RNA–Protein interactions for RNA: ENST00000562946.5

TMEM87A-205, Transcript of transmembrane protein 87A, humanhuman

TSL 2

Gene TMEM87A, Length 1,430 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM87A-205ENST00000562946 ZNF827Q17R98 1081 aa11.84□□□□□ -0.51
TMEM87A-205ENST00000562946 ZNF530Q6P9A1 599 aaPredicted RBP11.84□□□□□ -0.51
TMEM87A-205ENST00000562946 AKT1S1Q96B36 256 aa11.84□□□□□ -0.51
TMEM87A-205ENST00000562946 KDM6AO15550 1401 aaPredicted RBP11.83□□□□□ -0.52
TMEM87A-205ENST00000562946 PALLDQ8WX93 1383 aa11.83□□□□□ -0.52
TMEM87A-205ENST00000562946 HSP90AB1P08238 724 aaKnown RBP11.83□□□□□ -0.52
TMEM87A-205ENST00000562946 DCAF5Q96JK2 942 aa11.83□□□□□ -0.52
TMEM87A-205ENST00000562946 CCNL1Q9UK58 526 aaPredicted RBP11.83□□□□□ -0.52
TMEM87A-205ENST00000562946 ERVV-2B6SEH9 535 aa11.82□□□□□ -0.52
TMEM87A-205ENST00000562946 SMARCC1Q92922 1105 aaPredicted RBP11.82□□□□□ -0.52
TMEM87A-205ENST00000562946 TMOD3Q9NYL9 352 aa11.82□□□□□ -0.52
TMEM87A-205ENST00000562946 ZEB1P37275 1124 aaPredicted RBP11.81□□□□□ -0.52
TMEM87A-205ENST00000562946 DDX10Q13206 875 aaKnown RBP11.81□□□□□ -0.52
TMEM87A-205ENST00000562946 C1orf141Q5JVX7 400 aa11.81□□□□□ -0.52
TMEM87A-205ENST00000562946 SPON1Q9HCB6 807 aa11.81□□□□□ -0.52
TMEM87A-205ENST00000562946 ASAP1Q9ULH1 1129 aa11.81□□□□□ -0.52
TMEM87A-205ENST00000562946 ZNF831Q5JPB2 1677 aa11.8□□□□□ -0.52
TMEM87A-205ENST00000562946 ADAMTS7Q9UKP4 1686 aa11.8□□□□□ -0.52
TMEM87A-205ENST00000562946 U2SURPO15042 1029 aaKnown RBP11.8□□□□□ -0.52
TMEM87A-205ENST00000562946 AKAP4Q5JQC9 854 aa11.8□□□□□ -0.52
TMEM87A-205ENST00000562946 CFAP53Q96M91 514 aa11.8□□□□□ -0.52
TMEM87A-205ENST00000562946 ATG3Q9NT62 314 aa11.8□□□□□ -0.52
TMEM87A-205ENST00000562946 COL24A1Q17RW2 1714 aa11.8□□□□□ -0.52
TMEM87A-205ENST00000562946 UBR3Q6ZT12 1888 aa11.8□□□□□ -0.52
TMEM87A-205ENST00000562946 MTHFSDQ2M296 383 aaKnown RBP11.79□□□□□ -0.52
TMEM87A-205ENST00000562946 ZBTB12Q9Y330 459 aaPredicted RBP11.79□□□□□ -0.52
TMEM87A-205ENST00000562946 C4BP0C0L5 1744 aa11.79□□□□□ -0.52
TMEM87A-205ENST00000562946 LOC102724428A0A0B4J2F2 783 aa11.78□□□□□ -0.52
TMEM87A-205ENST00000562946 ZBTB7AO95365 584 aa11.78□□□□□ -0.52
TMEM87A-205ENST00000562946 SIK1P57059 783 aa11.78□□□□□ -0.52
TMEM87A-205ENST00000562946 TFCP2L1Q9NZI6 479 aa11.78□□□□□ -0.52
TMEM87A-205ENST00000562946 PNPLA7Q6ZV29 1317 aa11.78□□□□□ -0.52
TMEM87A-205ENST00000562946 MYH14Q7Z406 1995 aaKnown RBP11.78□□□□□ -0.52
TMEM87A-205ENST00000562946 PTGER2P43116 358 aa11.77□□□□□ -0.52
TMEM87A-205ENST00000562946 CABP4P57796 275 aa11.77□□□□□ -0.52
TMEM87A-205ENST00000562946 NFATC2IPQ8NCF5 419 aa11.77□□□□□ -0.52
TMEM87A-205ENST00000562946 MTFR1LQ9H019 292 aa11.77□□□□□ -0.52
TMEM87A-205ENST00000562946 LGR6Q9HBX8 967 aa11.77□□□□□ -0.52
TMEM87A-205ENST00000562946 NUDCQ9Y266 331 aa11.77□□□□□ -0.52
TMEM87A-205ENST00000562946 COL5A3P25940 1745 aaPredicted RBP11.77□□□□□ -0.53
TMEM87A-205ENST00000562946 HMGB2P26583 209 aaKnown RBP11.77□□□□□ -0.53
TMEM87A-205ENST00000562946 SGIP1Q9BQI5 828 aa11.77□□□□□ -0.53
TMEM87A-205ENST00000562946 RSPH6AQ9H0K4 717 aa11.77□□□□□ -0.53
TMEM87A-205ENST00000562946 FBXO3Q9UK99 471 aa11.77□□□□□ -0.53
TMEM87A-205ENST00000562946 SIPA1L3O60292 1781 aaPredicted RBP11.76□□□□□ -0.53
TMEM87A-205ENST00000562946 RNMTO43148 476 aaKnown RBP11.76□□□□□ -0.53
TMEM87A-205ENST00000562946 ITPK1Q13572 414 aa11.76□□□□□ -0.53
TMEM87A-205ENST00000562946 SLC16A10Q8TF71 515 aa11.76□□□□□ -0.53
TMEM87A-205ENST00000562946 PHACTR3Q96KR7 559 aa11.76□□□□□ -0.53
TMEM87A-205ENST00000562946 SLC4A9Q96Q91 983 aa11.76□□□□□ -0.53
TMEM87A-205ENST00000562946 SLC52A2Q9HAB3 445 aa11.76□□□□□ -0.53
TMEM87A-205ENST00000562946 MRC1P22897 1456 aa11.76□□□□□ -0.53
TMEM87A-205ENST00000562946 DLG5Q8TDM6 1919 aa11.75□□□□□ -0.53
TMEM87A-205ENST00000562946 U2AF1L5P0DN76 240 aaPredicted RBP11.75□□□□□ -0.53
TMEM87A-205ENST00000562946 PRKAR2BP31323 418 aa11.75□□□□□ -0.53
TMEM87A-205ENST00000562946 ATP6V1AP38606 617 aa11.75□□□□□ -0.53
TMEM87A-205ENST00000562946 U2AF1Q01081 240 aaKnown RBP eCLIP11.75□□□□□ -0.53
TMEM87A-205ENST00000562946 RALBP1Q15311 655 aa11.75□□□□□ -0.53
TMEM87A-205ENST00000562946 COL23A1Q86Y22 540 aaPredicted RBP11.75□□□□□ -0.53
TMEM87A-205ENST00000562946 LINC00116Q8NCU8 138 aa11.75□□□□□ -0.53
TMEM87A-205ENST00000562946 FCHSD2O94868 740 aa11.74□□□□□ -0.53
TMEM87A-205ENST00000562946 AMIGO3Q86WK7 504 aa11.74□□□□□ -0.53
TMEM87A-205ENST00000562946 GAS2L2Q8NHY3 880 aa11.74□□□□□ -0.53
TMEM87A-205ENST00000562946 CICQ96RK0 1608 aaPredicted RBP11.74□□□□□ -0.53
TMEM87A-205ENST00000562946 TJP1Q07157 1748 aa11.73□□□□□ -0.53
TMEM87A-205ENST00000562946 IL17REQ8NFR9 667 aa11.73□□□□□ -0.53
TMEM87A-205ENST00000562946 RBM42Q9BTD8 480 aaKnown RBP11.73□□□□□ -0.53
TMEM87A-205ENST00000562946 PPP1R1BQ9UD71 204 aaPredicted RBP11.73□□□□□ -0.53
TMEM87A-205ENST00000562946 UBR2Q8IWV8 1755 aa11.73□□□□□ -0.53
TMEM87A-205ENST00000562946 MAP3K5Q99683 1374 aa11.72□□□□□ -0.53
TMEM87A-205ENST00000562946 GNAT3A8MTJ3 354 aa11.72□□□□□ -0.53
TMEM87A-205ENST00000562946 AK7Q96M32 723 aa11.72□□□□□ -0.53
TMEM87A-205ENST00000562946 PTCD1O75127 700 aaKnown RBP11.71□□□□□ -0.53
TMEM87A-205ENST00000562946 SMIM5Q71RC9 77 aa11.71□□□□□ -0.53
TMEM87A-205ENST00000562946 FLAD1Q8NFF5 587 aa11.71□□□□□ -0.53
TMEM87A-205ENST00000562946 CEMIPQ8WUJ3 1361 aa11.71□□□□□ -0.54
TMEM87A-205ENST00000562946 SSFA2P28290 1259 aa11.7□□□□□ -0.54
TMEM87A-205ENST00000562946 SLC39A6Q13433 755 aa11.7□□□□□ -0.54
TMEM87A-205ENST00000562946 RC3H1Q5TC82 1133 aaKnown RBP11.7□□□□□ -0.54
TMEM87A-205ENST00000562946 MYBBP1AQ9BQG0 1328 aaKnown RBP11.7□□□□□ -0.54
TMEM87A-205ENST00000562946 KCPQ6ZWJ8 1503 aa11.7□□□□□ -0.54
TMEM87A-205ENST00000562946 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.69□□□□□ -0.54
TMEM87A-205ENST00000562946 VASPP50552 380 aaPredicted RBP11.69□□□□□ -0.54
TMEM87A-205ENST00000562946 ARXQ96QS3 562 aa11.69□□□□□ -0.54
TMEM87A-205ENST00000562946 PLEKHF1Q96S99 279 aa11.69□□□□□ -0.54
TMEM87A-205ENST00000562946 C4AP0C0L4 1744 aa11.69□□□□□ -0.54
TMEM87A-205ENST00000562946 GNPATO15228 680 aa11.69□□□□□ -0.54
TMEM87A-205ENST00000562946 PHF14O94880 888 aa11.69□□□□□ -0.54
TMEM87A-205ENST00000562946 FHDC1Q9C0D6 1143 aaPredicted RBP11.69□□□□□ -0.54
TMEM87A-205ENST00000562946 PRKRIP1Q9H875 184 aaPredicted RBP11.69□□□□□ -0.54
TMEM87A-205ENST00000562946 CNTNAP4Q9C0A0 1308 aa11.68□□□□□ -0.54
TMEM87A-205ENST00000562946 TEFQ10587 303 aa11.68□□□□□ -0.54
TMEM87A-205ENST00000562946 SYT17Q9BSW7 474 aa11.68□□□□□ -0.54
TMEM87A-205ENST00000562946 HTATSF1O43719 755 aaKnown RBP11.67□□□□□ -0.54
TMEM87A-205ENST00000562946 RPS6KA4O75676 772 aa11.67□□□□□ -0.54
TMEM87A-205ENST00000562946 POLD1P28340 1107 aa11.67□□□□□ -0.54
TMEM87A-205ENST00000562946 CRKLP46109 303 aaKnown RBP11.67□□□□□ -0.54
TMEM87A-205ENST00000562946 MSL1Q68DK7 614 aa11.67□□□□□ -0.54
TMEM87A-205ENST00000562946 DNAJC10Q8IXB1 793 aa11.67□□□□□ -0.54
TMEM87A-205ENST00000562946 RTCBQ9Y3I0 505 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms