RNA–Protein interactions for RNA: ENST00000562729.5

CHRFAM7A-204, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 4

Gene CHRFAM7A, Length 573 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-204ENST00000562729 KIF12Q96FN5 646 aa12.65□□□□□ -0.38
CHRFAM7A-204ENST00000562729 SPON1Q9HCB6 807 aa12.65□□□□□ -0.38
CHRFAM7A-204ENST00000562729 POTEMA6NI47 508 aa12.64□□□□□ -0.39
CHRFAM7A-204ENST00000562729 ATN1P54259 1190 aaPredicted RBP12.63□□□□□ -0.39
CHRFAM7A-204ENST00000562729 SLC15A2Q16348 729 aa12.63□□□□□ -0.39
CHRFAM7A-204ENST00000562729 EYA1Q99502 592 aa12.63□□□□□ -0.39
CHRFAM7A-204ENST00000562729 ANO8Q9HCE9 1232 aaPredicted RBP12.63□□□□□ -0.39
CHRFAM7A-204ENST00000562729 SHANK3Q9BYB0 1731 aa12.62□□□□□ -0.39
CHRFAM7A-204ENST00000562729 EIF4A2Q14240 407 aaKnown RBP12.62□□□□□ -0.39
CHRFAM7A-204ENST00000562729 SLC27A3Q5K4L6 730 aa12.62□□□□□ -0.39
CHRFAM7A-204ENST00000562729 MPRIPQ6WCQ1 1025 aa12.62□□□□□ -0.39
CHRFAM7A-204ENST00000562729 ZBTB7AO95365 584 aa12.61□□□□□ -0.39
CHRFAM7A-204ENST00000562729 CC2D1BQ5T0F9 858 aaKnown RBP12.61□□□□□ -0.39
CHRFAM7A-204ENST00000562729 HMGB2P26583 209 aaKnown RBP12.6□□□□□ -0.39
CHRFAM7A-204ENST00000562729 CCNL1Q9UK58 526 aaPredicted RBP12.6□□□□□ -0.39
CHRFAM7A-204ENST00000562729 POTEGQ6S5H5 508 aa12.59□□□□□ -0.39
CHRFAM7A-204ENST00000562729 IFNL2Q8IZJ0 200 aa12.59□□□□□ -0.39
CHRFAM7A-204ENST00000562729 TFCP2L1Q9NZI6 479 aa12.59□□□□□ -0.39
CHRFAM7A-204ENST00000562729 PKD1L3Q7Z443 1732 aa12.59□□□□□ -0.39
CHRFAM7A-204ENST00000562729 CYP27B1O15528 508 aa12.58□□□□□ -0.4
CHRFAM7A-204ENST00000562729 KCNQ4P56696 695 aa12.58□□□□□ -0.4
CHRFAM7A-204ENST00000562729 PLEKHO1Q53GL0 409 aaPredicted RBP12.58□□□□□ -0.4
CHRFAM7A-204ENST00000562729 MIER1Q8N108 512 aa12.58□□□□□ -0.4
CHRFAM7A-204ENST00000562729 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.58□□□□□ -0.4
CHRFAM7A-204ENST00000562729 TMOD3Q9NYL9 352 aa12.58□□□□□ -0.4
CHRFAM7A-204ENST00000562729 TRPC6Q9Y210 931 aa12.58□□□□□ -0.4
CHRFAM7A-204ENST00000562729 AMER1Q5JTC6 1135 aaPredicted RBP12.57□□□□□ -0.4
CHRFAM7A-204ENST00000562729 C1orf141Q5JVX7 400 aa12.57□□□□□ -0.4
CHRFAM7A-204ENST00000562729 SMARCC1Q92922 1105 aaPredicted RBP12.57□□□□□ -0.4
CHRFAM7A-204ENST00000562729 BMP2KQ9NSY1 1161 aaPredicted RBP12.57□□□□□ -0.4
CHRFAM7A-204ENST00000562729 LRRC4BQ9NT99 713 aa12.57□□□□□ -0.4
CHRFAM7A-204ENST00000562729 IGSF1Q8N6C5 1336 aa12.57□□□□□ -0.4
CHRFAM7A-204ENST00000562729 HSP90AB1P08238 724 aaKnown RBP12.56□□□□□ -0.4
CHRFAM7A-204ENST00000562729 MTHFSP49914 203 aa12.56□□□□□ -0.4
CHRFAM7A-204ENST00000562729 AMOTQ4VCS5 1084 aa12.56□□□□□ -0.4
CHRFAM7A-204ENST00000562729 SULT6B1Q6IMI4 303 aa12.56□□□□□ -0.4
CHRFAM7A-204ENST00000562729 MAMSTRQ6ZN01 415 aa12.56□□□□□ -0.4
CHRFAM7A-204ENST00000562729 RASEFQ8IZ41 740 aa12.56□□□□□ -0.4
CHRFAM7A-204ENST00000562729 PDGFDQ9GZP0 370 aaPredicted RBP12.56□□□□□ -0.4
CHRFAM7A-204ENST00000562729 MTFR1LQ9H019 292 aa12.56□□□□□ -0.4
CHRFAM7A-204ENST00000562729 CASZ1Q86V15 1759 aa12.56□□□□□ -0.4
CHRFAM7A-204ENST00000562729 PALLDQ8WX93 1383 aa12.56□□□□□ -0.4
CHRFAM7A-204ENST00000562729 NCAPD2Q15021 1401 aa12.55□□□□□ -0.4
CHRFAM7A-204ENST00000562729 MAP3K13O43283 966 aa12.55□□□□□ -0.4
CHRFAM7A-204ENST00000562729 PHKG2P15735 406 aa12.55□□□□□ -0.4
CHRFAM7A-204ENST00000562729 ZNF827Q17R98 1081 aa12.55□□□□□ -0.4
CHRFAM7A-204ENST00000562729 ZNF530Q6P9A1 599 aaPredicted RBP12.55□□□□□ -0.4
CHRFAM7A-204ENST00000562729 LY75O60449 1722 aa12.54□□□□□ -0.4
CHRFAM7A-204ENST00000562729 ITGB4P16144 1822 aa12.54□□□□□ -0.4
CHRFAM7A-204ENST00000562729 POTEFA5A3E0 1075 aa12.54□□□□□ -0.4
CHRFAM7A-204ENST00000562729 POLD1P28340 1107 aa12.54□□□□□ -0.4
CHRFAM7A-204ENST00000562729 PAPPAQ13219 1627 aa12.54□□□□□ -0.4
CHRFAM7A-204ENST00000562729 DIAPH1O60610 1272 aaKnown RBP12.53□□□□□ -0.4
CHRFAM7A-204ENST00000562729 NKX1-1Q15270 411 aaPredicted RBP12.53□□□□□ -0.4
CHRFAM7A-204ENST00000562729 AEBP1Q8IUX7 1158 aa12.53□□□□□ -0.4
CHRFAM7A-204ENST00000562729 KLHL34Q8N239 644 aa12.53□□□□□ -0.4
CHRFAM7A-204ENST00000562729 PIGBQ92521 554 aa12.53□□□□□ -0.4
CHRFAM7A-204ENST00000562729 AK7Q96M32 723 aa12.53□□□□□ -0.4
CHRFAM7A-204ENST00000562729 TOGARAM1Q9Y4F4 1720 aa12.53□□□□□ -0.4
CHRFAM7A-204ENST00000562729 PLEKHG2Q9H7P9 1386 aa12.53□□□□□ -0.4
CHRFAM7A-204ENST00000562729 PER1O15534 1290 aaPredicted RBP12.52□□□□□ -0.41
CHRFAM7A-204ENST00000562729 IL13P35225 146 aa12.52□□□□□ -0.41
CHRFAM7A-204ENST00000562729 CABP4P57796 275 aa12.52□□□□□ -0.41
CHRFAM7A-204ENST00000562729 DCAF5Q96JK2 942 aa12.52□□□□□ -0.41
CHRFAM7A-204ENST00000562729 CFAP53Q96M91 514 aa12.52□□□□□ -0.41
CHRFAM7A-204ENST00000562729 C5P01031 1676 aa12.51□□□□□ -0.41
CHRFAM7A-204ENST00000562729 U2SURPO15042 1029 aaKnown RBP12.51□□□□□ -0.41
CHRFAM7A-204ENST00000562729 HMOX1P09601 288 aa12.51□□□□□ -0.41
CHRFAM7A-204ENST00000562729 TIE1P35590 1138 aa12.51□□□□□ -0.41
CHRFAM7A-204ENST00000562729 SLC16A10Q8TF71 515 aa12.51□□□□□ -0.41
CHRFAM7A-204ENST00000562729 ERVV-2B6SEH9 535 aa12.5□□□□□ -0.41
CHRFAM7A-204ENST00000562729 ATP6V1AP38606 617 aa12.5□□□□□ -0.41
CHRFAM7A-204ENST00000562729 FLAD1Q8NFF5 587 aa12.5□□□□□ -0.41
CHRFAM7A-204ENST00000562729 ARXQ96QS3 562 aa12.5□□□□□ -0.41
CHRFAM7A-204ENST00000562729 PNPLA7Q6ZV29 1317 aa12.5□□□□□ -0.41
CHRFAM7A-204ENST00000562729 QSER1Q2KHR3 1735 aa12.49□□□□□ -0.41
CHRFAM7A-204ENST00000562729 NPC1L1Q9UHC9 1359 aa12.49□□□□□ -0.41
CHRFAM7A-204ENST00000562729 LOC102724428A0A0B4J2F2 783 aa12.49□□□□□ -0.41
CHRFAM7A-204ENST00000562729 PHF14O94880 888 aa12.49□□□□□ -0.41
CHRFAM7A-204ENST00000562729 PTGER2P43116 358 aa12.49□□□□□ -0.41
CHRFAM7A-204ENST00000562729 SIK1P57059 783 aa12.49□□□□□ -0.41
CHRFAM7A-204ENST00000562729 ASAP1Q9ULH1 1129 aa12.49□□□□□ -0.41
CHRFAM7A-204ENST00000562729 LCE2DQ5TA82 110 aaPredicted RBP12.48□□□□□ -0.41
CHRFAM7A-204ENST00000562729 FHDC1Q9C0D6 1143 aaPredicted RBP12.48□□□□□ -0.41
CHRFAM7A-204ENST00000562729 SCUBE2Q9NQ36 999 aa12.48□□□□□ -0.41
CHRFAM7A-204ENST00000562729 TUBGCP6Q96RT7 1819 aa12.47□□□□□ -0.41
CHRFAM7A-204ENST00000562729 ATG3Q9NT62 314 aa12.47□□□□□ -0.41
CHRFAM7A-204ENST00000562729 NUDCQ9Y266 331 aa12.47□□□□□ -0.41
CHRFAM7A-204ENST00000562729 KDRP35968 1356 aa12.46□□□□□ -0.41
CHRFAM7A-204ENST00000562729 C4BP0C0L5 1744 aa12.46□□□□□ -0.41
CHRFAM7A-204ENST00000562729 AKAP4Q5JQC9 854 aa12.46□□□□□ -0.41
CHRFAM7A-204ENST00000562729 MSL1Q68DK7 614 aa12.46□□□□□ -0.41
CHRFAM7A-204ENST00000562729 COL23A1Q86Y22 540 aaPredicted RBP12.46□□□□□ -0.41
CHRFAM7A-204ENST00000562729 TAF1LQ8IZX4 1826 aa12.46□□□□□ -0.42
CHRFAM7A-204ENST00000562729 GNPATO15228 680 aa12.45□□□□□ -0.42
CHRFAM7A-204ENST00000562729 NFATC2IPQ8NCF5 419 aa12.45□□□□□ -0.42
CHRFAM7A-204ENST00000562729 TTLL13PA6NNM8 815 aa12.44□□□□□ -0.42
CHRFAM7A-204ENST00000562729 PTCD1O75127 700 aaKnown RBP12.44□□□□□ -0.42
CHRFAM7A-204ENST00000562729 LINC00116Q8NCU8 138 aa12.44□□□□□ -0.42
CHRFAM7A-204ENST00000562729 SYT17Q9BSW7 474 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms