RNA–Protein interactions for RNA: ENST00000563053.1

HIRIP3-202, Transcript of HIRA interacting protein 3, humanhuman

TSL 2

Gene HIRIP3, Length 1,686 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIRIP3-202ENST00000563053 SCN11AQ9UI33 1791 aa20.68■□□□□ 0.9
HIRIP3-202ENST00000563053 ZNF853P0CG23 659 aa20.67■□□□□ 0.9
HIRIP3-202ENST00000563053 RXRBP28702 533 aa20.67■□□□□ 0.9
HIRIP3-202ENST00000563053 NKX1-1Q15270 411 aaPredicted RBP20.67■□□□□ 0.9
HIRIP3-202ENST00000563053 TRMT2AQ8IZ69 625 aaKnown RBP20.67■□□□□ 0.9
HIRIP3-202ENST00000563053 SLC52A2Q9HAB3 445 aa20.67■□□□□ 0.9
HIRIP3-202ENST00000563053 KCNQ3O43525 872 aa20.67■□□□□ 0.9
HIRIP3-202ENST00000563053 ONECUT3O60422 494 aaPredicted RBP20.67■□□□□ 0.9
HIRIP3-202ENST00000563053 TOGARAM1Q9Y4F4 1720 aa20.67■□□□□ 0.9
HIRIP3-202ENST00000563053 BTBD11A6QL63 1104 aa20.66■□□□□ 0.9
HIRIP3-202ENST00000563053 ELL2O00472 640 aaPredicted RBP20.66■□□□□ 0.9
HIRIP3-202ENST00000563053 EXOSC9Q06265 439 aaKnown RBP20.66■□□□□ 0.9
HIRIP3-202ENST00000563053 SLC39A6Q13433 755 aa20.66■□□□□ 0.9
HIRIP3-202ENST00000563053 KRT24Q2M2I5 525 aa20.66■□□□□ 0.9
HIRIP3-202ENST00000563053 CHL1O00533 1208 aa20.65■□□□□ 0.9
HIRIP3-202ENST00000563053 ADAMTS7Q9UKP4 1686 aa20.65■□□□□ 0.9
HIRIP3-202ENST00000563053 PRIM1P49642 420 aaKnown RBP20.63■□□□□ 0.89
HIRIP3-202ENST00000563053 DOT1LQ8TEK3 1739 aa20.62■□□□□ 0.89
HIRIP3-202ENST00000563053 KAT6BQ8WYB5 2073 aa20.62■□□□□ 0.89
HIRIP3-202ENST00000563053 ERVV-2B6SEH9 535 aa20.61■□□□□ 0.89
HIRIP3-202ENST00000563053 TSPYL6Q8N831 410 aa20.61■□□□□ 0.89
HIRIP3-202ENST00000563053 C8orf58Q8NAV2 365 aa20.61■□□□□ 0.89
HIRIP3-202ENST00000563053 TMOD3Q9NYL9 352 aa20.61■□□□□ 0.89
HIRIP3-202ENST00000563053 SIPA1L3O60292 1781 aaPredicted RBP20.61■□□□□ 0.89
HIRIP3-202ENST00000563053 BRWD3Q6RI45 1802 aa20.61■□□□□ 0.89
HIRIP3-202ENST00000563053 KCNQ2O43526 872 aa20.61■□□□□ 0.89
HIRIP3-202ENST00000563053 KRT27Q7Z3Y8 459 aa20.6■□□□□ 0.89
HIRIP3-202ENST00000563053 PIGBQ92521 554 aa20.6■□□□□ 0.89
HIRIP3-202ENST00000563053 RGS12O14924 1447 aa20.6■□□□□ 0.89
HIRIP3-202ENST00000563053 MRC1P22897 1456 aa20.59■□□□□ 0.89
HIRIP3-202ENST00000563053 PTF1AQ7RTS3 328 aa20.58■□□□□ 0.89
HIRIP3-202ENST00000563053 TCERG1O14776 1098 aaKnown RBP20.58■□□□□ 0.88
HIRIP3-202ENST00000563053 ITGB4P16144 1822 aa20.58■□□□□ 0.88
HIRIP3-202ENST00000563053 ZNF790Q6PG37 636 aa20.57■□□□□ 0.88
HIRIP3-202ENST00000563053 ASAP1Q9ULH1 1129 aa20.57■□□□□ 0.88
HIRIP3-202ENST00000563053 KDM3BQ7LBC6 1761 aa20.56■□□□□ 0.88
HIRIP3-202ENST00000563053 EIF4A1P60842 406 aaKnown RBP20.56■□□□□ 0.88
HIRIP3-202ENST00000563053 TWISTNBQ3B726 338 aaPredicted RBP20.56■□□□□ 0.88
HIRIP3-202ENST00000563053 TTC5Q8N0Z6 440 aa20.56■□□□□ 0.88
HIRIP3-202ENST00000563053 NECTIN2Q92692 538 aa20.56■□□□□ 0.88
HIRIP3-202ENST00000563053 BCL2L13Q9BXK5 485 aa20.56■□□□□ 0.88
HIRIP3-202ENST00000563053 PRAMEF22A3QJZ6 481 aa20.55■□□□□ 0.88
HIRIP3-202ENST00000563053 RCAN3Q9UKA8 241 aa20.55■□□□□ 0.88
HIRIP3-202ENST00000563053 PTCD1O75127 700 aaKnown RBP20.54■□□□□ 0.88
HIRIP3-202ENST00000563053 BABAM1Q9NWV8 329 aa20.54■□□□□ 0.88
HIRIP3-202ENST00000563053 BCL9O00512 1426 aa20.53■□□□□ 0.88
HIRIP3-202ENST00000563053 ZNF496Q96IT1 587 aaPredicted RBP20.53■□□□□ 0.88
HIRIP3-202ENST00000563053 ATG3Q9NT62 314 aa20.53■□□□□ 0.88
HIRIP3-202ENST00000563053 SUPT16HQ9Y5B9 1047 aaKnown RBP20.53■□□□□ 0.88
HIRIP3-202ENST00000563053 VAMP4O75379 141 aa20.52■□□□□ 0.88
HIRIP3-202ENST00000563053 BCAR3O75815 825 aa20.51■□□□□ 0.87
HIRIP3-202ENST00000563053 EIF2S2P20042 333 aaKnown RBP20.51■□□□□ 0.87
HIRIP3-202ENST00000563053 RBM42Q9BTD8 480 aaKnown RBP20.51■□□□□ 0.87
HIRIP3-202ENST00000563053 EP400Q96L91 3159 aa20.5■□□□□ 0.87
HIRIP3-202ENST00000563053 TRIM37O94972 964 aa20.48■□□□□ 0.87
HIRIP3-202ENST00000563053 RARSP54136 660 aaKnown RBP20.48■□□□□ 0.87
HIRIP3-202ENST00000563053 FAM196AQ6ZSG2 479 aa20.48■□□□□ 0.87
HIRIP3-202ENST00000563053 FMNL2Q96PY5 1086 aa20.48■□□□□ 0.87
HIRIP3-202ENST00000563053 PAPPAQ13219 1627 aa20.48■□□□□ 0.87
HIRIP3-202ENST00000563053 GIGYF1O75420 1035 aaPredicted RBP20.48■□□□□ 0.87
HIRIP3-202ENST00000563053 SSH1Q8WYL5 1049 aa20.48■□□□□ 0.87
HIRIP3-202ENST00000563053 KCPQ6ZWJ8 1503 aa20.47■□□□□ 0.87
HIRIP3-202ENST00000563053 PLIN1O60240 522 aa20.47■□□□□ 0.87
HIRIP3-202ENST00000563053 SMC4Q9NTJ3 1288 aa20.47■□□□□ 0.87
HIRIP3-202ENST00000563053 SBF2Q86WG5 1849 aa20.46■□□□□ 0.87
HIRIP3-202ENST00000563053 C5P01031 1676 aa20.45■□□□□ 0.86
HIRIP3-202ENST00000563053 NHSQ6T4R5 1651 aa20.45■□□□□ 0.86
HIRIP3-202ENST00000563053 HDGFL1Q5TGJ6 251 aa20.45■□□□□ 0.86
HIRIP3-202ENST00000563053 USP16Q9Y5T5 823 aa20.45■□□□□ 0.86
HIRIP3-202ENST00000563053 HEG1Q9ULI3 1381 aa20.45■□□□□ 0.86
HIRIP3-202ENST00000563053 PIP4K2AP48426 406 aaPredicted RBP20.45■□□□□ 0.86
HIRIP3-202ENST00000563053 KCNQ4P56696 695 aa20.45■□□□□ 0.86
HIRIP3-202ENST00000563053 IRX6P78412 446 aaPredicted RBP20.45■□□□□ 0.86
HIRIP3-202ENST00000563053 FRAT1Q92837 279 aaPredicted RBP20.45■□□□□ 0.86
HIRIP3-202ENST00000563053 SLC4A9Q96Q91 983 aa20.45■□□□□ 0.86
HIRIP3-202ENST00000563053 PALLDQ8WX93 1383 aa20.44■□□□□ 0.86
HIRIP3-202ENST00000563053 UBR2Q8IWV8 1755 aa20.44■□□□□ 0.86
HIRIP3-202ENST00000563053 ANXA1P04083 346 aa20.44■□□□□ 0.86
HIRIP3-202ENST00000563053 CT47B1P0C2W7 299 aaPredicted RBP20.44■□□□□ 0.86
HIRIP3-202ENST00000563053 BTAF1O14981 1849 aa20.43■□□□□ 0.86
HIRIP3-202ENST00000563053 SNRPA1P09661 255 aaKnown RBP20.43■□□□□ 0.86
HIRIP3-202ENST00000563053 DNAJC10Q8IXB1 793 aa20.42■□□□□ 0.86
HIRIP3-202ENST00000563053 BCL11BQ9C0K0 894 aaPredicted RBP20.42■□□□□ 0.86
HIRIP3-202ENST00000563053 MRPL50Q8N5N7 158 aaKnown RBP20.41■□□□□ 0.86
HIRIP3-202ENST00000563053 CHPF2Q9P2E5 772 aa20.41■□□□□ 0.86
HIRIP3-202ENST00000563053 SLC4A2P04920 1241 aa20.4■□□□□ 0.86
HIRIP3-202ENST00000563053 CANXP27824 592 aaKnown RBP20.4■□□□□ 0.86
HIRIP3-202ENST00000563053 ATP6V1AP38606 617 aa20.4■□□□□ 0.86
HIRIP3-202ENST00000563053 CCDC30Q5VVM6 783 aa20.4■□□□□ 0.86
HIRIP3-202ENST00000563053 TNNQ9UQP3 1299 aa20.4■□□□□ 0.86
HIRIP3-202ENST00000563053 LOC102724428A0A0B4J2F2 783 aa20.39■□□□□ 0.86
HIRIP3-202ENST00000563053 RRP1P56182 461 aaKnown RBP20.39■□□□□ 0.86
HIRIP3-202ENST00000563053 SIK1P57059 783 aa20.39■□□□□ 0.86
HIRIP3-202ENST00000563053 ALDH1L2Q3SY69 923 aa20.39■□□□□ 0.86
HIRIP3-202ENST00000563053 HOXB7P09629 217 aa20.38■□□□□ 0.85
HIRIP3-202ENST00000563053 MYL6BP14649 208 aa20.38■□□□□ 0.85
HIRIP3-202ENST00000563053 PROSER3Q2NL68 480 aa20.38■□□□□ 0.85
HIRIP3-202ENST00000563053 G2E3Q7L622 706 aa20.38■□□□□ 0.85
HIRIP3-202ENST00000563053 SMARCC1Q92922 1105 aaPredicted RBP20.38■□□□□ 0.85
HIRIP3-202ENST00000563053 STK31Q9BXU1 1019 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms