RNA–Protein interactions for RNA: ENST00000564276.1

PKM-211, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 753 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-211ENST00000564276 VIRMAQ69YN4 1812 aaKnown RBP12.93□□□□□ -0.34
PKM-211ENST00000564276 ANP32CO43423 234 aa12.93□□□□□ -0.34
PKM-211ENST00000564276 CABP2Q9NPB3 220 aa12.93□□□□□ -0.34
PKM-211ENST00000564276 KDM2AQ9Y2K7 1162 aa12.93□□□□□ -0.34
PKM-211ENST00000564276 SRPK2P78362 688 aaKnown RBP12.92□□□□□ -0.34
PKM-211ENST00000564276 CCDC88AQ3V6T2 1871 aa12.92□□□□□ -0.34
PKM-211ENST00000564276 AIDAQ96BJ3 306 aa12.92□□□□□ -0.34
PKM-211ENST00000564276 CABP1Q9NZU7 370 aa12.92□□□□□ -0.34
PKM-211ENST00000564276 DPEP1P16444 411 aa12.91□□□□□ -0.34
PKM-211ENST00000564276 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.9□□□□□ -0.34
PKM-211ENST00000564276 MMP10P09238 476 aa12.89□□□□□ -0.35
PKM-211ENST00000564276 TGFB2P61812 414 aa12.89□□□□□ -0.35
PKM-211ENST00000564276 ANKRD24Q8TF21 1146 aa12.89□□□□□ -0.35
PKM-211ENST00000564276 AK7Q96M32 723 aa12.89□□□□□ -0.35
PKM-211ENST00000564276 RGPD2P0DJD1 1756 aa12.89□□□□□ -0.35
PKM-211ENST00000564276 KIF7Q2M1P5 1343 aa12.88□□□□□ -0.35
PKM-211ENST00000564276 HSPA8P11142 646 aaKnown RBP12.88□□□□□ -0.35
PKM-211ENST00000564276 CREBZFQ9NS37 354 aa12.88□□□□□ -0.35
PKM-211ENST00000564276 TTC21BQ7Z4L5 1316 aa12.88□□□□□ -0.35
PKM-211ENST00000564276 CNTNAP1P78357 1384 aa12.87□□□□□ -0.35
PKM-211ENST00000564276 VEGFAP15692 232 aaPredicted RBP12.87□□□□□ -0.35
PKM-211ENST00000564276 DCAF11Q8TEB1 546 aa12.87□□□□□ -0.35
PKM-211ENST00000564276 ROCK2O75116 1388 aaKnown RBP12.86□□□□□ -0.35
PKM-211ENST00000564276 KCNA3P22001 575 aa12.86□□□□□ -0.35
PKM-211ENST00000564276 CFAP44Q96MT7 982 aa12.86□□□□□ -0.35
PKM-211ENST00000564276 WBP1LQ9NX94 342 aa12.86□□□□□ -0.35
PKM-211ENST00000564276 PALLDQ8WX93 1383 aa12.85□□□□□ -0.35
PKM-211ENST00000564276 VEGFBP49765 207 aa12.85□□□□□ -0.35
PKM-211ENST00000564276 CARD11Q9BXL7 1154 aa12.85□□□□□ -0.35
PKM-211ENST00000564276 ITGB4P16144 1822 aa12.85□□□□□ -0.35
PKM-211ENST00000564276 TIAM2Q8IVF5 1701 aa12.85□□□□□ -0.35
PKM-211ENST00000564276 DCAF5Q96JK2 942 aa12.84□□□□□ -0.35
PKM-211ENST00000564276 POTECB2RU33 542 aa12.83□□□□□ -0.36
PKM-211ENST00000564276 RASSF7Q02833 373 aa12.83□□□□□ -0.36
PKM-211ENST00000564276 STAC3Q96MF2 364 aa12.83□□□□□ -0.36
PKM-211ENST00000564276 GTF3C3Q9Y5Q9 886 aa12.83□□□□□ -0.36
PKM-211ENST00000564276 MAP2P11137 1827 aaKnown RBP12.83□□□□□ -0.36
PKM-211ENST00000564276 FAM208AQ9UK61 1670 aaKnown RBP12.83□□□□□ -0.36
PKM-211ENST00000564276 C4AP0C0L4 1744 aa12.82□□□□□ -0.36
PKM-211ENST00000564276 GLTPD2A6NH11 291 aa12.82□□□□□ -0.36
PKM-211ENST00000564276 SSFA2P28290 1259 aa12.82□□□□□ -0.36
PKM-211ENST00000564276 LTV1Q96GA3 475 aaPredicted RBP12.82□□□□□ -0.36
PKM-211ENST00000564276 ZBTB12Q9Y330 459 aaPredicted RBP12.82□□□□□ -0.36
PKM-211ENST00000564276 NSD3Q9BZ95 1437 aa12.81□□□□□ -0.36
PKM-211ENST00000564276 ZCRB1Q8TBF4 217 aaKnown RBP12.81□□□□□ -0.36
PKM-211ENST00000564276 MEGF6O75095 1541 aa12.81□□□□□ -0.36
PKM-211ENST00000564276 CASP8AP2Q9UKL3 1982 aa12.8□□□□□ -0.36
PKM-211ENST00000564276 POTEIP0CG38 1075 aa12.8□□□□□ -0.36
PKM-211ENST00000564276 POTEJP0CG39 1038 aa12.8□□□□□ -0.36
PKM-211ENST00000564276 DALRD3Q5D0E6 543 aaKnown RBP12.8□□□□□ -0.36
PKM-211ENST00000564276 LINC00116Q8NCU8 138 aa12.8□□□□□ -0.36
PKM-211ENST00000564276 PIM2Q9P1W9 311 aa12.8□□□□□ -0.36
PKM-211ENST00000564276 MPRIPQ6WCQ1 1025 aa12.79□□□□□ -0.36
PKM-211ENST00000564276 CCDC87Q9NVE4 849 aa12.79□□□□□ -0.36
PKM-211ENST00000564276 TTC21AQ8NDW8 1320 aa12.79□□□□□ -0.36
PKM-211ENST00000564276 KDM6AO15550 1401 aaPredicted RBP12.79□□□□□ -0.36
PKM-211ENST00000564276 GNPATO15228 680 aa12.78□□□□□ -0.36
PKM-211ENST00000564276 CHADLQ6NUI6 762 aa12.78□□□□□ -0.36
PKM-211ENST00000564276 PRKRIP1Q9H875 184 aaPredicted RBP12.77□□□□□ -0.37
PKM-211ENST00000564276 ZC3H4Q9UPT8 1303 aaKnown RBP12.77□□□□□ -0.37
PKM-211ENST00000564276 MON2Q7Z3U7 1717 aa12.76□□□□□ -0.37
PKM-211ENST00000564276 ST20-MTHFSA0A0A6YYL1 179 aa12.76□□□□□ -0.37
PKM-211ENST00000564276 CHRNA5P30532 468 aa12.76□□□□□ -0.37
PKM-211ENST00000564276 HMGB2P26583 209 aaKnown RBP12.75□□□□□ -0.37
PKM-211ENST00000564276 TMF1P82094 1093 aa12.75□□□□□ -0.37
PKM-211ENST00000564276 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.75□□□□□ -0.37
PKM-211ENST00000564276 CENPJQ9HC77 1338 aaPredicted RBP12.75□□□□□ -0.37
PKM-211ENST00000564276 DICER1Q9UPY3 1922 aaKnown RBP12.74□□□□□ -0.37
PKM-211ENST00000564276 PASKQ96RG2 1323 aa12.74□□□□□ -0.37
PKM-211ENST00000564276 LMNB1P20700 586 aa12.74□□□□□ -0.37
PKM-211ENST00000564276 ITPK1Q13572 414 aa12.74□□□□□ -0.37
PKM-211ENST00000564276 NBPF1Q3BBV0 1214 aa12.74□□□□□ -0.37
PKM-211ENST00000564276 NME9Q86XW9 330 aa12.74□□□□□ -0.37
PKM-211ENST00000564276 ZNF692Q9BU19 519 aaPredicted RBP12.74□□□□□ -0.37
PKM-211ENST00000564276 USP31Q70CQ4 1352 aa12.73□□□□□ -0.37
PKM-211ENST00000564276 KTN1Q86UP2 1357 aaKnown RBP12.73□□□□□ -0.37
PKM-211ENST00000564276 NLGN1Q8N2Q7 840 aa12.73□□□□□ -0.37
PKM-211ENST00000564276 MCOLN1Q9GZU1 580 aa12.73□□□□□ -0.37
PKM-211ENST00000564276 TSKSQ9UJT2 592 aa12.73□□□□□ -0.37
PKM-211ENST00000564276 PARP3Q9Y6F1 533 aa12.73□□□□□ -0.37
PKM-211ENST00000564276 LOC102724428A0A0B4J2F2 783 aa12.72□□□□□ -0.37
PKM-211ENST00000564276 TMEM88BA6NKF7 163 aa12.72□□□□□ -0.37
PKM-211ENST00000564276 SIK1P57059 783 aa12.72□□□□□ -0.37
PKM-211ENST00000564276 PRPF38BQ5VTL8 546 aaKnown RBP12.72□□□□□ -0.37
PKM-211ENST00000564276 IP6K1Q92551 441 aa12.72□□□□□ -0.37
PKM-211ENST00000564276 SMARCC1Q92922 1105 aaPredicted RBP12.72□□□□□ -0.37
PKM-211ENST00000564276 WDR33Q9C0J8 1336 aaKnown RBP12.71□□□□□ -0.37
PKM-211ENST00000564276 GYS1P13807 737 aa12.71□□□□□ -0.37
PKM-211ENST00000564276 MAP2K1Q02750 393 aaPredicted RBP12.71□□□□□ -0.37
PKM-211ENST00000564276 USHBP1Q8N6Y0 703 aa12.7□□□□□ -0.38
PKM-211ENST00000564276 PIGBQ92521 554 aa12.7□□□□□ -0.38
PKM-211ENST00000564276 TESK2Q96S53 571 aa12.7□□□□□ -0.38
PKM-211ENST00000564276 DEFB115Q30KQ5 88 aa12.69□□□□□ -0.38
PKM-211ENST00000564276 TRAPPC3LQ5T215 181 aa12.69□□□□□ -0.38
PKM-211ENST00000564276 MYH14Q7Z406 1995 aaKnown RBP12.69□□□□□ -0.38
PKM-211ENST00000564276 LTBP1Q14766 1721 aa12.68□□□□□ -0.38
PKM-211ENST00000564276 RASSF10A6NK89 507 aa12.68□□□□□ -0.38
PKM-211ENST00000564276 ATP6V1AP38606 617 aa12.68□□□□□ -0.38
PKM-211ENST00000564276 SOX10P56693 466 aa12.68□□□□□ -0.38
PKM-211ENST00000564276 MKRN4PQ13434 485 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms