RNA–Protein interactions for RNA: ENST00000562948.1

SCAPER-205, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 2

Gene SCAPER, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-205ENST00000562948 MYH14Q7Z406 1995 aaKnown RBP9.28□□□□□ -0.92
SCAPER-205ENST00000562948 SPATA31A5Q5VU36 1347 aa9.28□□□□□ -0.92
SCAPER-205ENST00000562948 SPATA31A7Q8IWB4 1347 aa9.28□□□□□ -0.92
SCAPER-205ENST00000562948 KCPQ6ZWJ8 1503 aa9.27□□□□□ -0.92
SCAPER-205ENST00000562948 RGS12O14924 1447 aa9.27□□□□□ -0.93
SCAPER-205ENST00000562948 MAPK8IP3Q9UPT6 1336 aa9.27□□□□□ -0.93
SCAPER-205ENST00000562948 HEG1Q9ULI3 1381 aa9.26□□□□□ -0.93
SCAPER-205ENST00000562948 GNAT3A8MTJ3 354 aa9.26□□□□□ -0.93
SCAPER-205ENST00000562948 SLC39A6Q13433 755 aa9.26□□□□□ -0.93
SCAPER-205ENST00000562948 CFAP44Q96MT7 982 aa9.26□□□□□ -0.93
SCAPER-205ENST00000562948 VAMP4O75379 141 aa9.26□□□□□ -0.93
SCAPER-205ENST00000562948 RARSP54136 660 aaKnown RBP9.26□□□□□ -0.93
SCAPER-205ENST00000562948 FAM43AQ8N2R8 423 aa9.25□□□□□ -0.93
SCAPER-205ENST00000562948 MARCH10Q8NA82 808 aaPredicted RBP9.25□□□□□ -0.93
SCAPER-205ENST00000562948 NFATC2IPQ8NCF5 419 aa9.25□□□□□ -0.93
SCAPER-205ENST00000562948 SLC4A9Q96Q91 983 aa9.25□□□□□ -0.93
SCAPER-205ENST00000562948 NCBP3Q53F19 620 aaKnown RBP9.25□□□□□ -0.93
SCAPER-205ENST00000562948 ZNF530Q6P9A1 599 aaPredicted RBP9.25□□□□□ -0.93
SCAPER-205ENST00000562948 E9PSI1 815 aa9.25□□□□□ -0.93
SCAPER-205ENST00000562948 RNMTO43148 476 aaKnown RBP9.25□□□□□ -0.93
SCAPER-205ENST00000562948 SSH1Q8WYL5 1049 aa9.25□□□□□ -0.93
SCAPER-205ENST00000562948 CSB-PGBD3P0DP91 1061 aa9.24□□□□□ -0.93
SCAPER-205ENST00000562948 TJP1Q07157 1748 aa9.24□□□□□ -0.93
SCAPER-205ENST00000562948 RCAN3Q9UKA8 241 aa9.24□□□□□ -0.93
SCAPER-205ENST00000562948 KCNQ2O43526 872 aa9.24□□□□□ -0.93
SCAPER-205ENST00000562948 FAM98CQ17RN3 349 aaKnown RBP9.24□□□□□ -0.93
SCAPER-205ENST00000562948 HAP1P54257 671 aaPredicted RBP9.24□□□□□ -0.93
SCAPER-205ENST00000562948 AKAP4Q5JQC9 854 aa9.24□□□□□ -0.93
SCAPER-205ENST00000562948 UNC5CLQ8IV45 518 aa9.24□□□□□ -0.93
SCAPER-205ENST00000562948 CENPFP49454 3210 aa9.24□□□□□ -0.93
SCAPER-205ENST00000562948 ATRNO75882 1429 aa9.24□□□□□ -0.93
SCAPER-205ENST00000562948 PDE3BQ13370 1112 aa9.23□□□□□ -0.93
SCAPER-205ENST00000562948 AFF2P51816 1311 aa9.23□□□□□ -0.93
SCAPER-205ENST00000562948 BTAF1O14981 1849 aa9.23□□□□□ -0.93
SCAPER-205ENST00000562948 IL2RBP14784 551 aa9.23□□□□□ -0.93
SCAPER-205ENST00000562948 IFT57Q9NWB7 429 aa9.23□□□□□ -0.93
SCAPER-205ENST00000562948 PROSER3Q2NL68 480 aa9.23□□□□□ -0.93
SCAPER-205ENST00000562948 G2E3Q7L622 706 aa9.23□□□□□ -0.93
SCAPER-205ENST00000562948 LRP10Q7Z4F1 713 aa9.23□□□□□ -0.93
SCAPER-205ENST00000562948 DDX54Q8TDD1 881 aaKnown RBP9.23□□□□□ -0.93
SCAPER-205ENST00000562948 IL16Q14005 1332 aa9.23□□□□□ -0.93
SCAPER-205ENST00000562948 SPATA31A6Q5VVP1 1343 aa9.23□□□□□ -0.93
SCAPER-205ENST00000562948 TNS2Q63HR2 1409 aa9.23□□□□□ -0.93
SCAPER-205ENST00000562948 PIP4K2AP48426 406 aaPredicted RBP9.22□□□□□ -0.93
SCAPER-205ENST00000562948 HSP90AA2PQ14568 343 aaPredicted RBP9.22□□□□□ -0.93
SCAPER-205ENST00000562948 SKAP1Q86WV1 359 aa9.22□□□□□ -0.93
SCAPER-205ENST00000562948 NKX1-1Q15270 411 aaPredicted RBP9.22□□□□□ -0.93
SCAPER-205ENST00000562948 NGLY1Q96IV0 654 aa9.22□□□□□ -0.93
SCAPER-205ENST00000562948 RRP1P56182 461 aaKnown RBP9.22□□□□□ -0.93
SCAPER-205ENST00000562948 EVA1CP58658 441 aa9.21□□□□□ -0.93
SCAPER-205ENST00000562948 AMIGO3Q86WK7 504 aa9.21□□□□□ -0.93
SCAPER-205ENST00000562948 FRAT1Q92837 279 aaPredicted RBP9.21□□□□□ -0.93
SCAPER-205ENST00000562948 CACNA1FO60840 1977 aa9.21□□□□□ -0.93
SCAPER-205ENST00000562948 LAMB4A4D0S4 1761 aa9.21□□□□□ -0.93
SCAPER-205ENST00000562948 N4BP2Q86UW6 1770 aaPredicted RBP9.21□□□□□ -0.93
SCAPER-205ENST00000562948 COL5A3P25940 1745 aaPredicted RBP9.21□□□□□ -0.93
SCAPER-205ENST00000562948 A0A0U1RQG5 324 aaPredicted RBP9.21□□□□□ -0.94
SCAPER-205ENST00000562948 ANXA1P04083 346 aa9.21□□□□□ -0.94
SCAPER-205ENST00000562948 EIF4A1P60842 406 aaKnown RBP9.21□□□□□ -0.94
SCAPER-205ENST00000562948 PDIA6Q15084 440 aa9.21□□□□□ -0.94
SCAPER-205ENST00000562948 ZCRB1Q8TBF4 217 aaKnown RBP9.21□□□□□ -0.94
SCAPER-205ENST00000562948 NECTIN2Q92692 538 aa9.21□□□□□ -0.94
SCAPER-205ENST00000562948 USP21Q9UK80 565 aa9.21□□□□□ -0.94
SCAPER-205ENST00000562948 TAF1LQ8IZX4 1826 aa9.21□□□□□ -0.94
SCAPER-205ENST00000562948 KCNQ4P56696 695 aa9.21□□□□□ -0.94
SCAPER-205ENST00000562948 PIGBQ92521 554 aa9.21□□□□□ -0.94
SCAPER-205ENST00000562948 SLC52A2Q9HAB3 445 aa9.21□□□□□ -0.94
SCAPER-205ENST00000562948 ASAP1Q9ULH1 1129 aa9.21□□□□□ -0.94
SCAPER-205ENST00000562948 VPS72Q15906 364 aa9.2□□□□□ -0.94
SCAPER-205ENST00000562948 GAS2L2Q8NHY3 880 aa9.2□□□□□ -0.94
SCAPER-205ENST00000562948 SMIM5Q71RC9 77 aa9.2□□□□□ -0.94
SCAPER-205ENST00000562948 PANK1Q8TE04 598 aa9.2□□□□□ -0.94
SCAPER-205ENST00000562948 RAPGEF4Q8WZA2 1011 aa9.2□□□□□ -0.94
SCAPER-205ENST00000562948 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.2□□□□□ -0.94
SCAPER-205ENST00000562948 ONECUT3O60422 494 aaPredicted RBP9.2□□□□□ -0.94
SCAPER-205ENST00000562948 EXOC6Q8TAG9 804 aa9.2□□□□□ -0.94
SCAPER-205ENST00000562948 ZNF496Q96IT1 587 aaPredicted RBP9.2□□□□□ -0.94
SCAPER-205ENST00000562948 NUP188Q5SRE5 1749 aa9.2□□□□□ -0.94
SCAPER-205ENST00000562948 BCL9O00512 1426 aa9.2□□□□□ -0.94
SCAPER-205ENST00000562948 POTEAQ6S8J7 498 aa9.19□□□□□ -0.94
SCAPER-205ENST00000562948 ZNF428Q96B54 188 aa9.19□□□□□ -0.94
SCAPER-205ENST00000562948 LY75O60449 1722 aa9.19□□□□□ -0.94
SCAPER-205ENST00000562948 TRIM27P14373 513 aa9.19□□□□□ -0.94
SCAPER-205ENST00000562948 TATP17735 454 aaPredicted RBP9.19□□□□□ -0.94
SCAPER-205ENST00000562948 AMOTQ4VCS5 1084 aa9.19□□□□□ -0.94
SCAPER-205ENST00000562948 PLEKHO1Q53GL0 409 aaPredicted RBP9.19□□□□□ -0.94
SCAPER-205ENST00000562948 BRCA2P51587 3418 aa9.19□□□□□ -0.94
SCAPER-205ENST00000562948 TAF7Q15545 349 aaPredicted RBP9.18□□□□□ -0.94
SCAPER-205ENST00000562948 BARGINQ6ZT62 677 aa9.18□□□□□ -0.94
SCAPER-205ENST00000562948 MRPL50Q8N5N7 158 aaKnown RBP9.18□□□□□ -0.94
SCAPER-205ENST00000562948 GJD4Q96KN9 370 aaPredicted RBP9.18□□□□□ -0.94
SCAPER-205ENST00000562948 PHAXQ9H814 394 aaKnown RBP9.18□□□□□ -0.94
SCAPER-205ENST00000562948 USP16Q9Y5T5 823 aa9.18□□□□□ -0.94
SCAPER-205ENST00000562948 NHSQ6T4R5 1651 aa9.18□□□□□ -0.94
SCAPER-205ENST00000562948 TWISTNBQ3B726 338 aaPredicted RBP9.18□□□□□ -0.94
SCAPER-205ENST00000562948 TSPYL4Q9UJ04 414 aa9.18□□□□□ -0.94
SCAPER-205ENST00000562948 ARFGEF2Q9Y6D5 1785 aa9.18□□□□□ -0.94
SCAPER-205ENST00000562948 HTATSF1O43719 755 aaKnown RBP9.18□□□□□ -0.94
SCAPER-205ENST00000562948 GIGYF1O75420 1035 aaPredicted RBP9.18□□□□□ -0.94
SCAPER-205ENST00000562948 ZNF790Q6PG37 636 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms