RNA–Protein interactions for RNA: ENST00000563207.1

USB1-208, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 5

Gene USB1, Length 464 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-208ENST00000563207 GPR162Q16538 588 aa21.23■□□□□ 0.99
USB1-208ENST00000563207 SULT6B1Q6IMI4 303 aa21.23■□□□□ 0.99
USB1-208ENST00000563207 ZNF530Q6P9A1 599 aaPredicted RBP21.23■□□□□ 0.99
USB1-208ENST00000563207 PELP1Q8IZL8 1130 aaKnown RBP21.23■□□□□ 0.99
USB1-208ENST00000563207 CHD4Q14839 1912 aa21.22■□□□□ 0.99
USB1-208ENST00000563207 ATP6V1AP38606 617 aa21.22■□□□□ 0.99
USB1-208ENST00000563207 PLEKHO1Q53GL0 409 aaPredicted RBP21.22■□□□□ 0.99
USB1-208ENST00000563207 CC2D1BQ5T0F9 858 aaKnown RBP21.22■□□□□ 0.99
USB1-208ENST00000563207 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.21■□□□□ 0.99
USB1-208ENST00000563207 MTHFSP49914 203 aa21.2■□□□□ 0.98
USB1-208ENST00000563207 YBX3P16989 372 aaKnown RBP eCLIP21.19■□□□□ 0.98
USB1-208ENST00000563207 DCAF5Q96JK2 942 aa21.19■□□□□ 0.98
USB1-208ENST00000563207 KDRP35968 1356 aa21.19■□□□□ 0.98
USB1-208ENST00000563207 ERVV-2B6SEH9 535 aa21.18■□□□□ 0.98
USB1-208ENST00000563207 GNPATO15228 680 aa21.18■□□□□ 0.98
USB1-208ENST00000563207 DDX10Q13206 875 aaKnown RBP21.18■□□□□ 0.98
USB1-208ENST00000563207 ZNF784Q8NCA9 323 aaPredicted RBP21.18■□□□□ 0.98
USB1-208ENST00000563207 RBM42Q9BTD8 480 aaKnown RBP21.18■□□□□ 0.98
USB1-208ENST00000563207 FLAD1Q8NFF5 587 aa21.17■□□□□ 0.98
USB1-208ENST00000563207 HMOX1P09601 288 aa21.16■□□□□ 0.98
USB1-208ENST00000563207 CABP4P57796 275 aa21.16■□□□□ 0.98
USB1-208ENST00000563207 AMOTQ4VCS5 1084 aa21.16■□□□□ 0.98
USB1-208ENST00000563207 COL5A3P25940 1745 aaPredicted RBP21.15■□□□□ 0.98
USB1-208ENST00000563207 PLEKHG2Q9H7P9 1386 aa21.15■□□□□ 0.98
USB1-208ENST00000563207 NFATC2IPQ8NCF5 419 aa21.15■□□□□ 0.98
USB1-208ENST00000563207 SSFA2P28290 1259 aa21.14■□□□□ 0.97
USB1-208ENST00000563207 LGR6Q9HBX8 967 aa21.14■□□□□ 0.97
USB1-208ENST00000563207 WWC3Q9ULE0 1092 aa21.14■□□□□ 0.97
USB1-208ENST00000563207 SCN11AQ9UI33 1791 aa21.14■□□□□ 0.97
USB1-208ENST00000563207 MYH14Q7Z406 1995 aaKnown RBP21.14■□□□□ 0.97
USB1-208ENST00000563207 PTCD1O75127 700 aaKnown RBP21.13■□□□□ 0.97
USB1-208ENST00000563207 HSP90AB1P08238 724 aaKnown RBP21.13■□□□□ 0.97
USB1-208ENST00000563207 C1orf141Q5JVX7 400 aa21.13■□□□□ 0.97
USB1-208ENST00000563207 VIRMAQ69YN4 1812 aaKnown RBP21.13■□□□□ 0.97
USB1-208ENST00000563207 ZNF831Q5JPB2 1677 aa21.12■□□□□ 0.97
USB1-208ENST00000563207 CD2APQ9Y5K6 639 aa21.1■□□□□ 0.97
USB1-208ENST00000563207 TJP1Q07157 1748 aa21.09■□□□□ 0.97
USB1-208ENST00000563207 ARHGEF1Q92888 912 aaKnown RBP21.09■□□□□ 0.97
USB1-208ENST00000563207 COL3A1P02461 1466 aaPredicted RBP21.08■□□□□ 0.97
USB1-208ENST00000563207 DIAPH1O60610 1272 aaKnown RBP21.08■□□□□ 0.97
USB1-208ENST00000563207 HMGB2P26583 209 aaKnown RBP21.08■□□□□ 0.97
USB1-208ENST00000563207 MTHFSDQ2M296 383 aaKnown RBP21.08■□□□□ 0.97
USB1-208ENST00000563207 C4AP0C0L4 1744 aa21.07■□□□□ 0.96
USB1-208ENST00000563207 TRAPPC3LQ5T215 181 aa21.07■□□□□ 0.96
USB1-208ENST00000563207 RTCBQ9Y3I0 505 aaKnown RBP21.07■□□□□ 0.96
USB1-208ENST00000563207 MMP10P09238 476 aa21.06■□□□□ 0.96
USB1-208ENST00000563207 SLC39A6Q13433 755 aa21.06■□□□□ 0.96
USB1-208ENST00000563207 AKAP4Q5JQC9 854 aa21.06■□□□□ 0.96
USB1-208ENST00000563207 RPS6KA4O75676 772 aa21.05■□□□□ 0.96
USB1-208ENST00000563207 RC3H1Q5TC82 1133 aaKnown RBP21.05■□□□□ 0.96
USB1-208ENST00000563207 CNTNAP4Q9C0A0 1308 aa21.04■□□□□ 0.96
USB1-208ENST00000563207 RNMTO43148 476 aaKnown RBP21.04■□□□□ 0.96
USB1-208ENST00000563207 CRKLP46109 303 aaKnown RBP21.04■□□□□ 0.96
USB1-208ENST00000563207 SLC52A2Q9HAB3 445 aa21.04■□□□□ 0.96
USB1-208ENST00000563207 KIAA1551Q9HCM1 1747 aa21.04■□□□□ 0.96
USB1-208ENST00000563207 RALBP1Q15311 655 aa21.03■□□□□ 0.96
USB1-208ENST00000563207 SRP68Q9UHB9 627 aaKnown RBP21.03■□□□□ 0.96
USB1-208ENST00000563207 CICQ96RK0 1608 aaPredicted RBP21.03■□□□□ 0.96
USB1-208ENST00000563207 N4BP2Q86UW6 1770 aaPredicted RBP21.02■□□□□ 0.96
USB1-208ENST00000563207 GYS1P13807 737 aa21.02■□□□□ 0.96
USB1-208ENST00000563207 DNAJC10Q8IXB1 793 aa21.02■□□□□ 0.96
USB1-208ENST00000563207 ADAMTS7Q9UKP4 1686 aa21.02■□□□□ 0.95
USB1-208ENST00000563207 U2SURPO15042 1029 aaKnown RBP21.01■□□□□ 0.95
USB1-208ENST00000563207 INTS5Q6P9B9 1019 aaKnown RBP21.01■□□□□ 0.95
USB1-208ENST00000563207 MRC1P22897 1456 aa21.01■□□□□ 0.95
USB1-208ENST00000563207 GRIN3BO60391 1043 aa21■□□□□ 0.95
USB1-208ENST00000563207 RFC4P35249 363 aa21■□□□□ 0.95
USB1-208ENST00000563207 KIF13BQ9NQT8 1826 aa20.99■□□□□ 0.95
USB1-208ENST00000563207 KCPQ6ZWJ8 1503 aa20.99■□□□□ 0.95
USB1-208ENST00000563207 NLGN1Q8N2Q7 840 aa20.98■□□□□ 0.95
USB1-208ENST00000563207 PXDNLA1KZ92 1463 aa20.97■□□□□ 0.95
USB1-208ENST00000563207 A0A0G2JLW4 131 aa20.97■□□□□ 0.95
USB1-208ENST00000563207 ADRA2BP18089 450 aa20.97■□□□□ 0.95
USB1-208ENST00000563207 FKBP8Q14318 412 aa20.97■□□□□ 0.95
USB1-208ENST00000563207 PPP2R1AP30153 589 aa20.96■□□□□ 0.95
USB1-208ENST00000563207 IL17REQ8NFR9 667 aa20.96■□□□□ 0.95
USB1-208ENST00000563207 PHACTR3Q96KR7 559 aa20.96■□□□□ 0.95
USB1-208ENST00000563207 UBR2Q8IWV8 1755 aa20.95■□□□□ 0.94
USB1-208ENST00000563207 C10orf71Q711Q0 1435 aa20.95■□□□□ 0.94
USB1-208ENST00000563207 CYP19A1P11511 503 aaPredicted RBP20.94■□□□□ 0.94
USB1-208ENST00000563207 DDR1Q08345 913 aa20.94■□□□□ 0.94
USB1-208ENST00000563207 CCDC87Q9NVE4 849 aa20.94■□□□□ 0.94
USB1-208ENST00000563207 USP42Q9H9J4 1324 aaKnown RBP20.94■□□□□ 0.94
USB1-208ENST00000563207 DPEP1P16444 411 aa20.93■□□□□ 0.94
USB1-208ENST00000563207 CFAP53Q96M91 514 aa20.93■□□□□ 0.94
USB1-208ENST00000563207 PRKRIP1Q9H875 184 aaPredicted RBP20.93■□□□□ 0.94
USB1-208ENST00000563207 SIPA1L3O60292 1781 aaPredicted RBP20.92■□□□□ 0.94
USB1-208ENST00000563207 C1QTNF8P60827 252 aa20.92■□□□□ 0.94
USB1-208ENST00000563207 ZBTB1Q9Y2K1 713 aa20.92■□□□□ 0.94
USB1-208ENST00000563207 PARP3Q9Y6F1 533 aa20.92■□□□□ 0.94
USB1-208ENST00000563207 ATP10DQ9P241 1426 aa20.92■□□□□ 0.94
USB1-208ENST00000563207 SOS1Q07889 1333 aaPredicted RBP20.91■□□□□ 0.94
USB1-208ENST00000563207 RSPH6AQ9H0K4 717 aa20.91■□□□□ 0.94
USB1-208ENST00000563207 MYBBP1AQ9BQG0 1328 aaKnown RBP20.9■□□□□ 0.94
USB1-208ENST00000563207 KCNA3P22001 575 aa20.9■□□□□ 0.94
USB1-208ENST00000563207 PRKAR2BP31323 418 aa20.9■□□□□ 0.94
USB1-208ENST00000563207 USPL1Q5W0Q7 1092 aa20.9■□□□□ 0.94
USB1-208ENST00000563207 ZNF526Q8TF50 670 aaPredicted RBP20.9■□□□□ 0.94
USB1-208ENST00000563207 BRCA1P38398 1863 aaKnown RBP20.9■□□□□ 0.94
USB1-208ENST00000563207 GNAT3A8MTJ3 354 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms