RNA–Protein interactions for RNA: ENST00000562785.1

CHD9-205, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 359 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-205ENST00000562785 KDF1Q8NAX2 398 aaPredicted RBP9.93□□□□□ -0.82
CHD9-205ENST00000562785 SLC4A9Q96Q91 983 aa9.93□□□□□ -0.82
CHD9-205ENST00000562785 HINFPQ9BQA5 517 aa9.93□□□□□ -0.82
CHD9-205ENST00000562785 ARHGEF10LQ9HCE6 1279 aa9.93□□□□□ -0.82
CHD9-205ENST00000562785 ZFAND3Q9H8U3 227 aa9.92□□□□□ -0.82
CHD9-205ENST00000562785 PRIMPOLQ96LW4 560 aa9.91□□□□□ -0.82
CHD9-205ENST00000562785 GZF1Q9H116 711 aaPredicted RBP9.91□□□□□ -0.82
CHD9-205ENST00000562785 RAB6BQ9NRW1 208 aa9.91□□□□□ -0.82
CHD9-205ENST00000562785 IL2RAP01589 272 aa9.9□□□□□ -0.82
CHD9-205ENST00000562785 ARID4AP29374 1257 aaPredicted RBP9.9□□□□□ -0.82
CHD9-205ENST00000562785 CCER1Q8TC90 406 aaPredicted RBP9.9□□□□□ -0.82
CHD9-205ENST00000562785 XAGE2Q96GT9 111 aa9.9□□□□□ -0.82
CHD9-205ENST00000562785 SERTAD1Q9UHV2 236 aa9.9□□□□□ -0.82
CHD9-205ENST00000562785 LGR5O75473 907 aa9.89□□□□□ -0.83
CHD9-205ENST00000562785 IGFBP4P22692 258 aa9.89□□□□□ -0.83
CHD9-205ENST00000562785 CLN3Q13286 438 aa9.89□□□□□ -0.83
CHD9-205ENST00000562785 MTFR1Q15390 333 aa9.89□□□□□ -0.83
CHD9-205ENST00000562785 TAS1R3Q7RTX0 852 aa9.89□□□□□ -0.83
CHD9-205ENST00000562785 TNS4Q8IZW8 715 aa9.89□□□□□ -0.83
CHD9-205ENST00000562785 MEIOBQ8N635 442 aa9.89□□□□□ -0.83
CHD9-205ENST00000562785 HRH3Q9Y5N1 445 aa9.89□□□□□ -0.83
CHD9-205ENST00000562785 PTGIRP43119 386 aa9.88□□□□□ -0.83
CHD9-205ENST00000562785 FOXK2Q01167 660 aa9.88□□□□□ -0.83
CHD9-205ENST00000562785 HPS1Q92902 700 aa9.88□□□□□ -0.83
CHD9-205ENST00000562785 CNKSR1Q969H4 720 aa9.88□□□□□ -0.83
CHD9-205ENST00000562785 ESYT1Q9BSJ8 1104 aa9.88□□□□□ -0.83
CHD9-205ENST00000562785 A0A1W2PRU2 124 aa9.87□□□□□ -0.83
CHD9-205ENST00000562785 A6NJY4 79 aa9.87□□□□□ -0.83
CHD9-205ENST00000562785 SMTNP53814 917 aa9.87□□□□□ -0.83
CHD9-205ENST00000562785 AGBL1Q96MI9 1066 aa9.87□□□□□ -0.83
CHD9-205ENST00000562785 TSPAN10Q9H1Z9 355 aaPredicted RBP9.87□□□□□ -0.83
CHD9-205ENST00000562785 SCHIP1Q9P0W5 487 aaPredicted RBP9.87□□□□□ -0.83
CHD9-205ENST00000562785 FOXO3O43524 673 aa9.86□□□□□ -0.83
CHD9-205ENST00000562785 FKBP5Q13451 457 aaPredicted RBP9.86□□□□□ -0.83
CHD9-205ENST00000562785 GAS2L2Q8NHY3 880 aa9.86□□□□□ -0.83
CHD9-205ENST00000562785 C21orf2O43822 256 aa9.85□□□□□ -0.83
CHD9-205ENST00000562785 SCNN1AP37088 669 aa9.85□□□□□ -0.83
CHD9-205ENST00000562785 RELBQ01201 579 aa9.85□□□□□ -0.83
CHD9-205ENST00000562785 TLR1Q15399 786 aa9.85□□□□□ -0.83
CHD9-205ENST00000562785 TMCO4Q5TGY1 634 aa9.85□□□□□ -0.83
CHD9-205ENST00000562785 SND1Q7KZF4 910 aaKnown RBP eCLIP9.85□□□□□ -0.83
CHD9-205ENST00000562785 SCG3Q8WXD2 468 aaKnown RBP9.85□□□□□ -0.83
CHD9-205ENST00000562785 COL26A1Q96A83 441 aa9.85□□□□□ -0.83
CHD9-205ENST00000562785 PDZRN3Q9UPQ7 1066 aa9.85□□□□□ -0.83
CHD9-205ENST00000562785 MTMR7Q9Y216 660 aa9.85□□□□□ -0.83
CHD9-205ENST00000562785 CCDC9Q9Y3X0 531 aaKnown RBP9.85□□□□□ -0.83
CHD9-205ENST00000562785 SLC9A9Q8IVB4 645 aa9.84□□□□□ -0.83
CHD9-205ENST00000562785 PURBQ96QR8 312 aaKnown RBP9.84□□□□□ -0.83
CHD9-205ENST00000562785 FHDC1Q9C0D6 1143 aaPredicted RBP9.84□□□□□ -0.83
CHD9-205ENST00000562785 IQSEC3Q9UPP2 1182 aaPredicted RBP9.84□□□□□ -0.83
CHD9-205ENST00000562785 ATAD2Q6PL18 1390 aa9.84□□□□□ -0.83
CHD9-205ENST00000562785 CDK2AP1O14519 115 aa9.83□□□□□ -0.84
CHD9-205ENST00000562785 SERPINB4P48594 390 aa9.83□□□□□ -0.84
CHD9-205ENST00000562785 STAG2Q8N3U4 1231 aa9.83□□□□□ -0.84
CHD9-205ENST00000562785 MEN1O00255 615 aa9.82□□□□□ -0.84
CHD9-205ENST00000562785 CAPN5O15484 640 aaPredicted RBP9.82□□□□□ -0.84
CHD9-205ENST00000562785 PTCD1O75127 700 aaKnown RBP9.82□□□□□ -0.84
CHD9-205ENST00000562785 CENPCQ03188 943 aa9.82□□□□□ -0.84
CHD9-205ENST00000562785 NBPF15Q8N660 670 aa9.82□□□□□ -0.84
CHD9-205ENST00000562785 NLRP3Q96P20 1036 aa9.82□□□□□ -0.84
CHD9-205ENST00000562785 TSEN34Q9BSV6 310 aaKnown RBP9.82□□□□□ -0.84
CHD9-205ENST00000562785 MKNK1Q9BUB5 465 aa9.82□□□□□ -0.84
CHD9-205ENST00000562785 PPP1R12BO60237 982 aaPredicted RBP9.81□□□□□ -0.84
CHD9-205ENST00000562785 POTEAQ6S8J7 498 aa9.81□□□□□ -0.84
CHD9-205ENST00000562785 ZNF395Q9H8N7 513 aaPredicted RBP9.81□□□□□ -0.84
CHD9-205ENST00000562785 EGFL7Q9UHF1 273 aa9.81□□□□□ -0.84
CHD9-205ENST00000562785 USP3Q9Y6I4 520 aa9.81□□□□□ -0.84
CHD9-205ENST00000562785 SOWAHDA6NJG2 315 aa9.8□□□□□ -0.84
CHD9-205ENST00000562785 AVPP01185 164 aa9.8□□□□□ -0.84
CHD9-205ENST00000562785 GPC1P35052 558 aa9.8□□□□□ -0.84
CHD9-205ENST00000562785 PSMA6P60900 246 aaKnown RBP9.8□□□□□ -0.84
CHD9-205ENST00000562785 TBCELQ5QJ74 424 aa9.8□□□□□ -0.84
CHD9-205ENST00000562785 ZNF295-AS1Q8N0V1 137 aa9.8□□□□□ -0.84
CHD9-205ENST00000562785 LINC00528Q8N1L1 170 aa9.8□□□□□ -0.84
CHD9-205ENST00000562785 SEPT3Q9UH03 358 aa9.8□□□□□ -0.84
CHD9-205ENST00000562785 FAM187AA6NFU0 413 aa9.79□□□□□ -0.84
CHD9-205ENST00000562785 SPINT1O43278 529 aa9.79□□□□□ -0.84
CHD9-205ENST00000562785 CAPN12Q6ZSI9 719 aa9.79□□□□□ -0.84
CHD9-205ENST00000562785 C2orf49Q9BVC5 232 aaPredicted RBP9.79□□□□□ -0.84
CHD9-205ENST00000562785 PPARGC1BQ86YN6 1023 aaKnown RBP9.78□□□□□ -0.84
CHD9-205ENST00000562785 CHMP7Q8WUX9 453 aaPredicted RBP9.78□□□□□ -0.84
CHD9-205ENST00000562785 ZSCAN10Q96SZ4 725 aaPredicted RBP9.78□□□□□ -0.84
CHD9-205ENST00000562785 UPP2O95045 317 aa9.77□□□□□ -0.85
CHD9-205ENST00000562785 RNF144AP50876 292 aaPredicted RBP9.77□□□□□ -0.85
CHD9-205ENST00000562785 HIRAP54198 1017 aaPredicted RBP9.77□□□□□ -0.85
CHD9-205ENST00000562785 MFAP1P55081 439 aaKnown RBP9.77□□□□□ -0.85
CHD9-205ENST00000562785 VTI1AQ96AJ9 217 aa9.77□□□□□ -0.85
CHD9-205ENST00000562785 INSM2Q96T92 566 aaPredicted RBP9.77□□□□□ -0.85
CHD9-205ENST00000562785 TEAD4Q15561 434 aa9.76□□□□□ -0.85
CHD9-205ENST00000562785 ZDHHC1Q8WTX9 485 aa9.76□□□□□ -0.85
CHD9-205ENST00000562785 GTF3C2Q8WUA4 911 aaPredicted RBP9.76□□□□□ -0.85
CHD9-205ENST00000562785 GRIP2Q9C0E4 1043 aa9.76□□□□□ -0.85
CHD9-205ENST00000562785 CHMP3Q9Y3E7 222 aa9.76□□□□□ -0.85
CHD9-205ENST00000562785 EML1O00423 815 aa9.75□□□□□ -0.85
CHD9-205ENST00000562785 ABL1P00519 1130 aa9.75□□□□□ -0.85
CHD9-205ENST00000562785 ZNF211Q13398 564 aaPredicted RBP9.75□□□□□ -0.85
CHD9-205ENST00000562785 FOXD4L5Q5VV16 416 aaPredicted RBP9.75□□□□□ -0.85
CHD9-205ENST00000562785 MRPL14Q6P1L8 145 aaKnown RBP9.75□□□□□ -0.85
CHD9-205ENST00000562785 HELQQ8TDG4 1101 aa9.75□□□□□ -0.85
CHD9-205ENST00000562785 RHBDD1Q8TEB9 315 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms