1-205ENST00000564738 PNNQ9H307 717 aaKnown RBP24.99■■□□□ 1.59
NEIL1-205ENST00000564738 MIS18AQ9NYP9 233 aa24.99■■□□□ 1.59
NEIL1-205ENST00000564738 MAPK8IP3Q9UPT6 1336 aa24.98■■□□□ 1.59
NEIL1-205ENST00000564738 ADRA2BP18089 450 aa24.98■■□□□ 1.59
NEIL1-205ENST00000564738 CCDC146Q8IYE0 955 aa24.98■■□□□ 1.59
NEIL1-205ENST00000564738 THUMPD2Q9BTF0 503 aaKnown RBP24.98■■□□□ 1.59
NEIL1-205ENST00000564738 ZBTB1Q9Y2K1 713 aa24.98■■□□□ 1.59
NEIL1-205ENST00000564738 GYS1P13807 737 aa24.97■■□□□ 1.59
NEIL1-205ENST00000564738 CANXP27824 592 aaKnown RBP24.97■■□□□ 1.59
NEIL1-205ENST00000564738 HEG1Q9ULI3 1381 aa24.96■■□□□ 1.59
NEIL1-205ENST00000564738 MMP10P09238 476 aa24.96■■□□□ 1.59
NEIL1-205ENST00000564738 FMNL2Q96PY5 1086 aa24.96■■□□□ 1.59
NEIL1-205ENST00000564738 TAF7Q15545 349 aaPredicted RBP24.95■■□□□ 1.58
NEIL1-205ENST00000564738 PRAMEF22A3QJZ6 481 aa24.94■■□□□ 1.58
NEIL1-205ENST00000564738 WDR43Q15061 677 aaKnown RBP eCLIP24.94■■□□□ 1.58
NEIL1-205ENST00000564738 PELP1Q8IZL8 1130 aaKnown RBP24.94■■□□□ 1.58
NEIL1-205ENST00000564738 NLGN1Q8N2Q7 840 aa24.94■■□□□ 1.58
NEIL1-205ENST00000564738 ADAMTS8Q9UP79 889 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms