RNA–Protein interactions for RNA: ENST00000563246.1

SCAPER-206, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 3

Gene SCAPER, Length 552 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-206ENST00000563246 CNTNAP3Q9BZ76 1288 aa9.78□□□□□ -0.84
SCAPER-206ENST00000563246 POGZQ7Z3K3 1410 aa9.78□□□□□ -0.84
SCAPER-206ENST00000563246 TTC37Q6PGP7 1564 aa9.78□□□□□ -0.84
SCAPER-206ENST00000563246 SIGLEC1Q9BZZ2 1709 aa9.78□□□□□ -0.84
SCAPER-206ENST00000563246 STRCQ7RTU9 1775 aa9.78□□□□□ -0.84
SCAPER-206ENST00000563246 ADAM32Q8TC27 787 aa9.77□□□□□ -0.85
SCAPER-206ENST00000563246 TRIM52Q96A61 297 aa9.77□□□□□ -0.85
SCAPER-206ENST00000563246 OCSTAMPQ9BR26 566 aa9.77□□□□□ -0.85
SCAPER-206ENST00000563246 COL25A1Q9BXS0 654 aaPredicted RBP9.77□□□□□ -0.85
SCAPER-206ENST00000563246 FANCAO15360 1455 aa9.77□□□□□ -0.85
SCAPER-206ENST00000563246 AKNAQ7Z591 1439 aa9.76□□□□□ -0.85
SCAPER-206ENST00000563246 ITGA6P23229 1130 aa9.76□□□□□ -0.85
SCAPER-206ENST00000563246 GSK3AP49840 483 aa9.76□□□□□ -0.85
SCAPER-206ENST00000563246 IQSEC2Q5JU85 1478 aa9.76□□□□□ -0.85
SCAPER-206ENST00000563246 ARHGEF12Q9NZN5 1544 aa9.76□□□□□ -0.85
SCAPER-206ENST00000563246 PTPRTO14522 1441 aa9.75□□□□□ -0.85
SCAPER-206ENST00000563246 CTSOP43234 321 aaPredicted RBP9.74□□□□□ -0.85
SCAPER-206ENST00000563246 FBXO31Q5XUX0 539 aaPredicted RBP9.74□□□□□ -0.85
SCAPER-206ENST00000563246 KDM4CQ9H3R0 1056 aa9.74□□□□□ -0.85
SCAPER-206ENST00000563246 SPATA31D1Q6ZQQ2 1576 aa9.74□□□□□ -0.85
SCAPER-206ENST00000563246 LTBP4Q8N2S1 1624 aa9.74□□□□□ -0.85
SCAPER-206ENST00000563246 AP1G2O75843 785 aa9.73□□□□□ -0.85
SCAPER-206ENST00000563246 SLURP2P0DP57 97 aa9.73□□□□□ -0.85
SCAPER-206ENST00000563246 RELBQ01201 579 aa9.73□□□□□ -0.85
SCAPER-206ENST00000563246 SV2AQ7L0J3 742 aa9.73□□□□□ -0.85
SCAPER-206ENST00000563246 FAM9AQ8IZU1 332 aaPredicted RBP9.73□□□□□ -0.85
SCAPER-206ENST00000563246 PROCA1Q8NCQ7 364 aaPredicted RBP9.73□□□□□ -0.85
SCAPER-206ENST00000563246 RNF217Q8TC41 542 aa9.73□□□□□ -0.85
SCAPER-206ENST00000563246 AGBL1Q96MI9 1066 aa9.73□□□□□ -0.85
SCAPER-206ENST00000563246 INSM2Q96T92 566 aaPredicted RBP9.73□□□□□ -0.85
SCAPER-206ENST00000563246 ADAMTS8Q9UP79 889 aa9.73□□□□□ -0.85
SCAPER-206ENST00000563246 PREX1Q8TCU6 1659 aa9.73□□□□□ -0.85
SCAPER-206ENST00000563246 NUP153P49790 1475 aaKnown RBP9.72□□□□□ -0.85
SCAPER-206ENST00000563246 EFCAB5A4FU69 1503 aa9.72□□□□□ -0.85
SCAPER-206ENST00000563246 ADH1AP07327 375 aa9.72□□□□□ -0.85
SCAPER-206ENST00000563246 SEPT12Q8IYM1 358 aa9.72□□□□□ -0.85
SCAPER-206ENST00000563246 TMEM151AQ8N4L1 468 aa9.72□□□□□ -0.85
SCAPER-206ENST00000563246 POLMQ9NP87 494 aaPredicted RBP9.72□□□□□ -0.85
SCAPER-206ENST00000563246 ZFYVE16Q7Z3T8 1539 aa9.72□□□□□ -0.85
SCAPER-206ENST00000563246 SAMD9Q5K651 1589 aa9.71□□□□□ -0.85
SCAPER-206ENST00000563246 ESPNB1AK53 854 aa9.71□□□□□ -0.86
SCAPER-206ENST00000563246 ZNF385CQ66K41 422 aaPredicted RBP9.71□□□□□ -0.86
SCAPER-206ENST00000563246 ZNF784Q8NCA9 323 aaPredicted RBP9.71□□□□□ -0.86
SCAPER-206ENST00000563246 FAM117AQ9C073 453 aa9.71□□□□□ -0.86
SCAPER-206ENST00000563246 ATP10AO60312 1499 aa9.71□□□□□ -0.86
SCAPER-206ENST00000563246 RAPGEF6Q8TEU7 1601 aa9.71□□□□□ -0.86
SCAPER-206ENST00000563246 USP17L8P0C7I0 530 aa9.7□□□□□ -0.86
SCAPER-206ENST00000563246 RNFT1Q5M7Z0 435 aa9.7□□□□□ -0.86
SCAPER-206ENST00000563246 DZIP3Q86Y13 1208 aaKnown RBP9.7□□□□□ -0.86
SCAPER-206ENST00000563246 ATP1B4Q9UN42 357 aaPredicted RBP9.7□□□□□ -0.86
SCAPER-206ENST00000563246 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.7□□□□□ -0.86
SCAPER-206ENST00000563246 CFAP74Q9C0B2 1584 aa9.7□□□□□ -0.86
SCAPER-206ENST00000563246 FER1L4A9Z1Z3 1794 aa9.7□□□□□ -0.86
SCAPER-206ENST00000563246 PLEKHD1A6NEE1 506 aa9.69□□□□□ -0.86
SCAPER-206ENST00000563246 LILRA1O75019 489 aa9.69□□□□□ -0.86
SCAPER-206ENST00000563246 RASSF7Q02833 373 aa9.69□□□□□ -0.86
SCAPER-206ENST00000563246 HECW1Q76N89 1606 aa9.69□□□□□ -0.86
SCAPER-206ENST00000563246 VWA5B2Q8N398 1253 aa9.69□□□□□ -0.86
SCAPER-206ENST00000563246 SVOPQ8N4V2 548 aa9.69□□□□□ -0.86
SCAPER-206ENST00000563246 GPBP1L1Q9HC44 474 aaPredicted RBP9.69□□□□□ -0.86
SCAPER-206ENST00000563246 TMPRSS4Q9NRS4 437 aa9.69□□□□□ -0.86
SCAPER-206ENST00000563246 SENP3-EIF4A1A0A087X0R7 540 aa9.68□□□□□ -0.86
SCAPER-206ENST00000563246 CDC14CA4D256 554 aa9.68□□□□□ -0.86
SCAPER-206ENST00000563246 ARID3CA6NKF2 412 aa9.68□□□□□ -0.86
SCAPER-206ENST00000563246 ERVH48-1M5A8F1 160 aa9.68□□□□□ -0.86
SCAPER-206ENST00000563246 GDF11O95390 407 aa9.68□□□□□ -0.86
SCAPER-206ENST00000563246 PTGIRP43119 386 aa9.68□□□□□ -0.86
SCAPER-206ENST00000563246 EPS8L1Q8TE68 723 aa9.68□□□□□ -0.86
SCAPER-206ENST00000563246 ZNF395Q9H8N7 513 aaPredicted RBP9.68□□□□□ -0.86
SCAPER-206ENST00000563246 PLCH2O75038 1416 aa9.67□□□□□ -0.86
SCAPER-206ENST00000563246 CEBPAP49715 358 aaPredicted RBP9.67□□□□□ -0.86
SCAPER-206ENST00000563246 FOXD4L5Q5VV16 416 aaPredicted RBP9.67□□□□□ -0.86
SCAPER-206ENST00000563246 CCDC125Q86Z20 511 aa9.67□□□□□ -0.86
SCAPER-206ENST00000563246 KCTD17Q8N5Z5 321 aa9.67□□□□□ -0.86
SCAPER-206ENST00000563246 HMX1Q9NP08 348 aaPredicted RBP9.67□□□□□ -0.86
SCAPER-206ENST00000563246 C9orf84Q5VXU9 1444 aa9.66□□□□□ -0.86
SCAPER-206ENST00000563246 UHRF1BP1Q6BDS2 1440 aa9.66□□□□□ -0.86
SCAPER-206ENST00000563246 ARHGEF15O94989 841 aa9.66□□□□□ -0.86
SCAPER-206ENST00000563246 SCAPERQ9BY12 1400 aa9.65□□□□□ -0.86
SCAPER-206ENST00000563246 ADD1P35611 737 aaKnown RBP9.65□□□□□ -0.86
SCAPER-206ENST00000563246 RFC5P40937 340 aa9.65□□□□□ -0.86
SCAPER-206ENST00000563246 LYSMD3Q7Z3D4 306 aa9.65□□□□□ -0.86
SCAPER-206ENST00000563246 KDF1Q8NAX2 398 aaPredicted RBP9.65□□□□□ -0.86
SCAPER-206ENST00000563246 GMCL1Q96IK5 515 aa9.65□□□□□ -0.86
SCAPER-206ENST00000563246 GOPCQ9HD26 462 aa9.65□□□□□ -0.86
SCAPER-206ENST00000563246 REREQ9P2R6 1566 aa9.64□□□□□ -0.87
SCAPER-206ENST00000563246 MLECQ14165 292 aa9.64□□□□□ -0.87
SCAPER-206ENST00000563246 RNF144AP50876 292 aaPredicted RBP9.63□□□□□ -0.87
SCAPER-206ENST00000563246 RAB15P59190 212 aa9.63□□□□□ -0.87
SCAPER-206ENST00000563246 SRSF11Q05519 484 aaKnown RBP9.63□□□□□ -0.87
SCAPER-206ENST00000563246 NCOA1Q15788 1441 aa9.63□□□□□ -0.87
SCAPER-206ENST00000563246 TRAPPC8Q9Y2L5 1435 aa9.63□□□□□ -0.87
SCAPER-206ENST00000563246 GPC1P35052 558 aa9.62□□□□□ -0.87
SCAPER-206ENST00000563246 SUZ12Q15022 739 aaKnown RBP9.62□□□□□ -0.87
SCAPER-206ENST00000563246 TMEM259Q4ZIN3 620 aa9.62□□□□□ -0.87
SCAPER-206ENST00000563246 KANK3Q6NY19 840 aa9.62□□□□□ -0.87
SCAPER-206ENST00000563246 WHAMMQ8TF30 809 aa9.62□□□□□ -0.87
SCAPER-206ENST00000563246 AGLP35573 1532 aa9.61□□□□□ -0.87
SCAPER-206ENST00000563246 ADAMTS2O95450 1211 aa9.61□□□□□ -0.87
SCAPER-206ENST00000563246 SCARF2Q96GP6 870 aaPredicted RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms