RNA–Protein interactions for RNA: ENST00000562836.5

CDH1-205, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 2,759 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-205ENST00000562836 RRBP1Q9P2E9 1410 aaKnown RBP11.14□□□□□ -0.63
CDH1-205ENST00000562836 GPT2Q8TD30 523 aa11.14□□□□□ -0.63
CDH1-205ENST00000562836 SMC2O95347 1197 aa11.14□□□□□ -0.63
CDH1-205ENST00000562836 NOM1Q5C9Z4 860 aaKnown RBP11.14□□□□□ -0.63
CDH1-205ENST00000562836 CRACR2AQ9BSW2 395 aa11.14□□□□□ -0.63
CDH1-205ENST00000562836 TRAIPQ9BWF2 469 aa11.14□□□□□ -0.63
CDH1-205ENST00000562836 ERICH3Q5RHP9 1530 aa11.14□□□□□ -0.63
CDH1-205ENST00000562836 EME2A4GXA9 379 aaPredicted RBP11.13□□□□□ -0.63
CDH1-205ENST00000562836 TPM1P09493 284 aa11.13□□□□□ -0.63
CDH1-205ENST00000562836 BDNFP23560 247 aa11.13□□□□□ -0.63
CDH1-205ENST00000562836 KIAA2012Q0VF49 1180 aa11.13□□□□□ -0.63
CDH1-205ENST00000562836 NEUROD2Q15784 382 aa11.13□□□□□ -0.63
CDH1-205ENST00000562836 SPC24Q8NBT2 197 aa11.13□□□□□ -0.63
CDH1-205ENST00000562836 NEK11Q8NG66 645 aa11.13□□□□□ -0.63
CDH1-205ENST00000562836 SMCR8Q8TEV9 937 aaPredicted RBP11.13□□□□□ -0.63
CDH1-205ENST00000562836 ZNF483Q8TF39 744 aaPredicted RBP11.13□□□□□ -0.63
CDH1-205ENST00000562836 KCNB2Q92953 911 aa11.13□□□□□ -0.63
CDH1-205ENST00000562836 CENPOQ9BU64 300 aa11.13□□□□□ -0.63
CDH1-205ENST00000562836 KLHL42Q9P2K6 505 aa11.13□□□□□ -0.63
CDH1-205ENST00000562836 MCM6Q14566 821 aa11.13□□□□□ -0.63
CDH1-205ENST00000562836 SPRYD3Q8NCJ5 442 aa11.13□□□□□ -0.63
CDH1-205ENST00000562836 RSPH1Q8WYR4 309 aa11.13□□□□□ -0.63
CDH1-205ENST00000562836 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.13□□□□□ -0.63
CDH1-205ENST00000562836 DIS3Q9Y2L1 958 aaKnown RBP11.13□□□□□ -0.63
CDH1-205ENST00000562836 RRP15Q9Y3B9 282 aaKnown RBP11.13□□□□□ -0.63
CDH1-205ENST00000562836 SF3B2Q13435 895 aaKnown RBP11.12□□□□□ -0.63
CDH1-205ENST00000562836 SRLQ86TD4 932 aa11.12□□□□□ -0.63
CDH1-205ENST00000562836 TRIM42Q8IWZ5 723 aa11.12□□□□□ -0.63
CDH1-205ENST00000562836 KIF18AQ8NI77 898 aa11.12□□□□□ -0.63
CDH1-205ENST00000562836 AGAP3Q96P47 875 aa11.12□□□□□ -0.63
CDH1-205ENST00000562836 LRRC27Q9C0I9 530 aa11.12□□□□□ -0.63
CDH1-205ENST00000562836 CHMP5Q9NZZ3 219 aa11.12□□□□□ -0.63
CDH1-205ENST00000562836 NRBP1Q9UHY1 535 aa11.12□□□□□ -0.63
CDH1-205ENST00000562836 RNF123Q5XPI4 1314 aa11.12□□□□□ -0.63
CDH1-205ENST00000562836 TPP2P29144 1249 aaPredicted RBP11.12□□□□□ -0.63
CDH1-205ENST00000562836 ZNF394Q53GI3 561 aa11.12□□□□□ -0.63
CDH1-205ENST00000562836 TMEM110Q86TL2 294 aa11.12□□□□□ -0.63
CDH1-205ENST00000562836 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.12□□□□□ -0.63
CDH1-205ENST00000562836 RNF214Q8ND24 703 aa11.12□□□□□ -0.63
CDH1-205ENST00000562836 RETREG1Q9H6L5 497 aa11.12□□□□□ -0.63
CDH1-205ENST00000562836 TBC1D7Q9P0N9 293 aa11.12□□□□□ -0.63
CDH1-205ENST00000562836 FMNL1O95466 1100 aaPredicted RBP11.11□□□□□ -0.63
CDH1-205ENST00000562836 TSNAXIP1Q2TAA8 658 aa11.11□□□□□ -0.63
CDH1-205ENST00000562836 DRAXINQ8NBI3 349 aaPredicted RBP11.11□□□□□ -0.63
CDH1-205ENST00000562836 CCNHP51946 323 aaPredicted RBP11.11□□□□□ -0.63
CDH1-205ENST00000562836 USP4Q13107 963 aa11.11□□□□□ -0.63
CDH1-205ENST00000562836 FMNL3Q8IVF7 1028 aa11.11□□□□□ -0.63
CDH1-205ENST00000562836 STAG2Q8N3U4 1231 aa11.11□□□□□ -0.63
CDH1-205ENST00000562836 PLEKHG4BQ96PX9 1271 aa11.11□□□□□ -0.63
CDH1-205ENST00000562836 UTP6Q9NYH9 597 aaKnown RBP11.11□□□□□ -0.63
CDH1-205ENST00000562836 TIMM44O43615 452 aa11.11□□□□□ -0.63
CDH1-205ENST00000562836 IMPDH2P12268 514 aa11.11□□□□□ -0.63
CDH1-205ENST00000562836 APLP1P51693 650 aa11.11□□□□□ -0.63
CDH1-205ENST00000562836 RBM6P78332 1123 aaKnown RBP11.11□□□□□ -0.63
CDH1-205ENST00000562836 SLC5A9Q2M3M2 681 aa11.11□□□□□ -0.63
CDH1-205ENST00000562836 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.1□□□□□ -0.63
CDH1-205ENST00000562836 CCDC175P0C221 793 aa11.1□□□□□ -0.63
CDH1-205ENST00000562836 KCNA1Q09470 495 aa11.1□□□□□ -0.63
CDH1-205ENST00000562836 TRIM11Q96F44 468 aa11.1□□□□□ -0.63
CDH1-205ENST00000562836 PDE6BP35913 854 aa11.1□□□□□ -0.63
CDH1-205ENST00000562836 MAGEA9P43362 315 aa11.1□□□□□ -0.63
CDH1-205ENST00000562836 PDCD2Q16342 344 aaPredicted RBP11.1□□□□□ -0.63
CDH1-205ENST00000562836 MMS22LQ6ZRQ5 1243 aa11.1□□□□□ -0.63
CDH1-205ENST00000562836 NLRP13Q86W25 1043 aa11.1□□□□□ -0.63
CDH1-205ENST00000562836 NACA2Q9H009 215 aa11.1□□□□□ -0.63
CDH1-205ENST00000562836 MKS1Q9NXB0 559 aa11.1□□□□□ -0.63
CDH1-205ENST00000562836 ARAP1Q96P48 1450 aa11.09□□□□□ -0.63
CDH1-205ENST00000562836 TOP2BQ02880 1626 aa11.09□□□□□ -0.63
CDH1-205ENST00000562836 SLC27A2O14975 620 aa11.09□□□□□ -0.63
CDH1-205ENST00000562836 PYGBP11216 843 aa11.09□□□□□ -0.63
CDH1-205ENST00000562836 ZNF24P17028 368 aa11.09□□□□□ -0.63
CDH1-205ENST00000562836 PSMC1P62191 440 aaKnown RBP11.09□□□□□ -0.63
CDH1-205ENST00000562836 PMM1Q92871 262 aa11.09□□□□□ -0.63
CDH1-205ENST00000562836 IRX2Q9BZI1 471 aaPredicted RBP11.09□□□□□ -0.63
CDH1-205ENST00000562836 SPATS2LQ9NUQ6 558 aaKnown RBP11.09□□□□□ -0.63
CDH1-205ENST00000562836 N6AMT1Q9Y5N5 214 aa11.09□□□□□ -0.63
CDH1-205ENST00000562836 MRFAP1Q9Y605 127 aa11.09□□□□□ -0.63
CDH1-205ENST00000562836 UNCXA6NJT0 531 aa11.09□□□□□ -0.63
CDH1-205ENST00000562836 HTATSF1O43719 755 aaKnown RBP11.09□□□□□ -0.63
CDH1-205ENST00000562836 RBBP5Q15291 538 aaKnown RBP11.09□□□□□ -0.63
CDH1-205ENST00000562836 C8orf34Q49A92 452 aa11.09□□□□□ -0.63
CDH1-205ENST00000562836 CCDC186Q7Z3E2 898 aa11.09□□□□□ -0.63
CDH1-205ENST00000562836 METTL14Q9HCE5 456 aaKnown RBP11.09□□□□□ -0.63
CDH1-205ENST00000562836 CCDC39Q9UFE4 941 aa11.09□□□□□ -0.63
CDH1-205ENST00000562836 NUDCQ9Y266 331 aa11.09□□□□□ -0.63
CDH1-205ENST00000562836 DDX11L8A8MPP1 907 aa11.08□□□□□ -0.64
CDH1-205ENST00000562836 TRPC1P48995 793 aa11.08□□□□□ -0.64
CDH1-205ENST00000562836 GIMAP7Q8NHV1 300 aa11.08□□□□□ -0.64
CDH1-205ENST00000562836 PRXQ9BXM0 1461 aa11.08□□□□□ -0.64
CDH1-205ENST00000562836 SNUPNO95149 360 aaKnown RBP11.08□□□□□ -0.64
CDH1-205ENST00000562836 ZBED6P86452 979 aa11.08□□□□□ -0.64
CDH1-205ENST00000562836 PRPF4BQ13523 1007 aaKnown RBP11.08□□□□□ -0.64
CDH1-205ENST00000562836 TBC1D5Q92609 795 aa11.08□□□□□ -0.64
CDH1-205ENST00000562836 PDLIM2Q96JY6 352 aa11.08□□□□□ -0.64
CDH1-205ENST00000562836 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.08□□□□□ -0.64
CDH1-205ENST00000562836 KIF5CO60282 957 aa11.07□□□□□ -0.64
CDH1-205ENST00000562836 NCBP1Q09161 790 aaKnown RBP11.07□□□□□ -0.64
CDH1-205ENST00000562836 GRIK3Q13003 919 aa11.07□□□□□ -0.64
CDH1-205ENST00000562836 SFMBT2Q5VUG0 894 aa11.07□□□□□ -0.64
CDH1-205ENST00000562836 ARHGAP27Q6ZUM4 889 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms