RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 POM121Q96HA1 1249 aa9.41□□□□□ -0.9
SMG1-206ENST00000562668 MBIPQ9NS73 344 aa9.41□□□□□ -0.9
SMG1-206ENST00000562668 A0A1B0GTH6 734 aa9.4□□□□□ -0.9
SMG1-206ENST00000562668 PHKA2P46019 1235 aa9.4□□□□□ -0.9
SMG1-206ENST00000562668 SCNN1DP51172 638 aa9.4□□□□□ -0.9
SMG1-206ENST00000562668 NUCKS1Q9H1E3 243 aaKnown RBP9.4□□□□□ -0.9
SMG1-206ENST00000562668 PIK3CDO00329 1044 aa9.39□□□□□ -0.91
SMG1-206ENST00000562668 GDF10P55107 478 aa9.39□□□□□ -0.91
SMG1-206ENST00000562668 FLIIQ13045 1269 aa9.39□□□□□ -0.91
SMG1-206ENST00000562668 C4orf17Q53FE4 359 aa9.39□□□□□ -0.91
SMG1-206ENST00000562668 RHBDD1Q8TEB9 315 aa9.39□□□□□ -0.91
SMG1-206ENST00000562668 TRERF1Q96PN7 1200 aa9.39□□□□□ -0.91
SMG1-206ENST00000562668 GPAMQ9HCL2 828 aa9.39□□□□□ -0.91
SMG1-206ENST00000562668 ADAMTS8Q9UP79 889 aa9.39□□□□□ -0.91
SMG1-206ENST00000562668 RAD21O60216 631 aa9.38□□□□□ -0.91
SMG1-206ENST00000562668 RNF225M0QZC1 329 aaPredicted RBP9.37□□□□□ -0.91
SMG1-206ENST00000562668 ARHGEF15O94989 841 aa9.37□□□□□ -0.91
SMG1-206ENST00000562668 INHAP05111 366 aa9.37□□□□□ -0.91
SMG1-206ENST00000562668 UBTFP17480 764 aaKnown RBP9.37□□□□□ -0.91
SMG1-206ENST00000562668 PPARGC1BQ86YN6 1023 aaKnown RBP9.37□□□□□ -0.91
SMG1-206ENST00000562668 ALG2Q9H553 416 aa9.37□□□□□ -0.91
SMG1-206ENST00000562668 THBS1P07996 1170 aa9.36□□□□□ -0.91
SMG1-206ENST00000562668 KCNMA1Q12791 1236 aa9.36□□□□□ -0.91
SMG1-206ENST00000562668 LYPD4Q6UWN0 246 aa9.36□□□□□ -0.91
SMG1-206ENST00000562668 IGF1RP08069 1367 aa9.36□□□□□ -0.91
SMG1-206ENST00000562668 MAP3K10Q02779 954 aa9.35□□□□□ -0.91
SMG1-206ENST00000562668 EML3Q32P44 896 aa9.35□□□□□ -0.91
SMG1-206ENST00000562668 NFATC2IPQ8NCF5 419 aa9.35□□□□□ -0.91
SMG1-206ENST00000562668 CELA2BP08218 269 aaPredicted RBP9.34□□□□□ -0.91
SMG1-206ENST00000562668 SKIP12755 728 aa9.34□□□□□ -0.91
SMG1-206ENST00000562668 PLA2G4AP47712 749 aa9.34□□□□□ -0.91
SMG1-206ENST00000562668 LBRQ14739 615 aaKnown RBP9.34□□□□□ -0.91
SMG1-206ENST00000562668 CSB-PGBD3P0DP91 1061 aa9.33□□□□□ -0.92
SMG1-206ENST00000562668 MX2P20592 715 aa9.33□□□□□ -0.92
SMG1-206ENST00000562668 MSX1P28360 303 aa9.33□□□□□ -0.92
SMG1-206ENST00000562668 PGBD3Q8N328 593 aa9.33□□□□□ -0.92
SMG1-206ENST00000562668 RUBCNLQ9H714 662 aa9.33□□□□□ -0.92
SMG1-206ENST00000562668 TMEM229AB2RXF0 380 aa9.32□□□□□ -0.92
SMG1-206ENST00000562668 GSK3AP49840 483 aa9.32□□□□□ -0.92
SMG1-206ENST00000562668 SMTNP53814 917 aa9.32□□□□□ -0.92
SMG1-206ENST00000562668 TBC1D9Q6ZT07 1266 aa9.32□□□□□ -0.92
SMG1-206ENST00000562668 NSFL1CQ9UNZ2 370 aaKnown RBP9.32□□□□□ -0.92
SMG1-206ENST00000562668 NOD1Q9Y239 953 aa9.32□□□□□ -0.92
SMG1-206ENST00000562668 POM121CA8CG34 1229 aa9.31□□□□□ -0.92
SMG1-206ENST00000562668 USP17L5A8MUK1 530 aa9.31□□□□□ -0.92
SMG1-206ENST00000562668 LZTS3O60299 673 aaPredicted RBP9.31□□□□□ -0.92
SMG1-206ENST00000562668 NCOA4Q13772 614 aa9.31□□□□□ -0.92
SMG1-206ENST00000562668 CFHR5Q9BXR6 569 aa9.31□□□□□ -0.92
SMG1-206ENST00000562668 SERTAD1Q9UHV2 236 aa9.31□□□□□ -0.92
SMG1-206ENST00000562668 PCDHGA11Q9Y5H2 935 aa9.31□□□□□ -0.92
SMG1-206ENST00000562668 GTF2IP78347 998 aa9.3□□□□□ -0.92
SMG1-206ENST00000562668 UBAP2LQ14157 1087 aaKnown RBP9.3□□□□□ -0.92
SMG1-206ENST00000562668 EFHC2Q5JST6 749 aa9.3□□□□□ -0.92
SMG1-206ENST00000562668 ADAMTS19Q8TE59 1207 aa9.3□□□□□ -0.92
SMG1-206ENST00000562668 SLC4A9Q96Q91 983 aa9.3□□□□□ -0.92
SMG1-206ENST00000562668 NIFKQ9BYG3 293 aaKnown RBP9.3□□□□□ -0.92
SMG1-206ENST00000562668 CRISPLD1Q9H336 500 aa9.3□□□□□ -0.92
SMG1-206ENST00000562668 PHF24Q9UPV7 400 aa9.3□□□□□ -0.92
SMG1-206ENST00000562668 ATP4AP20648 1035 aa9.29□□□□□ -0.92
SMG1-206ENST00000562668 MARSP56192 900 aaKnown RBP9.29□□□□□ -0.92
SMG1-206ENST00000562668 MTFR1Q15390 333 aa9.29□□□□□ -0.92
SMG1-206ENST00000562668 TMEM132AQ24JP5 1023 aa9.29□□□□□ -0.92
SMG1-206ENST00000562668 ACDQ96AP0 544 aa9.29□□□□□ -0.92
SMG1-206ENST00000562668 ENAMQ9NRM1 1142 aa9.29□□□□□ -0.92
SMG1-206ENST00000562668 ABCC9O60706 1549 aa9.29□□□□□ -0.92
SMG1-206ENST00000562668 A6NJY4 79 aa9.28□□□□□ -0.92
SMG1-206ENST00000562668 BCRP11274 1271 aa9.28□□□□□ -0.92
SMG1-206ENST00000562668 MAP2K3P46734 347 aa9.28□□□□□ -0.92
SMG1-206ENST00000562668 RASSF7Q02833 373 aa9.28□□□□□ -0.92
SMG1-206ENST00000562668 PSME1Q06323 249 aa9.28□□□□□ -0.92
SMG1-206ENST00000562668 ZNF295-AS1Q8N0V1 137 aa9.28□□□□□ -0.92
SMG1-206ENST00000562668 C1orf216Q8TAB5 229 aa9.28□□□□□ -0.92
SMG1-206ENST00000562668 ATXN7L1Q9ULK2 861 aaPredicted RBP9.28□□□□□ -0.92
SMG1-206ENST00000562668 IQSEC3Q9UPP2 1182 aaPredicted RBP9.28□□□□□ -0.92
SMG1-206ENST00000562668 DEPDC4Q8N2C3 294 aa9.27□□□□□ -0.93
SMG1-206ENST00000562668 TMEM151AQ8N4L1 468 aa9.27□□□□□ -0.93
SMG1-206ENST00000562668 CDK2AP1O14519 115 aa9.26□□□□□ -0.93
SMG1-206ENST00000562668 NBPF1Q3BBV0 1214 aa9.26□□□□□ -0.93
SMG1-206ENST00000562668 SCARF2Q96GP6 870 aaPredicted RBP9.26□□□□□ -0.93
SMG1-206ENST00000562668 ABHD17AQ96GS6 310 aa9.26□□□□□ -0.93
SMG1-206ENST00000562668 UCN2Q96RP3 112 aa9.26□□□□□ -0.93
SMG1-206ENST00000562668 OXCT2Q9BYC2 517 aaPredicted RBP9.26□□□□□ -0.93
SMG1-206ENST00000562668 LRRC4BQ9NT99 713 aa9.26□□□□□ -0.93
SMG1-206ENST00000562668 ZNF358Q9NW07 568 aa9.26□□□□□ -0.93
SMG1-206ENST00000562668 USP3Q9Y6I4 520 aa9.26□□□□□ -0.93
SMG1-206ENST00000562668 BACH1O14867 736 aa9.25□□□□□ -0.93
SMG1-206ENST00000562668 GDF11O95390 407 aa9.25□□□□□ -0.93
SMG1-206ENST00000562668 IRS1P35568 1242 aa9.25□□□□□ -0.93
SMG1-206ENST00000562668 PLEKHM2Q8IWE5 1019 aa9.25□□□□□ -0.93
SMG1-206ENST00000562668 NDFIP2Q9NV92 336 aa9.25□□□□□ -0.93
SMG1-206ENST00000562668 DNAAF2Q9NVR5 837 aaKnown RBP9.25□□□□□ -0.93
SMG1-206ENST00000562668 USP17L3A6NCW0 530 aa9.24□□□□□ -0.93
SMG1-206ENST00000562668 USP17L4A6NCW7 530 aa9.24□□□□□ -0.93
SMG1-206ENST00000562668 FIGNL1Q6PIW4 674 aa9.24□□□□□ -0.93
SMG1-206ENST00000562668 USP17L2Q6R6M4 530 aa9.24□□□□□ -0.93
SMG1-206ENST00000562668 USP17L1Q7RTZ2 530 aa9.24□□□□□ -0.93
SMG1-206ENST00000562668 TRIM50Q86XT4 487 aa9.24□□□□□ -0.93
SMG1-206ENST00000562668 AIDAQ96BJ3 306 aa9.24□□□□□ -0.93
SMG1-206ENST00000562668 ZDHHC3Q9NYG2 299 aa9.24□□□□□ -0.93
SMG1-206ENST00000562668 ATP9BO43861 1147 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms