RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 ATP6V1AP38606 617 aa24.57■■□□□ 1.52
SYNGR3-204ENST00000564642 NFATC2IPQ8NCF5 419 aa24.57■■□□□ 1.52
SYNGR3-204ENST00000564642 SLC16A10Q8TF71 515 aa24.57■■□□□ 1.52
SYNGR3-204ENST00000564642 MSH5O43196 834 aa24.56■■□□□ 1.52
SYNGR3-204ENST00000564642 VIRMAQ69YN4 1812 aaKnown RBP24.56■■□□□ 1.52
SYNGR3-204ENST00000564642 U2AF1L5P0DN76 240 aaPredicted RBP24.55■■□□□ 1.52
SYNGR3-204ENST00000564642 U2AF1Q01081 240 aaKnown RBP eCLIP24.55■■□□□ 1.52
SYNGR3-204ENST00000564642 AK7Q96M32 723 aa24.55■■□□□ 1.52
SYNGR3-204ENST00000564642 RBM42Q9BTD8 480 aaKnown RBP24.55■■□□□ 1.52
SYNGR3-204ENST00000564642 LGR6Q9HBX8 967 aa24.55■■□□□ 1.52
SYNGR3-204ENST00000564642 C4BP0C0L5 1744 aa24.55■■□□□ 1.52
SYNGR3-204ENST00000564642 RNMTO43148 476 aaKnown RBP24.54■■□□□ 1.52
SYNGR3-204ENST00000564642 PTGER2P43116 358 aa24.54■■□□□ 1.52
SYNGR3-204ENST00000564642 GAS2L2Q8NHY3 880 aa24.53■■□□□ 1.52
SYNGR3-204ENST00000564642 PRKAR2BP31323 418 aa24.52■■□□□ 1.52
SYNGR3-204ENST00000564642 COL23A1Q86Y22 540 aaPredicted RBP24.52■■□□□ 1.52
SYNGR3-204ENST00000564642 FLAD1Q8NFF5 587 aa24.52■■□□□ 1.52
SYNGR3-204ENST00000564642 SLC52A2Q9HAB3 445 aa24.52■■□□□ 1.52
SYNGR3-204ENST00000564642 RALBP1Q15311 655 aa24.51■■□□□ 1.51
SYNGR3-204ENST00000564642 LINC00116Q8NCU8 138 aa24.51■■□□□ 1.51
SYNGR3-204ENST00000564642 RSPH6AQ9H0K4 717 aa24.51■■□□□ 1.51
SYNGR3-204ENST00000564642 ITPK1Q13572 414 aa24.5■■□□□ 1.51
SYNGR3-204ENST00000564642 GNAT3A8MTJ3 354 aa24.49■■□□□ 1.51
SYNGR3-204ENST00000564642 FCHSD2O94868 740 aa24.49■■□□□ 1.51
SYNGR3-204ENST00000564642 SGIP1Q9BQI5 828 aa24.49■■□□□ 1.51
SYNGR3-204ENST00000564642 PTCD1O75127 700 aaKnown RBP24.48■■□□□ 1.51
SYNGR3-204ENST00000564642 POLD1P28340 1107 aa24.48■■□□□ 1.51
SYNGR3-204ENST00000564642 ZNF831Q5JPB2 1677 aa24.48■■□□□ 1.51
SYNGR3-204ENST00000564642 MAP3K5Q99683 1374 aa24.47■■□□□ 1.51
SYNGR3-204ENST00000564642 PHF14O94880 888 aa24.47■■□□□ 1.51
SYNGR3-204ENST00000564642 PHACTR3Q96KR7 559 aa24.47■■□□□ 1.51
SYNGR3-204ENST00000564642 ARXQ96QS3 562 aa24.47■■□□□ 1.51
SYNGR3-204ENST00000564642 UBR3Q6ZT12 1888 aa24.47■■□□□ 1.51
SYNGR3-204ENST00000564642 SLC4A9Q96Q91 983 aa24.46■■□□□ 1.51
SYNGR3-204ENST00000564642 GNPATO15228 680 aa24.45■■□□□ 1.5
SYNGR3-204ENST00000564642 ADAMTS7Q9UKP4 1686 aa24.45■■□□□ 1.5
SYNGR3-204ENST00000564642 MRC1P22897 1456 aa24.45■■□□□ 1.5
SYNGR3-204ENST00000564642 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP24.44■■□□□ 1.5
SYNGR3-204ENST00000564642 NEFMP07197 916 aa24.44■■□□□ 1.5
SYNGR3-204ENST00000564642 SSFA2P28290 1259 aa24.44■■□□□ 1.5
SYNGR3-204ENST00000564642 TEFQ10587 303 aa24.43■■□□□ 1.5
SYNGR3-204ENST00000564642 COL24A1Q17RW2 1714 aa24.43■■□□□ 1.5
SYNGR3-204ENST00000564642 SLC39A6Q13433 755 aa24.42■■□□□ 1.5
SYNGR3-204ENST00000564642 SMIM5Q71RC9 77 aa24.42■■□□□ 1.5
SYNGR3-204ENST00000564642 AMIGO3Q86WK7 504 aa24.42■■□□□ 1.5
SYNGR3-204ENST00000564642 IL17REQ8NFR9 667 aa24.42■■□□□ 1.5
SYNGR3-204ENST00000564642 FHDC1Q9C0D6 1143 aaPredicted RBP24.42■■□□□ 1.5
SYNGR3-204ENST00000564642 COL5A3P25940 1745 aaPredicted RBP24.41■■□□□ 1.5
SYNGR3-204ENST00000564642 DCAF8L1A6NGE4 600 aa24.41■■□□□ 1.5
SYNGR3-204ENST00000564642 RC3H1Q5TC82 1133 aaKnown RBP24.41■■□□□ 1.5
SYNGR3-204ENST00000564642 RTCBQ9Y3I0 505 aaKnown RBP24.41■■□□□ 1.5
SYNGR3-204ENST00000564642 MSL1Q68DK7 614 aa24.4■■□□□ 1.5
SYNGR3-204ENST00000564642 MYBBP1AQ9BQG0 1328 aaKnown RBP24.39■■□□□ 1.5
SYNGR3-204ENST00000564642 CNTNAP4Q9C0A0 1308 aa24.39■■□□□ 1.5
SYNGR3-204ENST00000564642 ZNF784Q8NCA9 323 aaPredicted RBP24.39■■□□□ 1.49
SYNGR3-204ENST00000564642 RTF1Q92541 710 aaKnown RBP24.39■■□□□ 1.49
SYNGR3-204ENST00000564642 SYT17Q9BSW7 474 aa24.39■■□□□ 1.49
SYNGR3-204ENST00000564642 PNNQ9H307 717 aaKnown RBP24.39■■□□□ 1.49
SYNGR3-204ENST00000564642 TRAPPC3LQ5T215 181 aa24.38■■□□□ 1.49
SYNGR3-204ENST00000564642 TTC5Q8N0Z6 440 aa24.38■■□□□ 1.49
SYNGR3-204ENST00000564642 KLHL34Q8N239 644 aa24.37■■□□□ 1.49
SYNGR3-204ENST00000564642 TJP1Q07157 1748 aa24.36■■□□□ 1.49
SYNGR3-204ENST00000564642 RPS6KA4O75676 772 aa24.36■■□□□ 1.49
SYNGR3-204ENST00000564642 MYH14Q7Z406 1995 aaKnown RBP24.35■■□□□ 1.49
SYNGR3-204ENST00000564642 CEMIPQ8WUJ3 1361 aa24.35■■□□□ 1.49
SYNGR3-204ENST00000564642 CRKLP46109 303 aaKnown RBP24.35■■□□□ 1.49
SYNGR3-204ENST00000564642 SIPA1L3O60292 1781 aaPredicted RBP24.34■■□□□ 1.49
SYNGR3-204ENST00000564642 ADRA2BP18089 450 aa24.34■■□□□ 1.49
SYNGR3-204ENST00000564642 C1QTNF8P60827 252 aa24.34■■□□□ 1.49
SYNGR3-204ENST00000564642 DNAJC10Q8IXB1 793 aa24.34■■□□□ 1.49
SYNGR3-204ENST00000564642 CICQ96RK0 1608 aaPredicted RBP24.34■■□□□ 1.49
SYNGR3-204ENST00000564642 HTATSF1O43719 755 aaKnown RBP24.33■■□□□ 1.49
SYNGR3-204ENST00000564642 MCM10Q7L590 875 aa24.33■■□□□ 1.49
SYNGR3-204ENST00000564642 VSIG10Q8N0Z9 540 aa24.33■■□□□ 1.49
SYNGR3-204ENST00000564642 KCPQ6ZWJ8 1503 aa24.33■■□□□ 1.49
SYNGR3-204ENST00000564642 MAPK8IP3Q9UPT6 1336 aa24.33■■□□□ 1.48
SYNGR3-204ENST00000564642 RFC4P35249 363 aa24.32■■□□□ 1.48
SYNGR3-204ENST00000564642 ZNF790Q6PG37 636 aa24.32■■□□□ 1.48
SYNGR3-204ENST00000564642 ARHGEF1Q92888 912 aaKnown RBP24.32■■□□□ 1.48
SYNGR3-204ENST00000564642 PLEKHF1Q96S99 279 aa24.32■■□□□ 1.48
SYNGR3-204ENST00000564642 UBR2Q8IWV8 1755 aa24.31■■□□□ 1.48
SYNGR3-204ENST00000564642 BTBD11A6QL63 1104 aa24.31■■□□□ 1.48
SYNGR3-204ENST00000564642 PRKRIP1Q9H875 184 aaPredicted RBP24.31■■□□□ 1.48
SYNGR3-204ENST00000564642 DLG5Q8TDM6 1919 aa24.3■■□□□ 1.48
SYNGR3-204ENST00000564642 ZNF316A6NFI3 1004 aaPredicted RBP24.3■■□□□ 1.48
SYNGR3-204ENST00000564642 CCDC87Q9NVE4 849 aa24.3■■□□□ 1.48
SYNGR3-204ENST00000564642 CYP19A1P11511 503 aaPredicted RBP24.29■■□□□ 1.48
SYNGR3-204ENST00000564642 DCTN1Q14203 1278 aa24.29■■□□□ 1.48
SYNGR3-204ENST00000564642 INTS5Q6P9B9 1019 aaKnown RBP24.29■■□□□ 1.48
SYNGR3-204ENST00000564642 ZNF496Q96IT1 587 aaPredicted RBP24.28■■□□□ 1.48
SYNGR3-204ENST00000564642 FMNL2Q96PY5 1086 aa24.28■■□□□ 1.48
SYNGR3-204ENST00000564642 NFE2L2Q16236 605 aa24.27■■□□□ 1.48
SYNGR3-204ENST00000564642 NLGN1Q8N2Q7 840 aa24.27■■□□□ 1.48
SYNGR3-204ENST00000564642 TEX13AQ9BXU3 409 aaPredicted RBP24.27■■□□□ 1.48
SYNGR3-204ENST00000564642 STARD3NLO95772 234 aa24.26■■□□□ 1.47
SYNGR3-204ENST00000564642 WDR43Q15061 677 aaKnown RBP eCLIP24.26■■□□□ 1.47
SYNGR3-204ENST00000564642 HEG1Q9ULI3 1381 aa24.26■■□□□ 1.47
SYNGR3-204ENST00000564642 C4AP0C0L4 1744 aa24.24■■□□□ 1.47
SYNGR3-204ENST00000564642 KCNQ3O43525 872 aa24.24■■□□□ 1.47
SYNGR3-204ENST00000564642 MMP10P09238 476 aa24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms